RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 SMCO3A2RU48 225 aa13.83□□□□□ -0.2
LTBR-207ENST00000539925 IFNA1P01562 189 aa13.83□□□□□ -0.2
LTBR-207ENST00000539925 GPX4P36969 197 aaPredicted RBP13.83□□□□□ -0.2
LTBR-207ENST00000539925 COMPP49747 757 aaPredicted RBP13.83□□□□□ -0.2
LTBR-207ENST00000539925 DSCR9P59020 149 aa13.83□□□□□ -0.2
LTBR-207ENST00000539925 PAX2Q02962 417 aa13.83□□□□□ -0.2
LTBR-207ENST00000539925 PSG5Q15238 335 aa13.83□□□□□ -0.2
LTBR-207ENST00000539925 PRSS8Q16651 343 aa13.83□□□□□ -0.2
LTBR-207ENST00000539925 FFAR4Q5NUL3 377 aa13.83□□□□□ -0.2
LTBR-207ENST00000539925 TEPPQ6URK8 271 aa13.83□□□□□ -0.2
LTBR-207ENST00000539925 CLEC2AQ6UVW9 174 aa13.83□□□□□ -0.2
LTBR-207ENST00000539925 TMEM170AQ8WVE7 144 aa13.83□□□□□ -0.2
LTBR-207ENST00000539925 FAM168AQ92567 244 aa13.83□□□□□ -0.2
LTBR-207ENST00000539925 RCC1LQ96I51 464 aaKnown RBP13.83□□□□□ -0.2
LTBR-207ENST00000539925 SLC39A9Q9NUM3 307 aa13.83□□□□□ -0.2
LTBR-207ENST00000539925 CTXND1A0A1B0GTU2 59 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 RBFOX3A6NFN3 312 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 PRB1P04280 392 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 CRYGBP07316 175 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 SFTA3P0C7M3 94 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 COX6B1P14854 86 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 LGALS4P56470 323 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 DEFA5Q01523 94 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 AKR1C1Q04828 323 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 TREML4Q6UXN2 200 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 VMO1Q7Z5L0 202 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 SIRPDQ9H106 197 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 SIGLEC9Q9Y336 463 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 FAM96BQ9Y3D0 163 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 RFNGQ9Y644 331 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 KALRNO60229 2985 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 NDUFS6O75380 124 aaKnown RBP13.82□□□□□ -0.2
LTBR-207ENST00000539925 SNAPINO95295 136 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 RNASE2P10153 161 aaKnown RBP13.82□□□□□ -0.2
LTBR-207ENST00000539925 ZFP36P26651 326 aaKnown RBP13.82□□□□□ -0.2
LTBR-207ENST00000539925 ELLP55199 621 aaPredicted RBP13.82□□□□□ -0.2
LTBR-207ENST00000539925 SRSF3P84103 164 aaKnown RBP13.82□□□□□ -0.2
LTBR-207ENST00000539925 KHDC3LQ587J8 217 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 ZNF787Q6DD87 383 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 HCP5Q6MZN7 132 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 OR10G4Q8NGN3 311 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 OR10G9Q8NGN4 311 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 OR10G7Q8NGN6 311 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 SCRT1Q9BWW7 348 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 SLC35B3Q9H1N7 401 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 LPAR2Q9HBW0 351 aa13.82□□□□□ -0.2
LTBR-207ENST00000539925 LSM4Q9Y4Z0 139 aaKnown RBP13.82□□□□□ -0.2
LTBR-207ENST00000539925 IGHV3-72A0A0B4J1Y9 119 aa13.81□□□□□ -0.2
LTBR-207ENST00000539925 HSPB1P04792 205 aaKnown RBP13.81□□□□□ -0.2
LTBR-207ENST00000539925 PAX1P15863 534 aa13.81□□□□□ -0.2
LTBR-207ENST00000539925 RPL27AP46776 148 aaKnown RBP13.81□□□□□ -0.2
LTBR-207ENST00000539925 TMEM249Q2WGJ8 235 aa13.81□□□□□ -0.2
LTBR-207ENST00000539925 ZNF506Q5JVG8 444 aa13.81□□□□□ -0.2
LTBR-207ENST00000539925 RBMS3Q6XE24 437 aaKnown RBP13.81□□□□□ -0.2
LTBR-207ENST00000539925 TMEM144Q7Z5S9 345 aa13.81□□□□□ -0.2
LTBR-207ENST00000539925 PPP1R27Q86WC6 154 aa13.81□□□□□ -0.2
LTBR-207ENST00000539925 TMEM231Q9H6L2 316 aa13.81□□□□□ -0.2
LTBR-207ENST00000539925 MAP1LC3B2A6NCE7 125 aa13.8□□□□□ -0.2
LTBR-207ENST00000539925 FAM157AC9JC47 383 aa13.8□□□□□ -0.2
LTBR-207ENST00000539925 TIMM23O14925 209 aa13.8□□□□□ -0.2
LTBR-207ENST00000539925 TOX4O94842 621 aa13.8□□□□□ -0.2
LTBR-207ENST00000539925 VENTXO95231 258 aa13.8□□□□□ -0.2
LTBR-207ENST00000539925 MOSP00540 346 aa13.8□□□□□ -0.2
LTBR-207ENST00000539925 PPT1P50897 306 aa13.8□□□□□ -0.2
LTBR-207ENST00000539925 UBE2E1P51965 193 aa13.8□□□□□ -0.2
LTBR-207ENST00000539925 LCN2P80188 198 aa13.8□□□□□ -0.2
LTBR-207ENST00000539925 ZNF114Q8NC26 417 aa13.8□□□□□ -0.2
LTBR-207ENST00000539925 C10orf105Q8TEF2 133 aa13.8□□□□□ -0.2
LTBR-207ENST00000539925 MAP1LC3BQ9GZQ8 125 aa13.8□□□□□ -0.2
LTBR-207ENST00000539925 METTL1Q9UBP6 276 aaKnown RBP13.8□□□□□ -0.2
LTBR-207ENST00000539925 NBEAQ8NFP9 2946 aa13.8□□□□□ -0.2
LTBR-207ENST00000539925 TET2Q6N021 2002 aaPredicted RBP13.79□□□□□ -0.2
LTBR-207ENST00000539925 SEC14L6B5MCN3 397 aa13.79□□□□□ -0.2
LTBR-207ENST00000539925 CORTO00230 105 aa13.79□□□□□ -0.2
LTBR-207ENST00000539925 SNRNP70P08621 437 aaKnown RBP13.79□□□□□ -0.2
LTBR-207ENST00000539925 HOXB4P17483 251 aaPredicted RBP13.79□□□□□ -0.2
LTBR-207ENST00000539925 RPL29P47914 159 aaKnown RBP13.79□□□□□ -0.2
LTBR-207ENST00000539925 ATP5J2P56134 94 aa13.79□□□□□ -0.2
LTBR-207ENST00000539925 CD69Q07108 199 aa13.79□□□□□ -0.2
LTBR-207ENST00000539925 ARSJQ5FYB0 599 aaPredicted RBP13.79□□□□□ -0.2
LTBR-207ENST00000539925 ETFRF1Q6IPR1 90 aa13.79□□□□□ -0.2
LTBR-207ENST00000539925 ACSM6Q6P461 480 aa13.79□□□□□ -0.2
LTBR-207ENST00000539925 OR2T10Q8NGZ9 312 aa13.79□□□□□ -0.2
LTBR-207ENST00000539925 OPN1MWP04001 364 aa13.79□□□□□ -0.2
LTBR-207ENST00000539925 OPN1MW2P0DN77 364 aa13.79□□□□□ -0.2
LTBR-207ENST00000539925 OPN1MW3P0DN78 364 aa13.79□□□□□ -0.2
LTBR-207ENST00000539925 MYOD1P15172 320 aa13.79□□□□□ -0.2
LTBR-207ENST00000539925 ADCYAP1P18509 176 aa13.79□□□□□ -0.2
LTBR-207ENST00000539925 RPP25LQ8N5L8 163 aaKnown RBP13.79□□□□□ -0.2
LTBR-207ENST00000539925 NPBQ8NG41 125 aa13.79□□□□□ -0.2
LTBR-207ENST00000539925 CFHR4Q92496 578 aa13.79□□□□□ -0.2
LTBR-207ENST00000539925 MALSU1Q96EH3 234 aa13.79□□□□□ -0.2
LTBR-207ENST00000539925 SLC35E1Q96K37 410 aa13.79□□□□□ -0.2
LTBR-207ENST00000539925 GGTLC1Q9BX51 225 aa13.79□□□□□ -0.2
LTBR-207ENST00000539925 NKX6-2Q9C056 277 aaPredicted RBP13.79□□□□□ -0.2
LTBR-207ENST00000539925 VSIRQ9H7M9 311 aa13.79□□□□□ -0.2
LTBR-207ENST00000539925 TNCP24821 2201 aa13.78□□□□□ -0.2
LTBR-207ENST00000539925 DLX1P56177 255 aa13.78□□□□□ -0.2
LTBR-207ENST00000539925 ZNF726P1Q15940 193 aa13.78□□□□□ -0.2
LTBR-207ENST00000539925 LCN15Q6UWW0 184 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms