RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 ATP23Q9Y6H3 246 aa6.26□□□□□ -1.41
NECAP1-204ENST00000540083 USP9XQ93008 2570 aaPredicted RBP6.26□□□□□ -1.41
NECAP1-204ENST00000540083 ANKHD1Q8IWZ3 2542 aaKnown RBP6.25□□□□□ -1.41
NECAP1-204ENST00000540083 FLNCQ14315 2725 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 A0A1W2PR80 420 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 C5orf49A4QMS7 147 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 TMEM189A5PLL7 270 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 B9A039 149 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 C22orf46C9J442 243 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 NPIPB6E9PJ23 425 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 M0R1X1 148 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 SYNGR3O43761 229 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 SRSF10O75494 262 aaKnown RBP6.25□□□□□ -1.41
NECAP1-204ENST00000540083 GPX1P07203 203 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 H2BFMP0C1H6 154 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 LINC00869P0C866 280 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 PPIAL4GP0DN37 164 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 PSMB3P49720 205 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 FABP6P51161 128 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 ZNF718Q3SXZ3 478 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 TDRG1Q3Y452 100 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 STUMQ69YW2 141 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 UFSP1Q6NVU6 142 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 TMEM256Q8N2U0 113 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 TMEM252Q8N6L7 170 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 OR10P1Q8NGE3 313 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 OR51A4Q8NGJ6 313 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 SGMS2Q8NHU3 365 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 PLPPR1Q8TBJ4 325 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 TMEM171Q8WVE6 324 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 APOBEC3DQ96AK3 386 aaPredicted RBP6.25□□□□□ -1.41
NECAP1-204ENST00000540083 SFRP2Q96HF1 295 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 UHRF2Q96PU4 802 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 RSG1Q9BU20 258 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 PKIBQ9C010 78 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 CENPMQ9NSP4 180 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 LHFPL6Q9Y693 200 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 LY96Q9Y6Y9 160 aa6.25□□□□□ -1.41
NECAP1-204ENST00000540083 PPIAL4EA0A075B759 164 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 PPIAL4CA0A0B4J2A2 164 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 LOC107986453A0A1B0GWG9 222 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 FOXI3A8MTJ6 420 aaPredicted RBP6.24□□□□□ -1.41
NECAP1-204ENST00000540083 PPIAL4DF5H284 164 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 F5H5K5 113 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 DEGS1O15121 323 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 RER1O15258 196 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 HMGB3O15347 200 aaKnown RBP6.24□□□□□ -1.41
NECAP1-204ENST00000540083 PDE6DO43924 150 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 SERF1AO75920 110 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 MPZL1O95297 269 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 SCGB1D2O95969 90 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 GYPAP02724 150 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 WNT2P09544 360 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 PATE4P0C8F1 98 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 PPIAL4FP0DN26 164 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 S100GP29377 79 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 NKX2-1P43699 371 aaPredicted RBP6.24□□□□□ -1.41
NECAP1-204ENST00000540083 GPM6AP51674 278 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 SSBP2P81877 361 aaPredicted RBP6.24□□□□□ -1.41
NECAP1-204ENST00000540083 OR8B8Q15620 311 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 CST9LP1Q5W188 147 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 MRPL21Q7Z2W9 205 aaKnown RBP6.24□□□□□ -1.41
NECAP1-204ENST00000540083 RNF133Q8WVZ7 376 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 C10orf35Q96D05 121 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 NEIL1Q96FI4 390 aaPredicted RBP6.24□□□□□ -1.41
NECAP1-204ENST00000540083 MRAP2Q96G30 205 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 POM121L2Q96KW2 1035 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 JMJD8Q96S16 334 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 SIGMAR1Q99720 223 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 TM2D1Q9BX74 207 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 TMEM59Q9BXS4 323 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 GNB1LQ9BYB4 327 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 MS4A5Q9H3V2 200 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 KCNK15Q9H427 330 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 UBTD1Q9HAC8 227 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 PATZ1Q9HBE1 687 aaKnown RBP6.24□□□□□ -1.41
NECAP1-204ENST00000540083 GCM1Q9NP62 436 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 MRPL22Q9NWU5 206 aaKnown RBP6.24□□□□□ -1.41
NECAP1-204ENST00000540083 FBXL7Q9UJT9 491 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 SPTAN1Q13813 2472 aaKnown RBP6.24□□□□□ -1.41
NECAP1-204ENST00000540083 COL12A1Q99715 3063 aa6.24□□□□□ -1.41
NECAP1-204ENST00000540083 GCN1Q92616 2671 aaKnown RBP6.23□□□□□ -1.41
NECAP1-204ENST00000540083 HEATR1Q9H583 2144 aaKnown RBP6.23□□□□□ -1.41
NECAP1-204ENST00000540083 PKDREJQ9NTG1 2253 aa6.23□□□□□ -1.41
NECAP1-204ENST00000540083 A0A0U1RQK1 487 aa6.23□□□□□ -1.41
NECAP1-204ENST00000540083 IGSF23A1L1A6 192 aa6.23□□□□□ -1.41
NECAP1-204ENST00000540083 CEBPZOSA8MTT3 80 aa6.23□□□□□ -1.41
NECAP1-204ENST00000540083 SHISA9B4DS77 424 aa6.23□□□□□ -1.41
NECAP1-204ENST00000540083 H0YJW9 148 aa6.23□□□□□ -1.41
NECAP1-204ENST00000540083 M0R135 149 aa6.23□□□□□ -1.41
NECAP1-204ENST00000540083 XRCC2O43543 280 aa6.23□□□□□ -1.41
NECAP1-204ENST00000540083 SLC25A17O43808 307 aa6.23□□□□□ -1.41
NECAP1-204ENST00000540083 TSPAN13O95857 204 aa6.23□□□□□ -1.41
NECAP1-204ENST00000540083 ZNF728P0DKX0 622 aa6.23□□□□□ -1.41
NECAP1-204ENST00000540083 CDKN1AP38936 164 aa6.23□□□□□ -1.41
NECAP1-204ENST00000540083 HINT1P49773 126 aaPredicted RBP6.23□□□□□ -1.41
NECAP1-204ENST00000540083 SNU13P55769 128 aaKnown RBP6.23□□□□□ -1.41
NECAP1-204ENST00000540083 LINC00310P59036 64 aa6.23□□□□□ -1.41
NECAP1-204ENST00000540083 HIST1H1AQ02539 215 aaPredicted RBP6.23□□□□□ -1.41
NECAP1-204ENST00000540083 MZT1Q08AG7 82 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms