RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 S4R3C0 116 aa3.28□□□□□ -1.88
SNHG1-214ENST00000540865 IGLV11-55A0A075B6I3 123 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 TRAV8-7A0A075B6U6 113 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 IGHV3-35A0A0C4DH35 117 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 IGKV1-6A0A0C4DH72 117 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 TRBV5-5A0A0J9YX44 114 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 TCRBV3S1A0A5B6 114 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 MFSD2BA6NFX1 497 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 SAC3D1A6NKF1 404 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 G3V2T6 193 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 RHODO00212 210 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 NDUFA4O00483 81 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 TGOLN2O43493 480 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 DCTN3O75935 186 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 DFFBO76075 338 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 CRYZL1O95825 349 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 GIG44P09565 113 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-214ENST00000540865 ZNF735P0CB33 412 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 UBBP0CG47 229 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 SAA1P0DJI8 122 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-214ENST00000540865 SPP1P10451 314 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 AREGP15514 252 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 RPA2P15927 270 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 GPR183P32249 361 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 MAS1LP35410 378 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 POLR2IP36954 125 aaKnown RBP3.27□□□□□ -1.89
SNHG1-214ENST00000540865 RPL27AP46776 148 aaKnown RBP3.27□□□□□ -1.89
SNHG1-214ENST00000540865 SERPINB10P48595 397 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 GTF2A1P52655 376 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-214ENST00000540865 PAFAH1B2P68402 229 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 PXDC1Q5TGL8 231 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 RPL22L1Q6P5R6 122 aaKnown RBP3.27□□□□□ -1.89
SNHG1-214ENST00000540865 SPSB3Q6PJ21 355 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 ZNF767PQ75MW2 155 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 SSX9Q7RTT3 188 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 SPATA24Q86W54 205 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 STHQ8IWL8 128 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 FRZBQ92765 325 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 ORAI1Q96D31 301 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 BSCL2Q96G97 398 aaPredicted RBP3.27□□□□□ -1.89
SNHG1-214ENST00000540865 CMTM3Q96MX0 182 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 OR2A7Q96R45 310 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 RNF2Q99496 336 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 CIB1Q99828 191 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 UQCC2Q9BRT2 126 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 NICN1Q9BSH3 213 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 SCRT1Q9BWW7 348 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 OR2D2Q9H210 308 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 OR51E2Q9H255 320 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 Q9N2K0 584 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 SMPXQ9UHP9 88 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 TBC1D24Q9ULP9 559 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 PKHD1L1Q86WI1 4243 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 LRP2P98164 4655 aa3.27□□□□□ -1.89
SNHG1-214ENST00000540865 TRBV5-7A0A0A0MS05 114 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 TRAV2A0A0B4J234 112 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 NBDYA0A0U1RRE5 68 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 A0A1B0GW64 132 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 C15orf62A8K5M9 175 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 TRDCB7Z8K6 153 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 E7EUB6 86 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 CHEK1O14757 476 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 OGG1O15527 345 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 CD5P06127 495 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 DEFA4P12838 97 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 SRMP19623 302 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 HTR2CP28335 458 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 DUTP33316 252 aaKnown RBP3.26□□□□□ -1.89
SNHG1-214ENST00000540865 TFPI2P48307 235 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 PSMD7P51665 324 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 RPS27AP62979 156 aaKnown RBP3.26□□□□□ -1.89
SNHG1-214ENST00000540865 VAMP2P63027 116 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 ARFRP1Q13795 201 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 ATP6AP1Q15904 470 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 SSX1Q16384 188 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 Q499Y3 187 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 SERTAD4-AS1Q5TG53 156 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 OR2G6Q5TZ20 316 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 Q5VSD8 79 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 LYPD1Q8N2G4 141 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 OR4A4PQ8NGN8 299 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 VSTM2AQ8TAG5 236 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 TMEM167AQ8TBQ9 72 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 VN1R17PQ8TDU5 208 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 GIMAP1Q8WWP7 306 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 SMIM19Q96E16 107 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 C5orf30Q96GV9 206 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 ATP6V0BQ99437 205 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 C20orf24Q9BUV8 137 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 RHPN1-AS1Q9BWJ2 59 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 TM2D1Q9BX74 207 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 CTDSP1Q9GZU7 261 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 C12orf4Q9NQ89 552 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 TMEM14BQ9NUH8 114 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 PLEKHJ1Q9NW61 149 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 THYN1Q9P016 225 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 AK3Q9UIJ7 227 aa3.26□□□□□ -1.89
SNHG1-214ENST00000540865 A0A0A0MQY5 61 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 TRBV6-7A0A0A0MS04 114 aa3.25□□□□□ -1.89
SNHG1-214ENST00000540865 IGHV7-4-1A0A0J9YVY3 117 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms