RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 TMEM14BQ9NUH8 114 aa12.1□□□□□ -0.47
DDB1-218ENST00000540784 COA4Q9NYJ1 87 aa12.1□□□□□ -0.47
DDB1-218ENST00000540784 A0A0B4J2A0 478 aa12.09□□□□□ -0.47
DDB1-218ENST00000540784 A0A1B0GW64 132 aa12.09□□□□□ -0.47
DDB1-218ENST00000540784 CGB1A6NKQ9 187 aa12.09□□□□□ -0.47
DDB1-218ENST00000540784 DBX1A6NMT0 343 aa12.09□□□□□ -0.47
DDB1-218ENST00000540784 H3BUA1 57 aa12.09□□□□□ -0.47
DDB1-218ENST00000540784 CDX1P47902 265 aaPredicted RBP12.09□□□□□ -0.47
DDB1-218ENST00000540784 HSPE1P61604 102 aaKnown RBP12.09□□□□□ -0.47
DDB1-218ENST00000540784 RPL23AP62750 156 aaKnown RBP12.09□□□□□ -0.47
DDB1-218ENST00000540784 C2orf68Q2NKX9 166 aa12.09□□□□□ -0.47
DDB1-218ENST00000540784 ANKRD55Q3KP44 614 aa12.09□□□□□ -0.47
DDB1-218ENST00000540784 THOC7Q6I9Y2 204 aaKnown RBP12.09□□□□□ -0.47
DDB1-218ENST00000540784 SLA2Q9H6Q3 261 aa12.09□□□□□ -0.47
DDB1-218ENST00000540784 NDUFA4L2Q9NRX3 87 aa12.09□□□□□ -0.47
DDB1-218ENST00000540784 NUDT15Q9NV35 164 aa12.09□□□□□ -0.47
DDB1-218ENST00000540784 SHPKQ9UHJ6 478 aa12.09□□□□□ -0.47
DDB1-218ENST00000540784 ZNF257Q9Y2Q1 563 aa12.09□□□□□ -0.47
DDB1-218ENST00000540784 A0A0G2JRQ6 117 aa12.08□□□□□ -0.48
DDB1-218ENST00000540784 ADARB2-AS1A8MUL3 147 aa12.08□□□□□ -0.48
DDB1-218ENST00000540784 NUDT19A8MXV4 375 aa12.08□□□□□ -0.48
DDB1-218ENST00000540784 BRI3O95415 125 aa12.08□□□□□ -0.48
DDB1-218ENST00000540784 IFNA17P01571 189 aa12.08□□□□□ -0.48
DDB1-218ENST00000540784 HLA-AP01891 365 aaKnown RBP12.08□□□□□ -0.48
DDB1-218ENST00000540784 TRGV3P03979 118 aa12.08□□□□□ -0.48
DDB1-218ENST00000540784 AREGP15514 252 aa12.08□□□□□ -0.48
DDB1-218ENST00000540784 PSMB6P28072 239 aa12.08□□□□□ -0.48
DDB1-218ENST00000540784 TPPP2P59282 170 aa12.08□□□□□ -0.48
DDB1-218ENST00000540784 KIAA0141Q14154 515 aaPredicted RBP12.08□□□□□ -0.48
DDB1-218ENST00000540784 Q6ZRM9 215 aa12.08□□□□□ -0.48
DDB1-218ENST00000540784 HSD17B13Q7Z5P4 300 aaPredicted RBP12.08□□□□□ -0.48
DDB1-218ENST00000540784 LYG2Q86SG7 212 aa12.08□□□□□ -0.48
DDB1-218ENST00000540784 ZNF429Q86V71 674 aa12.08□□□□□ -0.48
DDB1-218ENST00000540784 ZNF491Q8N8L2 437 aa12.08□□□□□ -0.48
DDB1-218ENST00000540784 LRTM2Q8N967 370 aa12.08□□□□□ -0.48
DDB1-218ENST00000540784 DUSP18Q8NEJ0 188 aa12.08□□□□□ -0.48
DDB1-218ENST00000540784 OR10W1Q8NGF6 305 aa12.08□□□□□ -0.48
DDB1-218ENST00000540784 UBE2E2Q96LR5 201 aa12.08□□□□□ -0.48
DDB1-218ENST00000540784 PDCD10Q9BUL8 212 aa12.08□□□□□ -0.48
DDB1-218ENST00000540784 DUXBA0A1W2PPF3 345 aa12.07□□□□□ -0.48
DDB1-218ENST00000540784 NPIPB5A8MRT5 1133 aa12.07□□□□□ -0.48
DDB1-218ENST00000540784 DUS4LO95620 317 aaKnown RBP12.07□□□□□ -0.48
DDB1-218ENST00000540784 DHFRP00374 187 aa12.07□□□□□ -0.48
DDB1-218ENST00000540784 CRYGCP07315 174 aa12.07□□□□□ -0.48
DDB1-218ENST00000540784 OR13C7P0DN81 318 aa12.07□□□□□ -0.48
DDB1-218ENST00000540784 DEFA4P12838 97 aa12.07□□□□□ -0.48
DDB1-218ENST00000540784 MECP2P51608 486 aaKnown RBP12.07□□□□□ -0.48
DDB1-218ENST00000540784 DHRS2Q13268 280 aa12.07□□□□□ -0.48
DDB1-218ENST00000540784 NRARPQ7Z6K4 114 aa12.07□□□□□ -0.48
DDB1-218ENST00000540784 MRPL41Q8IXM3 137 aaKnown RBP12.07□□□□□ -0.48
DDB1-218ENST00000540784 KLHL30-AS1Q8NEE0 82 aa12.07□□□□□ -0.48
DDB1-218ENST00000540784 OR4F17Q8NGA8 305 aa12.07□□□□□ -0.48
DDB1-218ENST00000540784 COQ8AQ8NI60 647 aa12.07□□□□□ -0.48
DDB1-218ENST00000540784 OR4F4Q96R69 305 aa12.07□□□□□ -0.48
DDB1-218ENST00000540784 CACNG5Q9UF02 275 aa12.07□□□□□ -0.48
DDB1-218ENST00000540784 TNCP24821 2201 aa12.07□□□□□ -0.48
DDB1-218ENST00000540784 A0A0G2JLM5 398 aa12.06□□□□□ -0.48
DDB1-218ENST00000540784 IGLC7A0M8Q6 106 aa12.06□□□□□ -0.48
DDB1-218ENST00000540784 ST8SIA3O43173 380 aa12.06□□□□□ -0.48
DDB1-218ENST00000540784 PRH1P02810 166 aa12.06□□□□□ -0.48
DDB1-218ENST00000540784 REG1AP05451 166 aa12.06□□□□□ -0.48
DDB1-218ENST00000540784 SULT1A3P0DMM9 295 aa12.06□□□□□ -0.48
DDB1-218ENST00000540784 SULT1A4P0DMN0 295 aa12.06□□□□□ -0.48
DDB1-218ENST00000540784 CTRB1P17538 263 aa12.06□□□□□ -0.48
DDB1-218ENST00000540784 CTRB2Q6GPI1 263 aa12.06□□□□□ -0.48
DDB1-218ENST00000540784 MYOZ3Q8TDC0 251 aa12.06□□□□□ -0.48
DDB1-218ENST00000540784 CACFD1Q9UGQ2 172 aa12.06□□□□□ -0.48
DDB1-218ENST00000540784 TMED3Q9Y3Q3 217 aa12.06□□□□□ -0.48
DDB1-218ENST00000540784 A0A1B0GU03 582 aa12.05□□□□□ -0.48
DDB1-218ENST00000540784 C13orf42A0A1B0GVH6 325 aa12.05□□□□□ -0.48
DDB1-218ENST00000540784 CYB5BO43169 146 aa12.05□□□□□ -0.48
DDB1-218ENST00000540784 HOXB5P09067 269 aa12.05□□□□□ -0.48
DDB1-218ENST00000540784 ERHP84090 104 aaKnown RBP12.05□□□□□ -0.48
DDB1-218ENST00000540784 PRCDQ00LT1 54 aa12.05□□□□□ -0.48
DDB1-218ENST00000540784 WT1-ASQ06250 92 aa12.05□□□□□ -0.48
DDB1-218ENST00000540784 SMCO1Q147U7 214 aa12.05□□□□□ -0.48
DDB1-218ENST00000540784 NMSQ5H8A3 153 aa12.05□□□□□ -0.48
DDB1-218ENST00000540784 PLET1Q6UQ28 207 aa12.05□□□□□ -0.48
DDB1-218ENST00000540784 C18orf65Q6ZTR6 163 aa12.05□□□□□ -0.48
DDB1-218ENST00000540784 USMG5Q96IX5 58 aa12.05□□□□□ -0.48
DDB1-218ENST00000540784 PLEKHA3Q9HB20 300 aa12.05□□□□□ -0.48
DDB1-218ENST00000540784 TSPAN15O95858 294 aa12.04□□□□□ -0.48
DDB1-218ENST00000540784 IFNA21P01568 189 aa12.04□□□□□ -0.48
DDB1-218ENST00000540784 HIST1H1BP16401 226 aaKnown RBP12.04□□□□□ -0.48
DDB1-218ENST00000540784 SPCS3P61009 180 aa12.04□□□□□ -0.48
DDB1-218ENST00000540784 RHOGP84095 191 aa12.04□□□□□ -0.48
DDB1-218ENST00000540784 ATP5G2Q06055 141 aa12.04□□□□□ -0.48
DDB1-218ENST00000540784 C8orf86Q6ZUL3 223 aa12.04□□□□□ -0.48
DDB1-218ENST00000540784 NECAP1Q8NC96 275 aa12.04□□□□□ -0.48
DDB1-218ENST00000540784 OR52B4Q8NGK2 314 aa12.04□□□□□ -0.48
DDB1-218ENST00000540784 OR52E5Q8NH55 327 aa12.04□□□□□ -0.48
DDB1-218ENST00000540784 MITD1Q8WV92 249 aa12.04□□□□□ -0.48
DDB1-218ENST00000540784 C4orf3Q8WVX3 66 aa12.04□□□□□ -0.48
DDB1-218ENST00000540784 OR5B12Q96R08 314 aa12.04□□□□□ -0.48
DDB1-218ENST00000540784 GNB4Q9HAV0 340 aa12.04□□□□□ -0.48
DDB1-218ENST00000540784 ENY2Q9NPA8 101 aa12.04□□□□□ -0.48
DDB1-218ENST00000540784 TET2Q6N021 2002 aaPredicted RBP12.04□□□□□ -0.48
DDB1-218ENST00000540784 ANK2Q01484 3957 aa12.04□□□□□ -0.48
DDB1-218ENST00000540784 TRBV9A0A0B4J1U6 114 aa12.03□□□□□ -0.48
DDB1-218ENST00000540784 FAM223BA6NKX1 122 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms