RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 ZNF56Q15929 161 aa11.06□□□□□ -0.64
TNC-212ENST00000542877 RSPO4Q2I0M5 234 aaPredicted RBP11.06□□□□□ -0.64
TNC-212ENST00000542877 RNASEH2CQ8TDP1 164 aaKnown RBP11.06□□□□□ -0.64
TNC-212ENST00000542877 SLC25A28Q96A46 364 aa11.06□□□□□ -0.64
TNC-212ENST00000542877 C14orf144Q96I85 54 aa11.06□□□□□ -0.64
TNC-212ENST00000542877 KBTBD11-OT1A0A1B0GTJ5 212 aa11.06□□□□□ -0.64
TNC-212ENST00000542877 OR52E5Q8NH55 327 aa11.06□□□□□ -0.64
TNC-212ENST00000542877 GEMIN7Q9H840 131 aaKnown RBP11.06□□□□□ -0.64
TNC-212ENST00000542877 TBX6O95947 436 aaPredicted RBP11.06□□□□□ -0.64
TNC-212ENST00000542877 TMEM170AQ8WVE7 144 aa11.06□□□□□ -0.64
TNC-212ENST00000542877 PIMREGQ9BSJ6 248 aa11.06□□□□□ -0.64
TNC-212ENST00000542877 MRPL13Q9BYD1 178 aaKnown RBP11.06□□□□□ -0.64
TNC-212ENST00000542877 PARP14Q460N5 1801 aa11.06□□□□□ -0.64
TNC-212ENST00000542877 CECR9P0C854 216 aa11.05□□□□□ -0.64
TNC-212ENST00000542877 CCL1P22362 96 aa11.05□□□□□ -0.64
TNC-212ENST00000542877 MEIG1Q5JSS6 88 aa11.05□□□□□ -0.64
TNC-212ENST00000542877 MRPS18CQ9Y3D5 142 aaKnown RBP11.05□□□□□ -0.64
TNC-212ENST00000542877 PIKFYVEQ9Y2I7 2098 aa11.05□□□□□ -0.64
TNC-212ENST00000542877 FAM186AA6NE01 2351 aa11.05□□□□□ -0.64
TNC-212ENST00000542877 SNRPD3P62318 126 aaKnown RBP11.05□□□□□ -0.64
TNC-212ENST00000542877 CIARTQ8N365 385 aaPredicted RBP11.05□□□□□ -0.64
TNC-212ENST00000542877 PRDM13Q9H4Q3 707 aa11.05□□□□□ -0.64
TNC-212ENST00000542877 TRAV8-6A0A0B4J262 113 aa11.05□□□□□ -0.64
TNC-212ENST00000542877 TRAV24A0A0B4J272 114 aa11.05□□□□□ -0.64
TNC-212ENST00000542877 EPOPA6NHQ4 379 aa11.05□□□□□ -0.64
TNC-212ENST00000542877 MEF2CQ06413 473 aaPredicted RBP11.05□□□□□ -0.64
TNC-212ENST00000542877 FAM74A4Q5TZK3 123 aa11.05□□□□□ -0.64
TNC-212ENST00000542877 ZNF324BQ6AW86 544 aaPredicted RBP11.05□□□□□ -0.64
TNC-212ENST00000542877 TMEM106BQ9NUM4 274 aa11.05□□□□□ -0.64
TNC-212ENST00000542877 NEUROG3Q9Y4Z2 214 aa11.05□□□□□ -0.64
TNC-212ENST00000542877 LYPD3O95274 346 aa11.04□□□□□ -0.64
TNC-212ENST00000542877 WDR82Q6UXN9 313 aa11.04□□□□□ -0.64
TNC-212ENST00000542877 TCF23Q7RTU1 214 aa11.04□□□□□ -0.64
TNC-212ENST00000542877 FAM89BQ8N5H3 189 aa11.04□□□□□ -0.64
TNC-212ENST00000542877 GTF3AQ92664 365 aaKnown RBP11.04□□□□□ -0.64
TNC-212ENST00000542877 LINC00271P0C7V0 271 aa11.04□□□□□ -0.64
TNC-212ENST00000542877 TMPRSS3P57727 454 aa11.04□□□□□ -0.64
TNC-212ENST00000542877 MIR17HGQ75NE6 70 aa11.04□□□□□ -0.64
TNC-212ENST00000542877 APOBEC3AP31941 199 aaPredicted RBP11.04□□□□□ -0.64
TNC-212ENST00000542877 ATP1A1-AS1Q5TC04 95 aa11.04□□□□□ -0.64
TNC-212ENST00000542877 TMEM144Q7Z5S9 345 aa11.04□□□□□ -0.64
TNC-212ENST00000542877 SIGLEC12Q96PQ1 595 aa11.04□□□□□ -0.64
TNC-212ENST00000542877 IQCF6A8MYZ5 107 aa11.04□□□□□ -0.64
TNC-212ENST00000542877 C1QTNF9BB2RNN3 333 aa11.04□□□□□ -0.64
TNC-212ENST00000542877 NIT1Q86X76 327 aa11.04□□□□□ -0.64
TNC-212ENST00000542877 DPM3Q9P2X0 92 aa11.04□□□□□ -0.64
TNC-212ENST00000542877 H0YIZ8 118 aa11.03□□□□□ -0.64
TNC-212ENST00000542877 CELA3AP09093 270 aa11.03□□□□□ -0.64
TNC-212ENST00000542877 CCL20P78556 96 aa11.03□□□□□ -0.64
TNC-212ENST00000542877 IGHV3OR16-12A0A075B7B8 117 aa11.03□□□□□ -0.64
TNC-212ENST00000542877 FOXH1O75593 365 aa11.03□□□□□ -0.64
TNC-212ENST00000542877 EMP1P54849 157 aa11.03□□□□□ -0.64
TNC-212ENST00000542877 PSG7Q13046 419 aa11.03□□□□□ -0.64
TNC-212ENST00000542877 DMRTA1Q5VZB9 504 aa11.03□□□□□ -0.64
TNC-212ENST00000542877 RTN4RL2Q86UN3 420 aa11.03□□□□□ -0.64
TNC-212ENST00000542877 C18orf15Q96N68 181 aa11.03□□□□□ -0.64
TNC-212ENST00000542877 LINC00587B1AMM8 73 aa11.03□□□□□ -0.64
TNC-212ENST00000542877 C9orf172C9J069 976 aa11.03□□□□□ -0.64
TNC-212ENST00000542877 H7C1H1 209 aa11.03□□□□□ -0.64
TNC-212ENST00000542877 IGLV3-19P01714 112 aa11.03□□□□□ -0.64
TNC-212ENST00000542877 SRSF3P84103 164 aaKnown RBP11.03□□□□□ -0.64
TNC-212ENST00000542877 NDUFAF3Q9BU61 184 aa11.03□□□□□ -0.64
TNC-212ENST00000542877 ASIPP42127 132 aa11.03□□□□□ -0.64
TNC-212ENST00000542877 FBXL15Q9H469 300 aa11.03□□□□□ -0.64
TNC-212ENST00000542877 MRPL16Q9NX20 251 aaKnown RBP11.03□□□□□ -0.64
TNC-212ENST00000542877 C19orf67A6NJJ6 358 aa11.02□□□□□ -0.64
TNC-212ENST00000542877 TMEM170BQ5T4T1 132 aa11.02□□□□□ -0.64
TNC-212ENST00000542877 ARID2Q68CP9 1835 aa11.02□□□□□ -0.64
TNC-212ENST00000542877 ZNF236Q9UL36 1845 aa11.02□□□□□ -0.64
TNC-212ENST00000542877 CACNA1IQ9P0X4 2223 aa11.02□□□□□ -0.64
TNC-212ENST00000542877 ID3Q02535 119 aa11.02□□□□□ -0.65
TNC-212ENST00000542877 CYB5R2Q6BCY4 276 aa11.02□□□□□ -0.65
TNC-212ENST00000542877 PLPPR1Q8TBJ4 325 aa11.02□□□□□ -0.65
TNC-212ENST00000542877 IMMP1LQ96LU5 166 aa11.02□□□□□ -0.65
TNC-212ENST00000542877 DUX5Q96PT3 197 aa11.02□□□□□ -0.65
TNC-212ENST00000542877 AKIRIN1Q9H9L7 192 aaPredicted RBP11.02□□□□□ -0.65
TNC-212ENST00000542877 NRN1Q9NPD7 142 aa11.02□□□□□ -0.65
TNC-212ENST00000542877 FOXD3Q9UJU5 478 aaPredicted RBP11.02□□□□□ -0.65
TNC-212ENST00000542877 DICER1Q9UPY3 1922 aaKnown RBP11.02□□□□□ -0.65
TNC-212ENST00000542877 IGHV2OR16-5A0A0B4J2B6 119 aa11.02□□□□□ -0.65
TNC-212ENST00000542877 SERF1AO75920 110 aa11.02□□□□□ -0.65
TNC-212ENST00000542877 SP9P0CG40 484 aa11.02□□□□□ -0.65
TNC-212ENST00000542877 ORMDL3Q8N138 153 aa11.02□□□□□ -0.65
TNC-212ENST00000542877 ZNF837Q96EG3 531 aaPredicted RBP11.02□□□□□ -0.65
TNC-212ENST00000542877 WBP1Q96G27 269 aa11.02□□□□□ -0.65
TNC-212ENST00000542877 FOXA2Q9Y261 457 aaPredicted RBP11.02□□□□□ -0.65
TNC-212ENST00000542877 LINC00312Q9Y6C7 94 aa11.02□□□□□ -0.65
TNC-212ENST00000542877 IGHV3-35A0A0C4DH35 117 aa11.02□□□□□ -0.65
TNC-212ENST00000542877 IGKV1-9A0A0C4DH69 117 aa11.02□□□□□ -0.65
TNC-212ENST00000542877 FAM216BQ8N7L0 139 aa11.02□□□□□ -0.65
TNC-212ENST00000542877 C21orf62Q9NYP8 219 aa11.02□□□□□ -0.65
TNC-212ENST00000542877 OTOFQ9HC10 1997 aa11.02□□□□□ -0.65
TNC-212ENST00000542877 ICE1Q9Y2F5 2266 aa11.02□□□□□ -0.65
TNC-212ENST00000542877 IGKV1D-13A0A0B4J2D9 117 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 UBE2CO00762 179 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 CEACAM4O75871 244 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 IGKV1-13P0DP09 117 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 PDLIM4P50479 330 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 LY6EQ16553 131 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 NPFFO15130 113 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms