RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 SNRNP40Q96DI7 357 aaKnown RBP13.44□□□□□ -0.26
VARS2-212ENST00000542001 NABP2Q9BQ15 211 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 C2CD3Q4AC94 2353 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 HIST1H2BKO60814 126 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 HIST1H2BJP06899 126 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 HIST1H2BOP23527 126 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 HIST1H2BBP33778 126 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 NUBP1P53384 320 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 HIST1H2BDP58876 126 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 HIST1H2BCP62807 126 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 ELOBQ15370 118 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 HIST2H2BEQ16778 126 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.44□□□□□ -0.26
VARS2-212ENST00000542001 PCSK4Q6UW60 755 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 OR1P1Q8NH06 330 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 HIST1H2BHQ93079 126 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 HIST1H2BNQ99877 126 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 HIST1H2BMQ99879 126 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 MRPL37Q9BZE1 423 aaKnown RBP13.44□□□□□ -0.26
VARS2-212ENST00000542001 IQCF6A8MYZ5 107 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 CCL21O00585 134 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 ZNF25P17030 456 aaPredicted RBP13.44□□□□□ -0.26
VARS2-212ENST00000542001 LTBP2Q14767 1821 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 A0A1W2PN81 502 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 DLX1P56177 255 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 RPL23P62829 140 aaKnown RBP13.43□□□□□ -0.26
VARS2-212ENST00000542001 HLA-DRB5Q30154 266 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 SDF2L1Q9HCN8 221 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 DCAF16Q9NXF7 216 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 CLEC5AQ9NY25 188 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 NRN1LQ496H8 165 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 LYPD6Q86Y78 171 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 TMEM167BQ9NRX6 74 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 TNFRSF19Q9NS68 423 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 METTL1Q9UBP6 276 aaKnown RBP13.43□□□□□ -0.26
VARS2-212ENST00000542001 SONP18583 2426 aaKnown RBP13.43□□□□□ -0.26
VARS2-212ENST00000542001 IGHV3OR16-13A0A075B7E8 117 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 IGHV3-74A0A0B4J1X5 117 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 IL6RP08887 468 aaPredicted RBP13.43□□□□□ -0.26
VARS2-212ENST00000542001 GLRXP35754 106 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 KIR2DS2P43631 304 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 MLANAQ16655 118 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 MIR17HGQ75NE6 70 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 OR10W1Q8NGF6 305 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 LOXL4Q96JB6 756 aa13.43□□□□□ -0.26
VARS2-212ENST00000542001 ELOA3CA0A087WX78 387 aaPredicted RBP13.42□□□□□ -0.26
VARS2-212ENST00000542001 FAM90A26D6RGX4 464 aa13.42□□□□□ -0.26
VARS2-212ENST00000542001 SCGB2A1O75556 95 aa13.42□□□□□ -0.26
VARS2-212ENST00000542001 COQ2Q96H96 371 aa13.42□□□□□ -0.26
VARS2-212ENST00000542001 NOL4LQ96MY1 436 aaPredicted RBP13.42□□□□□ -0.26
VARS2-212ENST00000542001 PSMG3Q9BT73 122 aaPredicted RBP13.42□□□□□ -0.26
VARS2-212ENST00000542001 PAXXQ9BUH6 204 aa13.42□□□□□ -0.26
VARS2-212ENST00000542001 IDI2-AS1Q9NZ38 188 aa13.42□□□□□ -0.26
VARS2-212ENST00000542001 SAA2-SAA4A0A096LPE2 208 aa13.42□□□□□ -0.26
VARS2-212ENST00000542001 PGPA6NDG6 321 aa13.42□□□□□ -0.26
VARS2-212ENST00000542001 ZNF883P0CG24 379 aa13.42□□□□□ -0.26
VARS2-212ENST00000542001 SAA2P0DJI9 122 aaPredicted RBP13.42□□□□□ -0.26
VARS2-212ENST00000542001 ZNF585BQ52M93 769 aa13.42□□□□□ -0.26
VARS2-212ENST00000542001 FOXL2NBQ6ZUU3 175 aa13.42□□□□□ -0.26
VARS2-212ENST00000542001 CD177Q8N6Q3 437 aa13.42□□□□□ -0.26
VARS2-212ENST00000542001 FGF23Q9GZV9 251 aaPredicted RBP13.42□□□□□ -0.26
VARS2-212ENST00000542001 IL19Q9UHD0 177 aa13.42□□□□□ -0.26
VARS2-212ENST00000542001 JPT1Q9UK76 154 aa13.42□□□□□ -0.26
VARS2-212ENST00000542001 MRPS18CQ9Y3D5 142 aaKnown RBP13.42□□□□□ -0.26
VARS2-212ENST00000542001 K7EQM0 130 aa13.41□□□□□ -0.26
VARS2-212ENST00000542001 Q6P435 159 aa13.41□□□□□ -0.26
VARS2-212ENST00000542001 WDR86Q86TI4 376 aa13.41□□□□□ -0.26
VARS2-212ENST00000542001 OR2T6Q8NHC8 308 aa13.41□□□□□ -0.26
VARS2-212ENST00000542001 TMUB1Q9BVT8 246 aa13.41□□□□□ -0.26
VARS2-212ENST00000542001 CBLN4Q9NTU7 201 aa13.41□□□□□ -0.26
VARS2-212ENST00000542001 PLA2G2EQ9NZK7 142 aa13.41□□□□□ -0.26
VARS2-212ENST00000542001 CD40P25942 277 aa13.41□□□□□ -0.26
VARS2-212ENST00000542001 GCHFRP30047 84 aa13.41□□□□□ -0.26
VARS2-212ENST00000542001 CSN1S1P47710 185 aa13.41□□□□□ -0.26
VARS2-212ENST00000542001 MORN2Q502X0 79 aa13.41□□□□□ -0.26
VARS2-212ENST00000542001 ATG101Q9BSB4 218 aa13.41□□□□□ -0.26
VARS2-212ENST00000542001 CD81P60033 236 aa13.41□□□□□ -0.26
VARS2-212ENST00000542001 BSPH1Q075Z2 132 aa13.41□□□□□ -0.26
VARS2-212ENST00000542001 SPATA31B1PQ5VZV4 182 aa13.41□□□□□ -0.26
VARS2-212ENST00000542001 ETFRF1Q6IPR1 90 aa13.41□□□□□ -0.26
VARS2-212ENST00000542001 SEBOXQ9HB31 216 aaPredicted RBP13.41□□□□□ -0.26
VARS2-212ENST00000542001 MUC21A0A0G2JKD1 596 aa13.4□□□□□ -0.26
VARS2-212ENST00000542001 MUC21A0A140T8X8 626 aa13.4□□□□□ -0.26
VARS2-212ENST00000542001 COL8A1P27658 744 aa13.4□□□□□ -0.26
VARS2-212ENST00000542001 MUC21Q5SSG8 566 aa13.4□□□□□ -0.26
VARS2-212ENST00000542001 SPSB3Q6PJ21 355 aa13.4□□□□□ -0.26
VARS2-212ENST00000542001 PAX6P26367 422 aa13.4□□□□□ -0.26
VARS2-212ENST00000542001 LEMD1Q68G75 181 aa13.4□□□□□ -0.26
VARS2-212ENST00000542001 C1QL4Q86Z23 238 aa13.4□□□□□ -0.26
VARS2-212ENST00000542001 VSTM2AQ8TAG5 236 aa13.4□□□□□ -0.26
VARS2-212ENST00000542001 MRPL20Q9BYC9 149 aaKnown RBP13.4□□□□□ -0.26
VARS2-212ENST00000542001 CA1P00915 261 aaPredicted RBP13.4□□□□□ -0.26
VARS2-212ENST00000542001 DUX4L9Q6RFH8 374 aaPredicted RBP13.4□□□□□ -0.26
VARS2-212ENST00000542001 OR9G1Q8NH87 305 aa13.4□□□□□ -0.26
VARS2-212ENST00000542001 DUTP33316 252 aaKnown RBP13.39□□□□□ -0.27
VARS2-212ENST00000542001 PRRX1P54821 245 aa13.39□□□□□ -0.27
VARS2-212ENST00000542001 CENPWQ5EE01 88 aa13.39□□□□□ -0.27
VARS2-212ENST00000542001 HEPN1Q6WQI6 88 aa13.39□□□□□ -0.27
VARS2-212ENST00000542001 CYP2G1PQ6ZSU1 146 aa13.39□□□□□ -0.27
VARS2-212ENST00000542001 MDS2Q8NDY4 140 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms