RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 FAM90A14PP0C7W9 464 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 FAM90A24PP0C7X0 464 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 GCHFRP30047 84 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 FCGR2BP31994 310 aaPredicted RBP7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 OPRK1P41145 380 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 GUSBP1Q15486 140 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 GCSAMLQ5JQS6 135 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 LHX8Q68G74 356 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 TEX45Q8NA69 505 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 ZNF502Q8TBZ5 544 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 GTSF1Q8WW33 167 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 B4GALT7Q9UBV7 327 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 KIAA1549Q9HCM3 1950 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 C21orf140B9A014 251 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 FGF6P10767 208 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 ZNF157P51786 506 aaPredicted RBP7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 WIPI1Q5MNZ9 446 aaPredicted RBP7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 LINC00173Q6ZV60 143 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 ATP5L2Q7Z4Y8 100 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 ANKRD37Q7Z713 158 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 GJC3Q8NFK1 279 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 FLVCR1-AS1Q8TAF5 88 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 TMEM54Q969K7 222 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 URB1-AS1Q96HZ7 61 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 MTCH1Q9NZJ7 389 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 WNT6Q9Y6F9 365 aa7.09□□□□□ -1.27
SRGAP1-202ENST00000537556 A0A1W2PRU2 124 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 C5orf63A6NC05 138 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 FRG2CA6NGY1 282 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 PRR19A6NJB7 356 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 SH2D7A6NKC9 451 aaPredicted RBP7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 SMAD7O15105 426 aaKnown RBP7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 DHHO43323 396 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 RTL8BQ17RB0 113 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 BADQ92934 168 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 RAB1BQ9H0U4 201 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 KMT2EQ8IZD2 1858 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 IGKV1-27A0A075B6S5 117 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 IGKV1-12A0A0C4DH73 117 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 WISP1O95388 367 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 CLDN14O95500 239 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 IGKV1D-12P01611 117 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 P2RY2P41231 377 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 MFAP5Q13361 173 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 FAM110CQ1W6H9 321 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 SH2D6Q7Z4S9 175 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 FGFRL1Q8N441 504 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 NHLRC2Q8NBF2 726 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 CCL26Q9Y258 94 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 LOC102723996A0A087X1L8 192 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 hCG_38984A0A1B0GV85 526 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 MANSC4A6NHS7 340 aaPredicted RBP7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 C17orf51A8MQB3 221 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 H0YIG0 161 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 P04436 131 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 GAGE13Q4V321 117 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 IGF2-ASQ6U949 168 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 TEPPQ6URK8 271 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 SPTSSAQ969W0 71 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 C1QTNF4Q9BXJ3 329 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 VCX2Q9H322 139 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 LINC00312Q9Y6C7 94 aa7.08□□□□□ -1.28
SRGAP1-202ENST00000537556 RRHO14718 337 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 TNFSF11O14788 317 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 CEACAM5P06731 702 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 ARL4DP49703 201 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 FOXE3Q13461 319 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 ZFAND6Q6FIF0 208 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 Q8N7P7 452 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 SYT8Q8NBV8 401 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 OR1L3Q8NH93 324 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 ARPC1AQ92747 370 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 NUDT22Q9BRQ3 303 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 ALKBH4Q9NXW9 302 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 WNT16Q9UBV4 365 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 LOXL2Q9Y4K0 774 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 THADAQ6YHU6 1953 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 M0R135 149 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 PF4V1P10720 104 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 CCL14Q16627 93 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 ACP7Q6ZNF0 438 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 Q6ZUT4 128 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 VWCEQ96DN2 955 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 ZNF799Q96GE5 643 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 IL36RNQ9UBH0 155 aa7.07□□□□□ -1.28
SRGAP1-202ENST00000537556 TMEM131Q92545 1883 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 MED12LQ86YW9 2145 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 IGKV1-6A0A0C4DH72 117 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 GAGE12JA6NER3 117 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 NRG2O14511 850 aaPredicted RBP7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 GAGE7O76087 117 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 APOMO95445 188 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 CLPSP04118 112 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 GAGE12FP0CL80 117 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 GAGE12GP0CL81 117 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 GAGE12IP0CL82 117 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 VDAC2P45880 294 aaPredicted RBP7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 CAMPP49913 170 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 GAGE4Q13068 117 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 879.2 ms