RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 PRR20DP86480 221 aa11.73□□□□□ -0.53
USP44-203ENST00000537435 PRR20BP86481 221 aa11.73□□□□□ -0.53
USP44-203ENST00000537435 PRR20AP86496 221 aa11.73□□□□□ -0.53
USP44-203ENST00000537435 ZNF664Q8N3J9 261 aa11.73□□□□□ -0.53
USP44-203ENST00000537435 FAM122AQ96E09 287 aa11.73□□□□□ -0.53
USP44-203ENST00000537435 WFIKKN1Q96NZ8 548 aa11.73□□□□□ -0.53
USP44-203ENST00000537435 IL19Q9UHD0 177 aa11.73□□□□□ -0.53
USP44-203ENST00000537435 ZFHX4Q86UP3 3567 aa11.73□□□□□ -0.53
USP44-203ENST00000537435 CACNA1HO95180 2353 aa11.73□□□□□ -0.53
USP44-203ENST00000537435 ACTL6BO94805 426 aa11.72□□□□□ -0.53
USP44-203ENST00000537435 SELENOVP59797 346 aa11.72□□□□□ -0.53
USP44-203ENST00000537435 C1orf185Q5T7R7 199 aa11.72□□□□□ -0.53
USP44-203ENST00000537435 C22orf34Q6ZV56 151 aa11.72□□□□□ -0.53
USP44-203ENST00000537435 MRPL41Q8IXM3 137 aaKnown RBP11.72□□□□□ -0.53
USP44-203ENST00000537435 GBGT1Q8N5D6 347 aa11.72□□□□□ -0.53
USP44-203ENST00000537435 PLEKHA3Q9HB20 300 aa11.72□□□□□ -0.53
USP44-203ENST00000537435 ZNRD1Q9P1U0 126 aa11.72□□□□□ -0.53
USP44-203ENST00000537435 PRNDQ9UKY0 176 aa11.72□□□□□ -0.53
USP44-203ENST00000537435 TP53TG5Q9Y2B4 290 aa11.72□□□□□ -0.53
USP44-203ENST00000537435 K7EN84 100 aa11.72□□□□□ -0.53
USP44-203ENST00000537435 IGKV1-16P04430 117 aa11.72□□□□□ -0.53
USP44-203ENST00000537435 PAX1P15863 534 aa11.72□□□□□ -0.53
USP44-203ENST00000537435 ZNF788Q6ZQV5 615 aa11.72□□□□□ -0.53
USP44-203ENST00000537435 MIR17HGQ75NE6 70 aa11.72□□□□□ -0.53
USP44-203ENST00000537435 SNRNP40Q96DI7 357 aaKnown RBP11.72□□□□□ -0.53
USP44-203ENST00000537435 CHODLQ9H9P2 273 aa11.72□□□□□ -0.53
USP44-203ENST00000537435 SLC35D1Q9NTN3 355 aa11.72□□□□□ -0.53
USP44-203ENST00000537435 A0A1B0GUS0 222 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 MKRN2OSH3BPM6 223 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 UPK2O00526 184 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 LINC00869P0C866 280 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 CT45A6P0DMU7 189 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 CT45A5P0DMU8 189 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 CT45A7P0DMV0 189 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 PRCDQ00LT1 54 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 FAM27E3Q08E93 113 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 MOB3BQ86TA1 216 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 CORO2AQ92828 525 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 UHRF2Q96PU4 802 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 DCAF16Q9NXF7 216 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 SRRM4A7MD48 611 aaKnown RBP11.71□□□□□ -0.53
USP44-203ENST00000537435 FNDC10F2Z333 226 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 CCKARP32238 428 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 HLA-DRB5Q30154 266 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 C11orf52Q96A22 123 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 LRFN3Q9BTN0 628 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 SFXN3Q9BWM7 321 aa11.71□□□□□ -0.53
USP44-203ENST00000537435 ICE1Q9Y2F5 2266 aa11.71□□□□□ -0.54
USP44-203ENST00000537435 ADMP35318 185 aa11.7□□□□□ -0.54
USP44-203ENST00000537435 ZNF90Q03938 601 aa11.7□□□□□ -0.54
USP44-203ENST00000537435 SLC25A48Q6ZT89 311 aaKnown RBP11.7□□□□□ -0.54
USP44-203ENST00000537435 TMEM256Q8N2U0 113 aa11.7□□□□□ -0.54
USP44-203ENST00000537435 NABP2Q9BQ15 211 aa11.7□□□□□ -0.54
USP44-203ENST00000537435 RPUSD1Q9UJJ7 312 aaKnown RBP11.7□□□□□ -0.54
USP44-203ENST00000537435 SLC45A2Q9UMX9 530 aa11.7□□□□□ -0.54
USP44-203ENST00000537435 ZNF257Q9Y2Q1 563 aa11.7□□□□□ -0.54
USP44-203ENST00000537435 SLC17A3O00476 420 aa11.7□□□□□ -0.54
USP44-203ENST00000537435 TNFSF4P23510 183 aa11.7□□□□□ -0.54
USP44-203ENST00000537435 YPEL3P61236 119 aaPredicted RBP11.7□□□□□ -0.54
USP44-203ENST00000537435 PSG5Q15238 335 aa11.7□□□□□ -0.54
USP44-203ENST00000537435 RTL8BQ17RB0 113 aa11.7□□□□□ -0.54
USP44-203ENST00000537435 IGFL3Q6UXB1 125 aa11.7□□□□□ -0.54
USP44-203ENST00000537435 LINC00574Q9H8X3 128 aa11.7□□□□□ -0.54
USP44-203ENST00000537435 IL36BQ9NZH7 164 aa11.7□□□□□ -0.54
USP44-203ENST00000537435 EP300Q09472 2414 aaPredicted RBP11.7□□□□□ -0.54
USP44-203ENST00000537435 A8MWP6 167 aa11.69□□□□□ -0.54
USP44-203ENST00000537435 C9JCJ5 164 aa11.69□□□□□ -0.54
USP44-203ENST00000537435 TM4SF5O14894 197 aa11.69□□□□□ -0.54
USP44-203ENST00000537435 CD40P25942 277 aa11.69□□□□□ -0.54
USP44-203ENST00000537435 RND1Q92730 232 aa11.69□□□□□ -0.54
USP44-203ENST00000537435 EAF1Q96JC9 268 aaPredicted RBP11.69□□□□□ -0.54
USP44-203ENST00000537435 SLC25A10Q9UBX3 287 aaPredicted RBP11.69□□□□□ -0.54
USP44-203ENST00000537435 DSCAML1Q8TD84 2053 aa11.69□□□□□ -0.54
USP44-203ENST00000537435 IGKV1OR2-108A0A075B7D4 117 aa11.69□□□□□ -0.54
USP44-203ENST00000537435 TEX50A0A1B0GTY4 177 aa11.69□□□□□ -0.54
USP44-203ENST00000537435 NUPR1O60356 82 aa11.69□□□□□ -0.54
USP44-203ENST00000537435 IRF2P14316 349 aa11.69□□□□□ -0.54
USP44-203ENST00000537435 GATA2P23769 480 aaPredicted RBP11.69□□□□□ -0.54
USP44-203ENST00000537435 IGF2-ASQ6U949 168 aa11.69□□□□□ -0.54
USP44-203ENST00000537435 Q6ZS92 163 aa11.69□□□□□ -0.54
USP44-203ENST00000537435 NOL4LQ96MY1 436 aaPredicted RBP11.69□□□□□ -0.54
USP44-203ENST00000537435 OTOGLQ3ZCN5 2332 aa11.69□□□□□ -0.54
USP44-203ENST00000537435 OR4A8P0C604 315 aa11.68□□□□□ -0.54
USP44-203ENST00000537435 SAA1P0DJI8 122 aaPredicted RBP11.68□□□□□ -0.54
USP44-203ENST00000537435 AREGP15514 252 aa11.68□□□□□ -0.54
USP44-203ENST00000537435 NDUFB7P17568 137 aa11.68□□□□□ -0.54
USP44-203ENST00000537435 LY96Q9Y6Y9 160 aa11.68□□□□□ -0.54
USP44-203ENST00000537435 hADV38S2A0JD32 116 aa11.68□□□□□ -0.54
USP44-203ENST00000537435 GRIFINA4D1Z8 144 aa11.68□□□□□ -0.54
USP44-203ENST00000537435 CBLN1P23435 193 aa11.68□□□□□ -0.54
USP44-203ENST00000537435 OR10J1P30954 320 aa11.68□□□□□ -0.54
USP44-203ENST00000537435 MLANAQ16655 118 aa11.68□□□□□ -0.54
USP44-203ENST00000537435 IQCJQ1A5X6 159 aa11.68□□□□□ -0.54
USP44-203ENST00000537435 TMEM30BQ3MIR4 351 aa11.68□□□□□ -0.54
USP44-203ENST00000537435 TEX36Q5VZQ5 186 aa11.68□□□□□ -0.54
USP44-203ENST00000537435 ZNF600Q6ZNG1 722 aa11.68□□□□□ -0.54
USP44-203ENST00000537435 TMEM167BQ9NRX6 74 aa11.68□□□□□ -0.54
USP44-203ENST00000537435 BOD1L1Q8NFC6 3051 aa11.68□□□□□ -0.54
USP44-203ENST00000537435 A8MXE2 369 aa11.67□□□□□ -0.54
USP44-203ENST00000537435 CRYBB3P26998 211 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms