RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 TMEM14BQ9NUH8 114 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 WSB1Q9Y6I7 421 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 TNCP24821 2201 aa8.43□□□□□ -1.06
ATL3-204ENST00000540699 IGSF23A1L1A6 192 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 TMEM89A2RUT3 159 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 FAM24AA6NFZ4 105 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 WRBO00258 174 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 MED6O75586 246 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 KBTBD11O94819 623 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 CRYGBP07316 175 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 FGF2P09038 288 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 NUP62P37198 522 aaPredicted RBP8.42□□□□□ -1.06
ATL3-204ENST00000540699 LGALS7P47929 136 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 COMPP49747 757 aaPredicted RBP8.42□□□□□ -1.06
ATL3-204ENST00000540699 RPS16P62249 146 aaKnown RBP8.42□□□□□ -1.06
ATL3-204ENST00000540699 LY6EQ16553 131 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 MRGPRG-AS1Q2M3A8 158 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 MOB3BQ86TA1 216 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 SLC51BQ86UW2 128 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 Q8N6K4 173 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 TMEM252Q8N6L7 170 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 OR4A16Q8NH70 328 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 OR4A5Q8NH83 315 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 TMEM167AQ8TBQ9 72 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 BSCL2Q96G97 398 aaPredicted RBP8.42□□□□□ -1.06
ATL3-204ENST00000540699 RNF5Q99942 180 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 ARPC5LQ9BPX5 153 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 TNFRSF19Q9NS68 423 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 C1RLQ9NZP8 487 aa8.42□□□□□ -1.06
ATL3-204ENST00000540699 KANTRA0A1W2PQU2 76 aa8.41□□□□□ -1.06
ATL3-204ENST00000540699 TSC22D2O75157 780 aa8.41□□□□□ -1.06
ATL3-204ENST00000540699 TSPAN9O75954 239 aa8.41□□□□□ -1.06
ATL3-204ENST00000540699 CFDP00746 253 aaPredicted RBP8.41□□□□□ -1.06
ATL3-204ENST00000540699 SNRNP70P08621 437 aaKnown RBP8.41□□□□□ -1.06
ATL3-204ENST00000540699 FAM106CPP0CH98 169 aa8.41□□□□□ -1.06
ATL3-204ENST00000540699 IAPPP10997 89 aa8.41□□□□□ -1.06
ATL3-204ENST00000540699 VDAC2P45880 294 aaPredicted RBP8.41□□□□□ -1.06
ATL3-204ENST00000540699 SPCS3P61009 180 aa8.41□□□□□ -1.06
ATL3-204ENST00000540699 VAMP2P63027 116 aa8.41□□□□□ -1.06
ATL3-204ENST00000540699 EWSR1Q01844 656 aaKnown RBP eCLIP8.41□□□□□ -1.06
ATL3-204ENST00000540699 VSTM2AQ8TAG5 236 aa8.41□□□□□ -1.06
ATL3-204ENST00000540699 STOML3Q8TAV4 291 aa8.41□□□□□ -1.06
ATL3-204ENST00000540699 DTD1Q8TEA8 209 aa8.41□□□□□ -1.06
ATL3-204ENST00000540699 RBM14Q96PK6 669 aaKnown RBP8.41□□□□□ -1.06
ATL3-204ENST00000540699 FBXL17Q9UF56 701 aa8.41□□□□□ -1.06
ATL3-204ENST00000540699 CACFD1Q9UGQ2 172 aa8.41□□□□□ -1.06
ATL3-204ENST00000540699 PRNDQ9UKY0 176 aa8.41□□□□□ -1.06
ATL3-204ENST00000540699 ZNF257Q9Y2Q1 563 aa8.41□□□□□ -1.06
ATL3-204ENST00000540699 TAAR5O14804 337 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 RBMXL2O75526 392 aaKnown RBP8.4□□□□□ -1.06
ATL3-204ENST00000540699 SPDEFO95238 335 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 IGKV1D-33P01593 117 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 IGKV1-33P01594 117 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 MYOD1P15172 320 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 CD24P25063 80 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 CNTFRP26992 372 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 CAV2P51636 162 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 HSPE1P61604 102 aaKnown RBP8.4□□□□□ -1.06
ATL3-204ENST00000540699 RPL23AP62750 156 aaKnown RBP8.4□□□□□ -1.06
ATL3-204ENST00000540699 NHLH2Q02577 135 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 BAXQ07812 192 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 PSG5Q15238 335 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 VMA21Q3ZAQ7 101 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 TEX261Q6UWH6 196 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 TMEM14EPQ6UXP3 125 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 Q6ZSV7 163 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 TMEM219Q86XT9 240 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 Q8N2B8 174 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 STPG2Q8N412 459 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 TEX45Q8NA69 505 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 EAF1Q96JC9 268 aaPredicted RBP8.4□□□□□ -1.06
ATL3-204ENST00000540699 CIB3Q96Q77 187 aaPredicted RBP8.4□□□□□ -1.06
ATL3-204ENST00000540699 TSNAXQ99598 290 aaKnown RBP8.4□□□□□ -1.06
ATL3-204ENST00000540699 SLC25A31Q9H0C2 315 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 C16orf95Q9H693 158 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 WFDC1Q9HC57 220 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 TPSG1Q9NRR2 321 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 PSENENQ9NZ42 101 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 OR51B2Q9Y5P1 312 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 U3KQ87 197 aa8.4□□□□□ -1.06
ATL3-204ENST00000540699 PLXNB1O43157 2135 aa8.39□□□□□ -1.07
ATL3-204ENST00000540699 PMS2P5A8MQ11 134 aa8.39□□□□□ -1.07
ATL3-204ENST00000540699 H3BP45 60 aa8.39□□□□□ -1.07
ATL3-204ENST00000540699 FGF16O43320 207 aa8.39□□□□□ -1.07
ATL3-204ENST00000540699 SLC25A17O43808 307 aa8.39□□□□□ -1.07
ATL3-204ENST00000540699 NDUFA3O95167 84 aa8.39□□□□□ -1.07
ATL3-204ENST00000540699 LY86O95711 162 aa8.39□□□□□ -1.07
ATL3-204ENST00000540699 MOSP00540 346 aa8.39□□□□□ -1.07
ATL3-204ENST00000540699 IFNA17P01571 189 aa8.39□□□□□ -1.07
ATL3-204ENST00000540699 AMY1AP04745 511 aa8.39□□□□□ -1.07
ATL3-204ENST00000540699 CRYBA1P05813 215 aa8.39□□□□□ -1.07
ATL3-204ENST00000540699 RPL8P62917 257 aaKnown RBP8.39□□□□□ -1.07
ATL3-204ENST00000540699 PRCDQ00LT1 54 aa8.39□□□□□ -1.07
ATL3-204ENST00000540699 FOXL1Q12952 345 aa8.39□□□□□ -1.07
ATL3-204ENST00000540699 SPINK9Q5DT21 86 aa8.39□□□□□ -1.07
ATL3-204ENST00000540699 ZNF767PQ75MW2 155 aa8.39□□□□□ -1.07
ATL3-204ENST00000540699 HAPLN4Q86UW8 402 aa8.39□□□□□ -1.07
ATL3-204ENST00000540699 ZNF680Q8NEM1 530 aa8.39□□□□□ -1.07
ATL3-204ENST00000540699 NPBQ8NG41 125 aa8.39□□□□□ -1.07
ATL3-204ENST00000540699 OR2T10Q8NGZ9 312 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms