RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, human

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-223	ENST00000542552	TRAPPC2B	P0DI82	140 aa		11.81	□□□□□ -0.52
ECHDC2-223	ENST00000542552	WT1-AS	Q06250	92 aa		11.81	□□□□□ -0.52
ECHDC2-223	ENST00000542552	FAM209B	Q5JX69	171 aa		11.81	□□□□□ -0.52
ECHDC2-223	ENST00000542552	FAAP20	Q6NZ36	180 aa		11.81	□□□□□ -0.52
ECHDC2-223	ENST00000542552	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.81	□□□□□ -0.52
ECHDC2-223	ENST00000542552	OR4C16	Q8NGL9	310 aa		11.81	□□□□□ -0.52
ECHDC2-223	ENST00000542552	OR1L8	Q8NGR8	309 aa		11.81	□□□□□ -0.52
ECHDC2-223	ENST00000542552	OR13C8	Q8NGS7	320 aa		11.81	□□□□□ -0.52
ECHDC2-223	ENST00000542552	ZFAND1	Q8TCF1	268 aa		11.81	□□□□□ -0.52
ECHDC2-223	ENST00000542552	PRR25	Q96S07	402 aa		11.81	□□□□□ -0.52
ECHDC2-223	ENST00000542552	PRND	Q9UKY0	176 aa		11.81	□□□□□ -0.52
ECHDC2-223	ENST00000542552	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.81	□□□□□ -0.52
ECHDC2-223	ENST00000542552	NSG2	Q9Y328	171 aa		11.81	□□□□□ -0.52
ECHDC2-223	ENST00000542552	LSM4	Q9Y4Z0	139 aa	Known RBP	11.81	□□□□□ -0.52
ECHDC2-223	ENST00000542552	CCDC160	A6NGH7	325 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	DBX1	A6NMT0	343 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	C15orf61	A6NNL5	157 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552		H0Y980	276 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	SNAPC5	O75971	98 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	SERPINE2	P07093	398 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	CTSD	P07339	412 aa	Predicted RBP	11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	AKAIN1	P0CW23	69 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	PPP5C	P53041	499 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	SYNJ2BP	P57105	145 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	SCGB2B2	Q4G0G5	96 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	DEFB121	Q5J5C9	76 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	OR9G4	Q8NGQ1	327 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	MARCH1	Q8TCQ1	289 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	OR4C12	Q96R67	309 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	TP53RK	Q96S44	253 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	TSC22D3	Q99576	134 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	ELOVL1	Q9BW60	279 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	FKBP11	Q9NYL4	201 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	OR51B2	Q9Y5P1	312 aa		11.8	□□□□□ -0.52
ECHDC2-223	ENST00000542552	DISC1	C4P0D8	188 aa		11.79	□□□□□ -0.52
ECHDC2-223	ENST00000542552	IGLV1-51	P01701	117 aa		11.79	□□□□□ -0.52
ECHDC2-223	ENST00000542552		P0C879	139 aa		11.79	□□□□□ -0.52
ECHDC2-223	ENST00000542552	DEFA4	P12838	97 aa		11.79	□□□□□ -0.52
ECHDC2-223	ENST00000542552	DCTN2	Q13561	401 aa	Known RBP	11.79	□□□□□ -0.52
ECHDC2-223	ENST00000542552	SURF2	Q15527	256 aa	Predicted RBP	11.79	□□□□□ -0.52
ECHDC2-223	ENST00000542552	RPEL1	Q2QD12	228 aa		11.79	□□□□□ -0.52
ECHDC2-223	ENST00000542552	GDPD1	Q8N9F7	314 aa		11.79	□□□□□ -0.52
ECHDC2-223	ENST00000542552	OR6Q1	Q8NGQ2	317 aa		11.79	□□□□□ -0.52
ECHDC2-223	ENST00000542552	OR5B3	Q8NH48	314 aa		11.79	□□□□□ -0.52
ECHDC2-223	ENST00000542552	CCDC140	Q96MF4	163 aa		11.79	□□□□□ -0.52
ECHDC2-223	ENST00000542552	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.79	□□□□□ -0.52
ECHDC2-223	ENST00000542552	SLC2A8	Q9NY64	477 aa		11.79	□□□□□ -0.52
ECHDC2-223	ENST00000542552	SIGLEC8	Q9NYZ4	499 aa		11.79	□□□□□ -0.52
ECHDC2-223	ENST00000542552		V9GYH0	126 aa		11.79	□□□□□ -0.52
ECHDC2-223	ENST00000542552	C3orf85	A0A1B0GTC6	90 aa		11.78	□□□□□ -0.52
ECHDC2-223	ENST00000542552	IGKV1-5	P01602	117 aa		11.78	□□□□□ -0.52
ECHDC2-223	ENST00000542552	OR13C7	P0DN81	318 aa		11.78	□□□□□ -0.52
ECHDC2-223	ENST00000542552	SPN	P16150	400 aa		11.78	□□□□□ -0.52
ECHDC2-223	ENST00000542552	TATDN3	Q17R31	274 aa		11.78	□□□□□ -0.52
ECHDC2-223	ENST00000542552	H2BFWT	Q7Z2G1	175 aa		11.78	□□□□□ -0.52
ECHDC2-223	ENST00000542552	CCDC71L	Q8N9Z2	235 aa		11.78	□□□□□ -0.52
ECHDC2-223	ENST00000542552	LSM10	Q969L4	123 aa	Known RBP	11.78	□□□□□ -0.52
ECHDC2-223	ENST00000542552	PRRT1	Q99946	306 aa		11.78	□□□□□ -0.52
ECHDC2-223	ENST00000542552	COPZ2	Q9P299	210 aa		11.78	□□□□□ -0.52
ECHDC2-223	ENST00000542552	GPR132	Q9UNW8	380 aa		11.78	□□□□□ -0.52
ECHDC2-223	ENST00000542552	MFSD2B	A6NFX1	497 aa		11.77	□□□□□ -0.53
ECHDC2-223	ENST00000542552	PPP5D1	E7EU14	171 aa		11.77	□□□□□ -0.53
ECHDC2-223	ENST00000542552	B3GALNT1	O75752	331 aa		11.77	□□□□□ -0.53
ECHDC2-223	ENST00000542552	CSN3	P07498	182 aa		11.77	□□□□□ -0.53
ECHDC2-223	ENST00000542552	UCP1	P25874	307 aa		11.77	□□□□□ -0.53
ECHDC2-223	ENST00000542552	MFAP2	P55001	183 aa		11.77	□□□□□ -0.53
ECHDC2-223	ENST00000542552	CCDC190	Q86UF4	302 aa		11.77	□□□□□ -0.53
ECHDC2-223	ENST00000542552	OR51S1	Q8NGJ8	323 aa		11.77	□□□□□ -0.53
ECHDC2-223	ENST00000542552	EEF1AKMT3	Q96AZ1	226 aa		11.77	□□□□□ -0.53
ECHDC2-223	ENST00000542552	CXorf58	Q96LI9	332 aa		11.77	□□□□□ -0.53
ECHDC2-223	ENST00000542552	B9D2	Q9BPU9	175 aa		11.77	□□□□□ -0.53
ECHDC2-223	ENST00000542552	THAP7	Q9BT49	309 aa	Predicted RBP	11.77	□□□□□ -0.53
ECHDC2-223	ENST00000542552	C5orf66	Q9H5L9	145 aa		11.77	□□□□□ -0.53
ECHDC2-223	ENST00000542552	F11R	Q9Y624	299 aa	Known RBP	11.77	□□□□□ -0.53
ECHDC2-223	ENST00000542552	TRBV7-1	A0A0A6YYK4	115 aa		11.76	□□□□□ -0.53
ECHDC2-223	ENST00000542552	GGCT	O75223	188 aa	Known RBP	11.76	□□□□□ -0.53
ECHDC2-223	ENST00000542552	IGHV3-23	P01764	117 aa		11.76	□□□□□ -0.53
ECHDC2-223	ENST00000542552	MECP2	P51608	486 aa	Known RBP	11.76	□□□□□ -0.53
ECHDC2-223	ENST00000542552	SP6	Q3SY56	376 aa		11.76	□□□□□ -0.53
ECHDC2-223	ENST00000542552	GPHB5	Q86YW7	130 aa		11.76	□□□□□ -0.53
ECHDC2-223	ENST00000542552	OR4A16	Q8NH70	328 aa		11.76	□□□□□ -0.53
ECHDC2-223	ENST00000542552	ZNF502	Q8TBZ5	544 aa		11.76	□□□□□ -0.53
ECHDC2-223	ENST00000542552	TRIM63	Q969Q1	353 aa		11.76	□□□□□ -0.53
ECHDC2-223	ENST00000542552	TMEM56	Q96MV1	263 aa		11.76	□□□□□ -0.53
ECHDC2-223	ENST00000542552	HINT2	Q9BX68	163 aa		11.76	□□□□□ -0.53
ECHDC2-223	ENST00000542552	THYN1	Q9P016	225 aa		11.76	□□□□□ -0.53
ECHDC2-223	ENST00000542552		S4R3C0	116 aa		11.76	□□□□□ -0.53
ECHDC2-223	ENST00000542552		A0A0B4J293	547 aa		11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	CYB5B	O43169	146 aa		11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	CDS2	O95674	445 aa		11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	HLA-A	P01891	365 aa	Known RBP	11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	GP9	P14770	177 aa		11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	S100A5	P33763	92 aa		11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	ETV6	P41212	452 aa		11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	HSPE1	P61604	102 aa	Known RBP	11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	PRCD	Q00LT1	54 aa		11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	KLF9	Q13886	244 aa	Predicted RBP	11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	ZNF79	Q15937	498 aa		11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	IZUMO4	Q1ZYL8	232 aa		11.75	□□□□□ -0.53
ECHDC2-223	ENST00000542552	CLEC19A	Q6UXS0	136 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms