RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 ZFYVE26Q68DK2 2539 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 CENPEQ02224 2701 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 SCO2A0A1W2PP80 73 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 PPP5D1E7EU14 171 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 DVL1O14640 695 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 APOA2P02652 100 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 OR10J1P30954 320 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 SLC35B1P78383 322 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 EIF4EBP1Q13541 118 aaPredicted RBP7.14□□□□□ -1.27
UBE3B-208ENST00000538070 OR2T6Q8NHC8 308 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 SGK494Q96LW2 274 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 ZNF714Q96N38 554 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 TOLLIPQ9H0E2 274 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 DCHS2Q6V1P9 2916 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 A0A1B0GW64 132 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 ZNF320A2RRD8 509 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 SLC25A17O43808 307 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 TOX4O94842 621 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 IL6RP08887 468 aaPredicted RBP7.13□□□□□ -1.27
UBE3B-208ENST00000538070 P0C879 139 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 SAA1P0DJI8 122 aaPredicted RBP7.13□□□□□ -1.27
UBE3B-208ENST00000538070 CT45A6P0DMU7 189 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 CT45A5P0DMU8 189 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 CT45A7P0DMV0 189 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 CEACAM8P31997 349 aaPredicted RBP7.13□□□□□ -1.27
UBE3B-208ENST00000538070 LGALS4P56470 323 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 PSG5Q15238 335 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 ARSJQ5FYB0 599 aaPredicted RBP7.13□□□□□ -1.27
UBE3B-208ENST00000538070 PRR31Q5SQ13 230 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 CDPF1Q6NVV7 123 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 TEPPQ6URK8 271 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 TCF23Q7RTU1 214 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 TUBA4BQ9H853 241 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 TUBG2Q9NRH3 451 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 FUT9Q9Y231 359 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 WDR83OSQ9Y284 106 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 IGLV3-9A0A075B6K5 115 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 H3BTX0 84 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 KBTBD11O94819 623 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 LHBP01229 141 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 THBDP07204 575 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 TBR1Q16650 682 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 MAJINQ3KP22 176 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 LRRC10Q5BKY1 277 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 TMEM200BQ69YZ2 307 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 ZNF788Q6ZQV5 615 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 MIR17HGQ75NE6 70 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 Q8NA96 180 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 NHLRC2Q8NBF2 726 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 OR9G1Q8NH87 305 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 GGTLC1Q9BX51 225 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 NPVFQ9HCQ7 196 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 PTPRBP23467 1997 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 TRAV1-1A0A0B4J248 108 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 F2RL2O00254 374 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 CD24P25063 80 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 PRSS8Q16651 343 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 C9orf152Q5JTZ5 239 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 ZNF114Q8NC26 417 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 TMEM170AQ8WVE7 144 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 SERTAD4Q9NUC0 356 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 TMEM106BQ9NUM4 274 aa7.13□□□□□ -1.27
UBE3B-208ENST00000538070 HIVEP3Q5T1R4 2406 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 CREBBPQ92793 2442 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 TRAV20A0A0B4J274 112 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 C15orf61A6NNL5 157 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 FABP1P07148 127 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 OR5G3P0C626 314 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 MGST1P10620 155 aaKnown RBP7.12□□□□□ -1.27
UBE3B-208ENST00000538070 NPPCP23582 126 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 OPRK1P41145 380 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 GNB2P62879 340 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 PLGLAQ15195 96 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 PRO1933Q9H354 126 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 GAR1Q9NY12 217 aaKnown RBP7.12□□□□□ -1.27
UBE3B-208ENST00000538070 RAXQ9Y2V3 346 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 FAM208BQ5VWN6 2430 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 ZNF705GA8MUZ8 300 aaPredicted RBP7.12□□□□□ -1.27
UBE3B-208ENST00000538070 SLC17A3O00476 420 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 FOLR2P14207 255 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 TCL1AP56279 114 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 FLYWCH2Q96CP2 140 aaKnown RBP7.12□□□□□ -1.27
UBE3B-208ENST00000538070 MISP3Q96FF7 219 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 UHRF2Q96PU4 802 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 GAL3ST2Q9H3Q3 398 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 RPUSD1Q9UJJ7 312 aaKnown RBP7.12□□□□□ -1.27
UBE3B-208ENST00000538070 NOTCH3Q9UM47 2321 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.12□□□□□ -1.27
UBE3B-208ENST00000538070 LINC00587B1AMM8 73 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 F6UZH7 168 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 CCL21O00585 134 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 SOD3P08294 240 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 VDAC2P45880 294 aaPredicted RBP7.12□□□□□ -1.27
UBE3B-208ENST00000538070 RAB4BP61018 213 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 PNRC1Q12796 327 aaPredicted RBP7.12□□□□□ -1.27
UBE3B-208ENST00000538070 OR5I1Q13606 314 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 RAB9BQ9NP90 201 aa7.12□□□□□ -1.27
UBE3B-208ENST00000538070 TRAV5A0A0B4J249 113 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 MDFIC2A0A1B0GVS7 189 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 ZNF729A6NN14 1252 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms