RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 OR5B3Q8NH48 314 aa8.79□□□□□ -1
RTN3-209ENST00000538995 OR52I2Q8NH67 350 aa8.79□□□□□ -1
RTN3-209ENST00000538995 LSM10Q969L4 123 aaKnown RBP8.79□□□□□ -1
RTN3-209ENST00000538995 FKBP11Q9NYL4 201 aa8.79□□□□□ -1
RTN3-209ENST00000538995 PRNDQ9UKY0 176 aa8.79□□□□□ -1
RTN3-209ENST00000538995 TEX50A0A1B0GTY4 177 aa8.78□□□□□ -1
RTN3-209ENST00000538995 A8MWP6 167 aa8.78□□□□□ -1
RTN3-209ENST00000538995 PPP5D1E7EU14 171 aa8.78□□□□□ -1
RTN3-209ENST00000538995 M0QYG6 137 aa8.78□□□□□ -1
RTN3-209ENST00000538995 FRMD6-AS1P0C7T7 363 aa8.78□□□□□ -1
RTN3-209ENST00000538995 RPA2P15927 270 aa8.78□□□□□ -1
RTN3-209ENST00000538995 G6PCP35575 357 aa8.78□□□□□ -1
RTN3-209ENST00000538995 TMBIM6P55061 237 aa8.78□□□□□ -1
RTN3-209ENST00000538995 SPCS2Q15005 226 aa8.78□□□□□ -1
RTN3-209ENST00000538995 CLEC19AQ6UXS0 136 aa8.78□□□□□ -1
RTN3-209ENST00000538995 GTSCR1Q86UQ5 136 aa8.78□□□□□ -1
RTN3-209ENST00000538995 LHFPL1Q86WI0 220 aa8.78□□□□□ -1
RTN3-209ENST00000538995 LAX1Q8IWV1 398 aa8.78□□□□□ -1
RTN3-209ENST00000538995 Q8N1Y9 231 aa8.78□□□□□ -1
RTN3-209ENST00000538995 VN1R17PQ8TDU5 208 aa8.78□□□□□ -1
RTN3-209ENST00000538995 ABHD1Q96SE0 405 aa8.78□□□□□ -1
RTN3-209ENST00000538995 ATP6V0BQ99437 205 aa8.78□□□□□ -1
RTN3-209ENST00000538995 THAP7Q9BT49 309 aaPredicted RBP8.78□□□□□ -1
RTN3-209ENST00000538995 NDUFA4L2Q9NRX3 87 aa8.78□□□□□ -1
RTN3-209ENST00000538995 TMEM14BQ9NUH8 114 aa8.78□□□□□ -1
RTN3-209ENST00000538995 CCDC59Q9P031 241 aaKnown RBP8.78□□□□□ -1
RTN3-209ENST00000538995 RABL2AQ9UBK7 228 aaPredicted RBP8.78□□□□□ -1
RTN3-209ENST00000538995 KLK11Q9UBX7 282 aa8.78□□□□□ -1
RTN3-209ENST00000538995 RABL2BQ9UNT1 228 aa8.78□□□□□ -1
RTN3-209ENST00000538995 HUWE1Q7Z6Z7 4374 aaKnown RBP8.77□□□□□ -1
RTN3-209ENST00000538995 MFSD2BA6NFX1 497 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 C2orf70A6NJV1 201 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 C15orf61A6NNL5 157 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 GABARAPH6UMI1 98 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 RGS5O15539 181 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 OR2C1O95371 312 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 CD74P04233 296 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 CD3DP04234 171 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 SERPINE2P07093 398 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 OR13C7P0DN81 318 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 IGHV4-30-4P0DP06 118 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 TAS2R19P59542 299 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 WT1-ASQ06250 92 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 FAM106AQ4KMX7 169 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 CLVS1Q8IUQ0 354 aaPredicted RBP8.77□□□□□ -1.01
RTN3-209ENST00000538995 SBSPONQ8IVN8 264 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 TMEM229BQ8NBD8 167 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 OR10W1Q8NGF6 305 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 OR1L6Q8NGR2 347 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 ZNF502Q8TBZ5 544 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 DYNLRB2Q8TF09 96 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 SEC22AQ96IW7 307 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 TMEM56Q96MV1 263 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 ASCL2Q99929 193 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 MIXL1Q9H2W2 232 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 TECRQ9NZ01 308 aaKnown RBP8.77□□□□□ -1.01
RTN3-209ENST00000538995 OR51B2Q9Y5P1 312 aa8.77□□□□□ -1.01
RTN3-209ENST00000538995 F11RQ9Y624 299 aaKnown RBP8.77□□□□□ -1.01
RTN3-209ENST00000538995 NOL3O60936 208 aaKnown RBP8.76□□□□□ -1.01
RTN3-209ENST00000538995 IGHV3-23P01764 117 aa8.76□□□□□ -1.01
RTN3-209ENST00000538995 HLA-AP01891 365 aaKnown RBP8.76□□□□□ -1.01
RTN3-209ENST00000538995 PGAM2P15259 253 aa8.76□□□□□ -1.01
RTN3-209ENST00000538995 RPL5P46777 297 aaKnown RBP8.76□□□□□ -1.01
RTN3-209ENST00000538995 RNASE12Q5GAN4 147 aaKnown RBP8.76□□□□□ -1.01
RTN3-209ENST00000538995 ADAMTSL5Q6ZMM2 481 aa8.76□□□□□ -1.01
RTN3-209ENST00000538995 DYNC2LI1Q8TCX1 351 aa8.76□□□□□ -1.01
RTN3-209ENST00000538995 SMIM4Q8WVI0 70 aa8.76□□□□□ -1.01
RTN3-209ENST00000538995 ZC4H2Q9NQZ6 224 aa8.76□□□□□ -1.01
RTN3-209ENST00000538995 C19orf73Q9NVV2 129 aa8.76□□□□□ -1.01
RTN3-209ENST00000538995 NBEAL2Q6ZNJ1 2754 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 TMEM213A2RRL7 107 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 CTDSP2O14595 271 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 CTDSPLO15194 276 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 B3GALNT1O75752 331 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 ATG12O94817 140 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 RAB3DO95716 219 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 IGKV1-39P01597 117 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 IGKV1D-39P04432 117 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 CLEC3BP05452 202 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 FOLR2P14207 255 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 GPR183P32249 361 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 PIGPP57054 158 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 MEF2DQ14814 521 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 DEFB114Q30KQ6 69 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 CD300EQ496F6 205 aaPredicted RBP8.75□□□□□ -1.01
RTN3-209ENST00000538995 STEAP1BQ6NZ63 245 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 H2BFWTQ7Z2G1 175 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 CCDC71LQ8N9Z2 235 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 OR1P1Q8NH06 330 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 OR4A16Q8NH70 328 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 TERB2Q8NHR7 220 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 ZFAND1Q8TCF1 268 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 MARC2Q969Z3 335 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 MRGPRFQ96AM1 343 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 HINT2Q9BX68 163 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 ZMAT4Q9H898 229 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 PALMDQ9NP74 551 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 NSG2Q9Y328 171 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 S4R3C0 116 aa8.75□□□□□ -1.01
RTN3-209ENST00000538995 IZUMO1RA6ND01 250 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms