RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 LINC00311Q8N616 119 aa11.39□□□□□ -0.59
ACTN1-205ENST00000538545 GATAD1Q8WUU5 269 aa11.39□□□□□ -0.59
ACTN1-205ENST00000538545 NKX6-2Q9C056 277 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-205ENST00000538545 INSIG2Q9Y5U4 225 aa11.39□□□□□ -0.59
ACTN1-205ENST00000538545 IGHV1-3A0A0C4DH29 117 aa11.39□□□□□ -0.59
ACTN1-205ENST00000538545 POU2AF1Q16633 256 aa11.39□□□□□ -0.59
ACTN1-205ENST00000538545 IQCF2Q8IXL9 164 aa11.39□□□□□ -0.59
ACTN1-205ENST00000538545 OR52E5Q8NH55 327 aa11.39□□□□□ -0.59
ACTN1-205ENST00000538545 ZNF596Q8TC21 504 aa11.39□□□□□ -0.59
ACTN1-205ENST00000538545 PLEKHA3Q9HB20 300 aa11.39□□□□□ -0.59
ACTN1-205ENST00000538545 WASHC3Q9Y3C0 194 aa11.39□□□□□ -0.59
ACTN1-205ENST00000538545 FAM90A9PA6NNJ1 464 aa11.38□□□□□ -0.59
ACTN1-205ENST00000538545 MIC13Q5XKP0 118 aa11.38□□□□□ -0.59
ACTN1-205ENST00000538545 FAM122CQ6P4D5 195 aa11.38□□□□□ -0.59
ACTN1-205ENST00000538545 OSR1Q8TAX0 266 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-205ENST00000538545 SUN5Q8TC36 379 aa11.38□□□□□ -0.59
ACTN1-205ENST00000538545 ENY2Q9NPA8 101 aa11.38□□□□□ -0.59
ACTN1-205ENST00000538545 GATA2P23769 480 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-205ENST00000538545 RPL8P62917 257 aaKnown RBP11.38□□□□□ -0.59
ACTN1-205ENST00000538545 MRGPRG-AS1Q2M3A8 158 aa11.38□□□□□ -0.59
ACTN1-205ENST00000538545 TMEM177Q53S58 311 aa11.38□□□□□ -0.59
ACTN1-205ENST00000538545 RPEQ96AT9 228 aa11.38□□□□□ -0.59
ACTN1-205ENST00000538545 PCGF1Q9BSM1 259 aa11.38□□□□□ -0.59
ACTN1-205ENST00000538545 COMMD5Q9GZQ3 224 aa11.38□□□□□ -0.59
ACTN1-205ENST00000538545 GNB1P62873 340 aa11.37□□□□□ -0.59
ACTN1-205ENST00000538545 PRCDQ00LT1 54 aa11.37□□□□□ -0.59
ACTN1-205ENST00000538545 ZNF787Q6DD87 383 aa11.37□□□□□ -0.59
ACTN1-205ENST00000538545 LY6G5BQ8NDX9 201 aa11.37□□□□□ -0.59
ACTN1-205ENST00000538545 BET1LQ9NYM9 111 aa11.37□□□□□ -0.59
ACTN1-205ENST00000538545 PRNDQ9UKY0 176 aa11.37□□□□□ -0.59
ACTN1-205ENST00000538545 DOPEY2Q9Y3R5 2298 aa11.37□□□□□ -0.59
ACTN1-205ENST00000538545 RBFOX3A6NFN3 312 aa11.37□□□□□ -0.59
ACTN1-205ENST00000538545 IGHV4-39P01824 125 aa11.37□□□□□ -0.59
ACTN1-205ENST00000538545 WT1-ASQ06250 92 aa11.37□□□□□ -0.59
ACTN1-205ENST00000538545 RUSC1-AS1Q66K80 236 aa11.37□□□□□ -0.59
ACTN1-205ENST00000538545 SP5Q6BEB4 398 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-205ENST00000538545 DHRS7BQ6IAN0 325 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-205ENST00000538545 MGST2Q99735 147 aa11.37□□□□□ -0.59
ACTN1-205ENST00000538545 IGHV3-21A0A0B4J1V1 117 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 DNASE2O00115 360 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-205ENST00000538545 FCN1O00602 326 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 RAB13P51153 203 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 ZNF137PP52743 207 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 PRRX1P54821 245 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 TLE4Q04727 773 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 HCP5Q6MZN7 132 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 PDPNQ86YL7 162 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 DYNAPQ8N1N2 210 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 OR10G4Q8NGN3 311 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 OR10G9Q8NGN4 311 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 OR10G7Q8NGN6 311 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 PSMG3Q9BT73 122 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-205ENST00000538545 SEC11CQ9BY50 192 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 FBXL15Q9H469 300 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 MAP1LC3B2A6NCE7 125 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 TIMM23O14925 209 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 EFNA4P52798 201 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 SSX2Q16385 188 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 PDLIM3Q53GG5 364 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-205ENST00000538545 TMEM41BQ5BJD5 291 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 C8orf46Q8TAG6 207 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 MAP1LC3BQ9GZQ8 125 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 WDR83OSQ9Y284 106 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 IGKV1OR2-108A0A075B7D4 117 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 NUDT19A8MXV4 375 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 ICAM4Q14773 271 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 VWC2Q2TAL6 325 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 C10orf91Q5T1B1 145 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 CLDND2Q8NHS1 167 aa11.36□□□□□ -0.59
ACTN1-205ENST00000538545 MDKP21741 143 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-205ENST00000538545 SSBP2P81877 361 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-205ENST00000538545 SRSF1Q07955 248 aaKnown RBP eCLIP11.35□□□□□ -0.59
ACTN1-205ENST00000538545 ATP6V1FQ16864 119 aa11.35□□□□□ -0.59
ACTN1-205ENST00000538545 VMO1Q7Z5L0 202 aa11.35□□□□□ -0.59
ACTN1-205ENST00000538545 SVBPQ8N300 66 aa11.35□□□□□ -0.59
ACTN1-205ENST00000538545 ZNF843Q8N446 348 aa11.35□□□□□ -0.59
ACTN1-205ENST00000538545 CYB561D1Q8N8Q1 229 aa11.35□□□□□ -0.59
ACTN1-205ENST00000538545 ZNF709Q8N972 641 aa11.35□□□□□ -0.59
ACTN1-205ENST00000538545 NDUFA4L2Q9NRX3 87 aa11.35□□□□□ -0.59
ACTN1-205ENST00000538545 SLC39A9Q9NUM3 307 aa11.35□□□□□ -0.59
ACTN1-205ENST00000538545 CARHSP1Q9Y2V2 147 aaKnown RBP11.35□□□□□ -0.59
ACTN1-205ENST00000538545 A0A1W2PPI3 338 aa11.35□□□□□ -0.59
ACTN1-205ENST00000538545 COL8A1P27658 744 aa11.35□□□□□ -0.59
ACTN1-205ENST00000538545 RAB11AP62491 216 aa11.35□□□□□ -0.59
ACTN1-205ENST00000538545 SERF2P84101 59 aa11.35□□□□□ -0.59
ACTN1-205ENST00000538545 PEA15Q15121 130 aa11.35□□□□□ -0.59
ACTN1-205ENST00000538545 TNXAQ16473 311 aa11.35□□□□□ -0.59
ACTN1-205ENST00000538545 OR2T6Q8NHC8 308 aa11.35□□□□□ -0.59
ACTN1-205ENST00000538545 YIF1AO95070 293 aa11.34□□□□□ -0.59
ACTN1-205ENST00000538545 RNASE2P10153 161 aaKnown RBP11.34□□□□□ -0.59
ACTN1-205ENST00000538545 AREGP15514 252 aa11.34□□□□□ -0.59
ACTN1-205ENST00000538545 C8orf31Q8N9H6 132 aa11.34□□□□□ -0.59
ACTN1-205ENST00000538545 RAB24Q969Q5 203 aa11.34□□□□□ -0.59
ACTN1-205ENST00000538545 GGTLC1Q9BX51 225 aa11.34□□□□□ -0.59
ACTN1-205ENST00000538545 KIAA1456Q9P272 454 aa11.34□□□□□ -0.59
ACTN1-205ENST00000538545 PUS1Q9Y606 427 aaKnown RBP eCLIP11.34□□□□□ -0.59
ACTN1-205ENST00000538545 TENM4Q6N022 2769 aa11.34□□□□□ -0.59
ACTN1-205ENST00000538545 SCAF4O95104 1147 aaKnown RBP11.34□□□□□ -0.59
ACTN1-205ENST00000538545 IGHV2-5P01817 119 aa11.34□□□□□ -0.59
ACTN1-205ENST00000538545 IL3RAP26951 378 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms