RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 PRSS46E5RG02 174 aa14.08□□□□□ -0.15
SPIDR-227ENST00000541342 MGST3O14880 152 aa14.08□□□□□ -0.15
SPIDR-227ENST00000541342 CD99P14209 185 aa14.08□□□□□ -0.15
SPIDR-227ENST00000541342 ADORA2A-AS1P86434 159 aa14.08□□□□□ -0.15
SPIDR-227ENST00000541342 TMEM256Q8N2U0 113 aa14.08□□□□□ -0.15
SPIDR-227ENST00000541342 TMEM18Q96B42 140 aa14.08□□□□□ -0.15
SPIDR-227ENST00000541342 PLPPR2Q96GM1 343 aa14.08□□□□□ -0.15
SPIDR-227ENST00000541342 NBASA2RRP1 2371 aa14.08□□□□□ -0.16
SPIDR-227ENST00000541342 CACNA1AO00555 2505 aa14.08□□□□□ -0.16
SPIDR-227ENST00000541342 CST9LP1Q5W188 147 aa14.08□□□□□ -0.16
SPIDR-227ENST00000541342 STUMQ69YW2 141 aa14.08□□□□□ -0.16
SPIDR-227ENST00000541342 KCNIP4Q6PIL6 250 aa14.08□□□□□ -0.16
SPIDR-227ENST00000541342 TCTEX1D1Q8N7M0 179 aa14.08□□□□□ -0.16
SPIDR-227ENST00000541342 R3HDM4Q96D70 268 aa14.08□□□□□ -0.16
SPIDR-227ENST00000541342 C1orf159Q96HA4 380 aa14.08□□□□□ -0.16
SPIDR-227ENST00000541342 PXMP4Q9Y6I8 212 aa14.08□□□□□ -0.16
SPIDR-227ENST00000541342 E7EQL1 145 aa14.08□□□□□ -0.16
SPIDR-227ENST00000541342 EREGO14944 169 aa14.08□□□□□ -0.16
SPIDR-227ENST00000541342 ADH4P08319 380 aa14.08□□□□□ -0.16
SPIDR-227ENST00000541342 TREML4Q6UXN2 200 aa14.08□□□□□ -0.16
SPIDR-227ENST00000541342 LINC01560Q8TB33 94 aa14.08□□□□□ -0.16
SPIDR-227ENST00000541342 HSD17B10Q99714 261 aaKnown RBP14.08□□□□□ -0.16
SPIDR-227ENST00000541342 TMEM204Q9BSN7 226 aa14.08□□□□□ -0.16
SPIDR-227ENST00000541342 KCNIP2Q9NS61 270 aa14.08□□□□□ -0.16
SPIDR-227ENST00000541342 RRHO14718 337 aa14.07□□□□□ -0.16
SPIDR-227ENST00000541342 CHRNB4P30926 498 aa14.07□□□□□ -0.16
SPIDR-227ENST00000541342 TEX38Q6PEX7 206 aa14.07□□□□□ -0.16
SPIDR-227ENST00000541342 BEND2Q8NDZ0 799 aa14.07□□□□□ -0.16
SPIDR-227ENST00000541342 DEFB108BQ8NET1 73 aa14.07□□□□□ -0.16
SPIDR-227ENST00000541342 ARL14EPLP0DKL9 152 aa14.07□□□□□ -0.16
SPIDR-227ENST00000541342 DUTP33316 252 aaKnown RBP14.07□□□□□ -0.16
SPIDR-227ENST00000541342 FBXL19-AS1Q494R0 122 aa14.07□□□□□ -0.16
SPIDR-227ENST00000541342 TCF23Q7RTU1 214 aa14.07□□□□□ -0.16
SPIDR-227ENST00000541342 VKORC1L1Q8N0U8 176 aa14.07□□□□□ -0.16
SPIDR-227ENST00000541342 MGST2Q99735 147 aa14.07□□□□□ -0.16
SPIDR-227ENST00000541342 NGBQ9NPG2 151 aa14.07□□□□□ -0.16
SPIDR-227ENST00000541342 TANC2Q9HCD6 1990 aa14.07□□□□□ -0.16
SPIDR-227ENST00000541342 PKDREJQ9NTG1 2253 aa14.07□□□□□ -0.16
SPIDR-227ENST00000541342 LRBAP50851 2863 aa14.07□□□□□ -0.16
SPIDR-227ENST00000541342 A0A0U1RQK1 487 aa14.07□□□□□ -0.16
SPIDR-227ENST00000541342 ZNF320A2RRD8 509 aa14.07□□□□□ -0.16
SPIDR-227ENST00000541342 FOXL1Q12952 345 aa14.07□□□□□ -0.16
SPIDR-227ENST00000541342 CR1LQ2VPA4 569 aa14.07□□□□□ -0.16
SPIDR-227ENST00000541342 LBHQ53QV2 105 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-227ENST00000541342 MRPL41Q8IXM3 137 aaKnown RBP14.07□□□□□ -0.16
SPIDR-227ENST00000541342 LTC4SQ16873 150 aa14.06□□□□□ -0.16
SPIDR-227ENST00000541342 SDSLQ96GA7 329 aa14.06□□□□□ -0.16
SPIDR-227ENST00000541342 SFRP2Q96HF1 295 aa14.06□□□□□ -0.16
SPIDR-227ENST00000541342 GAFA1Q96PS6 74 aa14.06□□□□□ -0.16
SPIDR-227ENST00000541342 TRAPPC1Q9Y5R8 145 aa14.06□□□□□ -0.16
SPIDR-227ENST00000541342 PPP1R35Q8TAP8 253 aa14.06□□□□□ -0.16
SPIDR-227ENST00000541342 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.05□□□□□ -0.16
SPIDR-227ENST00000541342 RAB4BP61018 213 aa14.05□□□□□ -0.16
SPIDR-227ENST00000541342 HTD2P86397 168 aa14.05□□□□□ -0.16
SPIDR-227ENST00000541342 TRAT1Q6PIZ9 186 aa14.05□□□□□ -0.16
SPIDR-227ENST00000541342 SGMS2Q8NHU3 365 aa14.05□□□□□ -0.16
SPIDR-227ENST00000541342 RNASE6Q93091 150 aaKnown RBP14.05□□□□□ -0.16
SPIDR-227ENST00000541342 IMMP2LQ96T52 175 aa14.05□□□□□ -0.16
SPIDR-227ENST00000541342 COL6A6A6NMZ7 2263 aa14.05□□□□□ -0.16
SPIDR-227ENST00000541342 TRAV3A0A0B4J244 114 aa14.05□□□□□ -0.16
SPIDR-227ENST00000541342 SPINT2O43291 252 aa14.05□□□□□ -0.16
SPIDR-227ENST00000541342 PLAUP00749 431 aa14.05□□□□□ -0.16
SPIDR-227ENST00000541342 VDAC2P45880 294 aaPredicted RBP14.05□□□□□ -0.16
SPIDR-227ENST00000541342 TGIF2LXQ8IUE1 241 aa14.05□□□□□ -0.16
SPIDR-227ENST00000541342 CCL13Q99616 98 aa14.05□□□□□ -0.16
SPIDR-227ENST00000541342 GGTLC1Q9BX51 225 aa14.05□□□□□ -0.16
SPIDR-227ENST00000541342 MS4A5Q9H3V2 200 aa14.05□□□□□ -0.16
SPIDR-227ENST00000541342 SCO2A0A1W2PP80 73 aa14.05□□□□□ -0.16
SPIDR-227ENST00000541342 SIAH2O43255 324 aa14.05□□□□□ -0.16
SPIDR-227ENST00000541342 FCGR3BO75015 233 aa14.05□□□□□ -0.16
SPIDR-227ENST00000541342 TEX36Q5VZQ5 186 aa14.05□□□□□ -0.16
SPIDR-227ENST00000541342 TNFRSF1AP19438 455 aa14.04□□□□□ -0.16
SPIDR-227ENST00000541342 OPRK1P41145 380 aa14.04□□□□□ -0.16
SPIDR-227ENST00000541342 UTF1Q5T230 341 aa14.04□□□□□ -0.16
SPIDR-227ENST00000541342 MIC13Q5XKP0 118 aa14.04□□□□□ -0.16
SPIDR-227ENST00000541342 FAM216BQ8N7L0 139 aa14.04□□□□□ -0.16
SPIDR-227ENST00000541342 STAG3L2P0CL84 134 aa14.04□□□□□ -0.16
SPIDR-227ENST00000541342 STAG3L3P0CL85 134 aa14.04□□□□□ -0.16
SPIDR-227ENST00000541342 C1orf229Q6ZS94 237 aaPredicted RBP14.04□□□□□ -0.16
SPIDR-227ENST00000541342 TP53TG3Q9ULZ0 132 aa14.04□□□□□ -0.16
SPIDR-227ENST00000541342 POLR3KQ9Y2Y1 108 aaPredicted RBP14.04□□□□□ -0.16
SPIDR-227ENST00000541342 YTHDF2Q9Y5A9 579 aaKnown RBP14.04□□□□□ -0.16
SPIDR-227ENST00000541342 ARFGEF3Q5TH69 2177 aa14.04□□□□□ -0.16
SPIDR-227ENST00000541342 DCHS2Q6V1P9 2916 aa14.04□□□□□ -0.16
SPIDR-227ENST00000541342 A0A1W2PPV4 95 aa14.03□□□□□ -0.16
SPIDR-227ENST00000541342 IRF2P14316 349 aa14.03□□□□□ -0.16
SPIDR-227ENST00000541342 LINC00310P59036 64 aa14.03□□□□□ -0.16
SPIDR-227ENST00000541342 IQCJQ1A5X6 159 aa14.03□□□□□ -0.16
SPIDR-227ENST00000541342 ZNF788Q6ZQV5 615 aa14.03□□□□□ -0.16
SPIDR-227ENST00000541342 F6UZH7 168 aa14.03□□□□□ -0.16
SPIDR-227ENST00000541342 CGB3P0DN86 165 aa14.03□□□□□ -0.16
SPIDR-227ENST00000541342 CGB7P0DN87 165 aa14.03□□□□□ -0.16
SPIDR-227ENST00000541342 ADMP35318 185 aa14.03□□□□□ -0.16
SPIDR-227ENST00000541342 ZNF134P52741 427 aa14.03□□□□□ -0.16
SPIDR-227ENST00000541342 LOXL3P58215 753 aa14.03□□□□□ -0.16
SPIDR-227ENST00000541342 SAP30LQ9HAJ7 183 aa14.03□□□□□ -0.16
SPIDR-227ENST00000541342 HNF1AP20823 631 aa14.03□□□□□ -0.16
SPIDR-227ENST00000541342 SPCS3P61009 180 aa14.03□□□□□ -0.16
SPIDR-227ENST00000541342 USF2Q15853 346 aaPredicted RBP14.03□□□□□ -0.16
SPIDR-227ENST00000541342 RPL39P5Q59GN2 51 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms