RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 IL6RP08887 468 aaPredicted RBP11.9□□□□□ -0.51
SFSWAP-210ENST00000541286 RPL30P62888 115 aaKnown RBP11.9□□□□□ -0.51
SFSWAP-210ENST00000541286 GABRA6Q16445 453 aa11.9□□□□□ -0.51
SFSWAP-210ENST00000541286 PRAMEF6Q5VXH4 476 aa11.9□□□□□ -0.51
SFSWAP-210ENST00000541286 CYP2G1PQ6ZSU1 146 aa11.9□□□□□ -0.51
SFSWAP-210ENST00000541286 Q8NFD4 153 aa11.9□□□□□ -0.51
SFSWAP-210ENST00000541286 A8MXE2 369 aa11.89□□□□□ -0.51
SFSWAP-210ENST00000541286 SLC17A3O00476 420 aa11.89□□□□□ -0.51
SFSWAP-210ENST00000541286 S1PR2O95136 353 aa11.89□□□□□ -0.51
SFSWAP-210ENST00000541286 NPPCP23582 126 aa11.89□□□□□ -0.51
SFSWAP-210ENST00000541286 TFF3Q07654 80 aa11.89□□□□□ -0.51
SFSWAP-210ENST00000541286 Q6ZS49 121 aa11.89□□□□□ -0.51
SFSWAP-210ENST00000541286 BCL2L2Q92843 193 aaPredicted RBP11.89□□□□□ -0.51
SFSWAP-210ENST00000541286 LINC00470Q9BZP3 86 aa11.89□□□□□ -0.51
SFSWAP-210ENST00000541286 PLSCR4Q9NRQ2 329 aa11.89□□□□□ -0.51
SFSWAP-210ENST00000541286 NDUFB4O95168 129 aa11.89□□□□□ -0.51
SFSWAP-210ENST00000541286 RBX1P62877 108 aa11.89□□□□□ -0.51
SFSWAP-210ENST00000541286 LRRC75BQ2VPJ9 315 aa11.89□□□□□ -0.51
SFSWAP-210ENST00000541286 Q6P435 159 aa11.89□□□□□ -0.51
SFSWAP-210ENST00000541286 ACSM6Q6P461 480 aa11.89□□□□□ -0.51
SFSWAP-210ENST00000541286 WFDC8Q8IUA0 241 aa11.89□□□□□ -0.51
SFSWAP-210ENST00000541286 WDR31Q8NA23 367 aa11.89□□□□□ -0.51
SFSWAP-210ENST00000541286 GALMQ96C23 342 aa11.89□□□□□ -0.51
SFSWAP-210ENST00000541286 A1L4Q6 167 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 OR5G3P0C626 314 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 LINC00614P0C842 121 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 SSTR5P35346 364 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 ACOT6Q3I5F7 207 aaPredicted RBP11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 COA6Q5JTJ3 125 aaKnown RBP11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 Q6ZN92 141 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 OR10G4Q8NGN3 311 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 OR10G9Q8NGN4 311 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 OR10G7Q8NGN6 311 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 C17orf98A8MV24 154 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 HAND1O96004 215 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 PMCHP20382 165 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 TIMP3P35625 211 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 RBPJQ06330 500 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 OR8G5Q8NG78 346 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 NANOS1Q8WY41 292 aaKnown RBP11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 PSG11Q9UQ72 335 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 C19orf84I3L1E1 186 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 NDUFB8O95169 186 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 ATP5G3P48201 142 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 PDLIM4P50479 330 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 COL5A1-AS1Q5SY13 56 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 TPTE2P1Q5T6R2 138 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 C22orf15Q8WYQ4 148 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 NEUROG1Q92886 237 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 SLC35E1Q96K37 410 aa11.88□□□□□ -0.51
SFSWAP-210ENST00000541286 ZANQ9Y493 2812 aa11.87□□□□□ -0.51
SFSWAP-210ENST00000541286 M0QZK8 103 aa11.87□□□□□ -0.51
SFSWAP-210ENST00000541286 GGCTO75223 188 aaKnown RBP11.87□□□□□ -0.51
SFSWAP-210ENST00000541286 EDDM3BP56851 147 aa11.87□□□□□ -0.51
SFSWAP-210ENST00000541286 OR10P1Q8NGE3 313 aa11.87□□□□□ -0.51
SFSWAP-210ENST00000541286 ZC2HC1AQ96GY0 325 aa11.87□□□□□ -0.51
SFSWAP-210ENST00000541286 PYGO2Q9BRQ0 406 aa11.87□□□□□ -0.51
SFSWAP-210ENST00000541286 POLDIP2Q9Y2S7 368 aa11.87□□□□□ -0.51
SFSWAP-210ENST00000541286 ZFHX3Q15911 3703 aa11.87□□□□□ -0.51
SFSWAP-210ENST00000541286 ODAMA1E959 279 aa11.87□□□□□ -0.51
SFSWAP-210ENST00000541286 C12orf77C9JDV5 145 aa11.87□□□□□ -0.51
SFSWAP-210ENST00000541286 M0R1B8 84 aa11.87□□□□□ -0.51
SFSWAP-210ENST00000541286 MPV17P39210 176 aa11.87□□□□□ -0.51
SFSWAP-210ENST00000541286 H2BFWTQ7Z2G1 175 aa11.87□□□□□ -0.51
SFSWAP-210ENST00000541286 VKORC1L1Q8N0U8 176 aa11.87□□□□□ -0.51
SFSWAP-210ENST00000541286 TP53TG3Q9ULZ0 132 aa11.87□□□□□ -0.51
SFSWAP-210ENST00000541286 TMEM183BQ1AE95 376 aa11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 HIST2H2BCQ6DN03 193 aa11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 KCNIP4Q6PIL6 250 aa11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 ZNF497Q6ZNH5 498 aa11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 BHLHA15Q7RTS1 189 aaPredicted RBP11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 LYG1Q8N1E2 194 aa11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 FAM19A2Q8N3H0 131 aa11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 TRAV38-1A0A0B4J264 116 aa11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 C11orf94C9JXX5 98 aa11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 HBZP02008 142 aa11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 PSG7Q13046 419 aa11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 GAGE1Q13065 139 aa11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 NRN1LQ496H8 165 aa11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 ZFP30Q9Y2G7 519 aa11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 RBFOX2O43251 390 aaKnown RBP eCLIP11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 COL8A1P27658 744 aa11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 MSMO1Q15800 293 aa11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 SPATA45Q537H7 98 aa11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 ZCCHC24Q8N2G6 241 aaKnown RBP11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 LSM10Q969L4 123 aaKnown RBP11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 VKORC1Q9BQB6 163 aa11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 METRNQ9UJH8 293 aa11.86□□□□□ -0.51
SFSWAP-210ENST00000541286 IER3P46695 156 aa11.85□□□□□ -0.51
SFSWAP-210ENST00000541286 SERF2P84101 59 aa11.85□□□□□ -0.51
SFSWAP-210ENST00000541286 MSMPQ1L6U9 139 aa11.85□□□□□ -0.51
SFSWAP-210ENST00000541286 HINT2Q9BX68 163 aa11.85□□□□□ -0.51
SFSWAP-210ENST00000541286 TIMM8AO60220 97 aaPredicted RBP11.85□□□□□ -0.51
SFSWAP-210ENST00000541286 CRISP2P16562 243 aa11.85□□□□□ -0.51
SFSWAP-210ENST00000541286 NTF3P20783 257 aa11.85□□□□□ -0.51
SFSWAP-210ENST00000541286 TGIF2LYQ8IUE0 185 aa11.85□□□□□ -0.51
SFSWAP-210ENST00000541286 OR5AU1Q8NGC0 362 aa11.85□□□□□ -0.51
SFSWAP-210ENST00000541286 DUSP13Q9UII6 198 aa11.85□□□□□ -0.51
SFSWAP-210ENST00000541286 FBXL7Q9UJT9 491 aa11.85□□□□□ -0.51
SFSWAP-210ENST00000541286 SMPD2O60906 423 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms