RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 PITX2Q99697 317 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 MCHR1Q99705 422 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 GINS4Q9BRT9 223 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 MARVELD1Q9BSK0 173 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 SFXN3Q9BWM7 321 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 TAPBPLQ9BX59 468 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 HCAR1Q9BXC0 346 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 GABARAPL3Q9BY60 117 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 MROQ9BYG7 248 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 PLA2G12AQ9BZM1 189 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 LINC00470Q9BZP3 86 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 CHIAQ9BZP6 476 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 LPAR5Q9H1C0 372 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 MS4A6AQ9H2W1 248 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 PRO1933Q9H354 126 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 PPDPFQ9H3Y8 114 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 CST9LQ9H4G1 147 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 RNF167Q9H6Y7 350 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 METTL17Q9H7H0 456 aaPredicted RBP1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF442Q9H7R0 627 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF665Q9H7R5 613 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 ADGRL4Q9HBW9 690 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 ACOT13Q9NPJ3 140 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 HINT3Q9NQE9 182 aaKnown RBP1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 SCN3BQ9NY72 215 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 NPAP1Q9NZP6 1156 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 METTL1Q9UBP6 276 aaKnown RBP1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF629Q9UEG4 869 aaPredicted RBP1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 PURGQ9UJV8 347 aaKnown RBP1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 TRAPPC2LQ9UL33 140 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 TNFSF18Q9UNG2 199 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 WDR83OSQ9Y284 106 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 ZFP30Q9Y2G7 519 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 KLHDC2Q9Y2U9 406 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 MOB4Q9Y3A3 225 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 WSB1Q9Y6I7 421 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 HSPE1-MOB4S4R3N1 261 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 U3KQ87 197 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 MALRD1Q5VYJ5 2156 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 WNK2Q9Y3S1 2297 aa1.46□□□□□ -2.18
CBX3P4-201ENST00000538909 TRAV27A0A087WT01 109 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 A0A096LNT2 108 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 IGLV1-36A0A0B4J1U3 117 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 IQCMA0A1B0GVH7 501 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 ANKRD20A5PA0PJZ0 165 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 TMEM189A5PLL7 270 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 NKX2-6A6NCS4 301 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 OR4C46A6NHA9 309 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 CPSF4LA6NMK7 179 aaKnown RBP1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 DEFB108AA8MXU0 73 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 PRR32B1ATL7 298 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF732B4DXR9 585 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 J3QRE1 110 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 M0R2Z0 102 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 FABP7O15540 132 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 OR2T1O43869 369 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 ORC5O43913 435 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 CXCL13O43927 109 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 NDUFB4O95168 129 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 IFNA7P01567 189 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 IGLV3-1P01715 115 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 HBE1P02100 147 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 APOA2P02652 100 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 FABP3P05413 133 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 H1F0P07305 194 aaKnown RBP1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 ADRA2AP08913 450 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 SNRPCP09234 159 aaKnown RBP1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 UCHL1P09936 223 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 CT45A6P0DMU7 189 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 CT45A5P0DMU8 189 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 CT45A7P0DMV0 189 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 ESDP10768 282 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF250P15622 560 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 HIST1H1BP16401 226 aaKnown RBP1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF14P17017 642 aaPredicted RBP1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 RPL35AP18077 110 aaKnown RBP1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 MYL12AP19105 171 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 NTF3P20783 257 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 CRYGSP22914 178 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 IGHV1-2P23083 117 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 HRH1P35367 487 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 RPL4P36578 427 aaKnown RBP1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 GABRA2P47869 451 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 DAPP51397 102 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 XGP55808 180 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 ZNF121P58317 390 aaPredicted RBP1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 DEFA1P59665 94 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 GNG5P63218 68 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 HIST1H3AP68431 136 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 SLC35A1P78382 337 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 PSG4Q00888 419 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 DEFA5Q01523 94 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 RPL18Q07020 188 aaKnown RBP1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 FABP9Q0Z7S8 132 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 OR2F1Q13607 317 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 KLF5Q13887 457 aaPredicted RBP1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 GGTLC2Q14390 218 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 OXA1LQ15070 435 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 PMVKQ15126 192 aa1.45□□□□□ -2.18
CBX3P4-201ENST00000538909 OR8B8Q15620 311 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms