RNA–Protein interactions for RNA: ENST00000540925.5

USP28-209, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 4

Gene USP28, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-209ENST00000540925 DPPA5A6NC42 116 aa10.81□□□□□ -0.68
USP28-209ENST00000540925 GSTZ1O43708 216 aaPredicted RBP10.81□□□□□ -0.68
USP28-209ENST00000540925 DHFRP00374 187 aa10.81□□□□□ -0.68
USP28-209ENST00000540925 IFNA6P05013 189 aa10.81□□□□□ -0.68
USP28-209ENST00000540925 CSN3P07498 182 aa10.81□□□□□ -0.68
USP28-209ENST00000540925 P0C879 139 aa10.81□□□□□ -0.68
USP28-209ENST00000540925 HIST1H1BP16401 226 aaKnown RBP10.81□□□□□ -0.68
USP28-209ENST00000540925 RPEL1Q2QD12 228 aa10.81□□□□□ -0.68
USP28-209ENST00000540925 STEAP1BQ6NZ63 245 aa10.81□□□□□ -0.68
USP28-209ENST00000540925 ADAMTSL5Q6ZMM2 481 aa10.81□□□□□ -0.68
USP28-209ENST00000540925 OR1L8Q8NGR8 309 aa10.81□□□□□ -0.68
USP28-209ENST00000540925 OR4C12Q96R67 309 aa10.81□□□□□ -0.68
USP28-209ENST00000540925 ELOVL1Q9BW60 279 aa10.81□□□□□ -0.68
USP28-209ENST00000540925 C15orf61A6NNL5 157 aa10.8□□□□□ -0.68
USP28-209ENST00000540925 H0Y980 276 aa10.8□□□□□ -0.68
USP28-209ENST00000540925 RAB3DO95716 219 aa10.8□□□□□ -0.68
USP28-209ENST00000540925 SERPINE2P07093 398 aa10.8□□□□□ -0.68
USP28-209ENST00000540925 TRAPPC2P0DI81 140 aa10.8□□□□□ -0.68
USP28-209ENST00000540925 TRAPPC2BP0DI82 140 aa10.8□□□□□ -0.68
USP28-209ENST00000540925 GP9P14770 177 aa10.8□□□□□ -0.68
USP28-209ENST00000540925 PI3P19957 117 aa10.8□□□□□ -0.68
USP28-209ENST00000540925 S100GP29377 79 aa10.8□□□□□ -0.68
USP28-209ENST00000540925 TNFSF8P32971 234 aa10.8□□□□□ -0.68
USP28-209ENST00000540925 MFAP2P55001 183 aa10.8□□□□□ -0.68
USP28-209ENST00000540925 PIGPP57054 158 aa10.8□□□□□ -0.68
USP28-209ENST00000540925 HSD17B13Q7Z5P4 300 aaPredicted RBP10.8□□□□□ -0.68
USP28-209ENST00000540925 HAPLN4Q86UW8 402 aa10.8□□□□□ -0.68
USP28-209ENST00000540925 GDPD1Q8N9F7 314 aa10.8□□□□□ -0.68
USP28-209ENST00000540925 OR5B3Q8NH48 314 aa10.8□□□□□ -0.68
USP28-209ENST00000540925 THAP7Q9BT49 309 aaPredicted RBP10.8□□□□□ -0.68
USP28-209ENST00000540925 PRNDQ9UKY0 176 aa10.8□□□□□ -0.68
USP28-209ENST00000540925 NSG2Q9Y328 171 aa10.8□□□□□ -0.68
USP28-209ENST00000540925 OR51B2Q9Y5P1 312 aa10.8□□□□□ -0.68
USP28-209ENST00000540925 ANKRD20A5PA0PJZ0 165 aa10.79□□□□□ -0.68
USP28-209ENST00000540925 MFSD2BA6NFX1 497 aa10.79□□□□□ -0.68
USP28-209ENST00000540925 PPP5D1E7EU14 171 aa10.79□□□□□ -0.68
USP28-209ENST00000540925 NOL3O60936 208 aaKnown RBP10.79□□□□□ -0.68
USP28-209ENST00000540925 IL18Q14116 193 aa10.79□□□□□ -0.68
USP28-209ENST00000540925 MEF2DQ14814 521 aa10.79□□□□□ -0.68
USP28-209ENST00000540925 FAAP20Q6NZ36 180 aa10.79□□□□□ -0.68
USP28-209ENST00000540925 OR4C16Q8NGL9 310 aa10.79□□□□□ -0.68
USP28-209ENST00000540925 OR13C8Q8NGS7 320 aa10.79□□□□□ -0.68
USP28-209ENST00000540925 ZNF502Q8TBZ5 544 aa10.79□□□□□ -0.68
USP28-209ENST00000540925 TP53RKQ96S44 253 aa10.79□□□□□ -0.68
USP28-209ENST00000540925 TSC22D3Q99576 134 aa10.79□□□□□ -0.68
USP28-209ENST00000540925 C6orf62Q9GZU0 229 aaPredicted RBP10.79□□□□□ -0.68
USP28-209ENST00000540925 LGALS9O00182 355 aa10.78□□□□□ -0.68
USP28-209ENST00000540925 GGCTO75223 188 aaKnown RBP10.78□□□□□ -0.68
USP28-209ENST00000540925 IGKV1-5P01602 117 aa10.78□□□□□ -0.68
USP28-209ENST00000540925 CTSDP07339 412 aaPredicted RBP10.78□□□□□ -0.68
USP28-209ENST00000540925 OR13C7P0DN81 318 aa10.78□□□□□ -0.68
USP28-209ENST00000540925 PGAM2P15259 253 aa10.78□□□□□ -0.68
USP28-209ENST00000540925 PPP5CP53041 499 aa10.78□□□□□ -0.68
USP28-209ENST00000540925 GPHB5Q86YW7 130 aa10.78□□□□□ -0.68
USP28-209ENST00000540925 MCFD2Q8NI22 146 aa10.78□□□□□ -0.68
USP28-209ENST00000540925 MARCH1Q8TCQ1 289 aa10.78□□□□□ -0.68
USP28-209ENST00000540925 LSM10Q969L4 123 aaKnown RBP10.78□□□□□ -0.68
USP28-209ENST00000540925 RTBDNQ9BSG5 229 aaPredicted RBP10.78□□□□□ -0.68
USP28-209ENST00000540925 SLC2A8Q9NY64 477 aa10.78□□□□□ -0.68
USP28-209ENST00000540925 FKBP11Q9NYL4 201 aa10.78□□□□□ -0.68
USP28-209ENST00000540925 RSL24D1Q9UHA3 163 aaKnown RBP10.78□□□□□ -0.68
USP28-209ENST00000540925 F11RQ9Y624 299 aaKnown RBP10.78□□□□□ -0.68
USP28-209ENST00000540925 TRBV7-1A0A0A6YYK4 115 aa10.77□□□□□ -0.69
USP28-209ENST00000540925 ZNF701M0R085 212 aaPredicted RBP10.77□□□□□ -0.69
USP28-209ENST00000540925 SNAPC5O75971 98 aa10.77□□□□□ -0.69
USP28-209ENST00000540925 LY86O95711 162 aa10.77□□□□□ -0.69
USP28-209ENST00000540925 IGHV3-23P01764 117 aa10.77□□□□□ -0.69
USP28-209ENST00000540925 HLA-AP01891 365 aaKnown RBP10.77□□□□□ -0.69
USP28-209ENST00000540925 DEFA4P12838 97 aa10.77□□□□□ -0.69
USP28-209ENST00000540925 UCP1P25874 307 aa10.77□□□□□ -0.69
USP28-209ENST00000540925 CD69Q07108 199 aa10.77□□□□□ -0.69
USP28-209ENST00000540925 SURF2Q15527 256 aaPredicted RBP10.77□□□□□ -0.69
USP28-209ENST00000540925 TATDN3Q17R31 274 aa10.77□□□□□ -0.69
USP28-209ENST00000540925 C11orf87Q6NUJ2 197 aa10.77□□□□□ -0.69
USP28-209ENST00000540925 CLEC19AQ6UXS0 136 aa10.77□□□□□ -0.69
USP28-209ENST00000540925 Q8N1Y9 231 aa10.77□□□□□ -0.69
USP28-209ENST00000540925 ZFAND1Q8TCF1 268 aa10.77□□□□□ -0.69
USP28-209ENST00000540925 VN1R17PQ8TDU5 208 aa10.77□□□□□ -0.69
USP28-209ENST00000540925 EEF1AKMT3Q96AZ1 226 aa10.77□□□□□ -0.69
USP28-209ENST00000540925 CXorf58Q96LI9 332 aa10.77□□□□□ -0.69
USP28-209ENST00000540925 PEMTQ9UBM1 199 aa10.77□□□□□ -0.69
USP28-209ENST00000540925 S4R3C0 116 aa10.77□□□□□ -0.69
USP28-209ENST00000540925 C3orf85A0A1B0GTC6 90 aa10.76□□□□□ -0.69
USP28-209ENST00000540925 F8W735 103 aaPredicted RBP10.76□□□□□ -0.69
USP28-209ENST00000540925 B3GALNT1O75752 331 aa10.76□□□□□ -0.69
USP28-209ENST00000540925 OR2C1O95371 312 aa10.76□□□□□ -0.69
USP28-209ENST00000540925 AKAIN1P0CW23 69 aa10.76□□□□□ -0.69
USP28-209ENST00000540925 ARL3P36405 182 aa10.76□□□□□ -0.69
USP28-209ENST00000540925 PRCDQ00LT1 54 aa10.76□□□□□ -0.69
USP28-209ENST00000540925 SCGB2B2Q4G0G5 96 aa10.76□□□□□ -0.69
USP28-209ENST00000540925 H2BFWTQ7Z2G1 175 aa10.76□□□□□ -0.69
USP28-209ENST00000540925 ZNF114Q8NC26 417 aa10.76□□□□□ -0.69
USP28-209ENST00000540925 C5orf66Q9H5L9 145 aa10.76□□□□□ -0.69
USP28-209ENST00000540925 GPR132Q9UNW8 380 aa10.76□□□□□ -0.69
USP28-209ENST00000540925 SMAD5-AS1Q9Y6J3 95 aa10.76□□□□□ -0.69
USP28-209ENST00000540925 V9GYH0 126 aa10.76□□□□□ -0.69
USP28-209ENST00000540925 STAB2Q8WWQ8 2551 aa10.76□□□□□ -0.69
USP28-209ENST00000540925 A0A0B4J293 547 aa10.75□□□□□ -0.69
USP28-209ENST00000540925 FABP12A6NFH5 140 aa10.75□□□□□ -0.69
USP28-209ENST00000540925 C2orf70A6NJV1 201 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms