RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 KLF5Q13887 457 aaPredicted RBP12.93□□□□□ -0.34
CHFR-213ENST00000536843 TREML4Q6UXN2 200 aa12.93□□□□□ -0.34
CHFR-213ENST00000536843 ZNF488Q96MN9 340 aa12.93□□□□□ -0.34
CHFR-213ENST00000536843 MGST2Q99735 147 aa12.93□□□□□ -0.34
CHFR-213ENST00000536843 C1RLQ9NZP8 487 aa12.93□□□□□ -0.34
CHFR-213ENST00000536843 ARL2-SNX15V9GYD0 113 aa12.93□□□□□ -0.34
CHFR-213ENST00000536843 NDUFS8O00217 210 aa12.92□□□□□ -0.34
CHFR-213ENST00000536843 ZNHIT1O43257 154 aa12.92□□□□□ -0.34
CHFR-213ENST00000536843 CD5LO43866 347 aa12.92□□□□□ -0.34
CHFR-213ENST00000536843 NEURL1O76050 574 aa12.92□□□□□ -0.34
CHFR-213ENST00000536843 RPL30P62888 115 aaKnown RBP12.92□□□□□ -0.34
CHFR-213ENST00000536843 PDLIM3Q53GG5 364 aaPredicted RBP12.92□□□□□ -0.34
CHFR-213ENST00000536843 MRPL54Q6P161 138 aaKnown RBP12.92□□□□□ -0.34
CHFR-213ENST00000536843 RASL11AQ6T310 242 aa12.92□□□□□ -0.34
CHFR-213ENST00000536843 ZNF497Q6ZNH5 498 aa12.92□□□□□ -0.34
CHFR-213ENST00000536843 WIPF2Q8TF74 440 aaPredicted RBP12.92□□□□□ -0.34
CHFR-213ENST00000536843 ZNF430Q9H8G1 570 aaPredicted RBP12.92□□□□□ -0.34
CHFR-213ENST00000536843 DOCK10Q96BY6 2186 aa12.92□□□□□ -0.34
CHFR-213ENST00000536843 MUC21A0A0G2JKD1 596 aa12.92□□□□□ -0.34
CHFR-213ENST00000536843 MUC21A0A140T8X8 626 aa12.92□□□□□ -0.34
CHFR-213ENST00000536843 CELA3BP08861 270 aa12.92□□□□□ -0.34
CHFR-213ENST00000536843 SLAQ13239 276 aa12.92□□□□□ -0.34
CHFR-213ENST00000536843 MUC21Q5SSG8 566 aa12.92□□□□□ -0.34
CHFR-213ENST00000536843 C9orf135Q5VTT2 229 aa12.92□□□□□ -0.34
CHFR-213ENST00000536843 MIC13Q5XKP0 118 aa12.92□□□□□ -0.34
CHFR-213ENST00000536843 NINJ1Q92982 152 aa12.92□□□□□ -0.34
CHFR-213ENST00000536843 RNASE7Q9H1E1 156 aaKnown RBP12.92□□□□□ -0.34
CHFR-213ENST00000536843 IZUMO1RA6ND01 250 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 CRXO43186 299 aaPredicted RBP12.91□□□□□ -0.34
CHFR-213ENST00000536843 MRPL33O75394 65 aaKnown RBP12.91□□□□□ -0.34
CHFR-213ENST00000536843 SSTR5P35346 364 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 TCL1AP56279 114 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 ARF1P84077 181 aaKnown RBP12.91□□□□□ -0.34
CHFR-213ENST00000536843 SPINK9Q5DT21 86 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 Q6P435 159 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 SPATA12Q7Z6I5 190 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 SPACA3Q8IXA5 215 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 TMEM45BQ96B21 275 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 FAM173AQ9BQD7 235 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 TECRQ9NZ01 308 aaKnown RBP12.91□□□□□ -0.34
CHFR-213ENST00000536843 GPR179Q6PRD1 2367 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 TMEM238LA0A1B0GVL6 79 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 HELTA6NFD8 242 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 IGLC1P0CG04 106 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 USF1P22415 310 aaPredicted RBP12.91□□□□□ -0.34
CHFR-213ENST00000536843 NPY1RP25929 384 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 ARR3P36575 388 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 TMPRSS3P57727 454 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 BRWD1-AS2P59051 145 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 CATR1Q13166 79 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 ABHD17BQ5VST6 288 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 PET117Q6UWS5 81 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 H2BFWTQ7Z2G1 175 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 DOLPP1Q86YN1 238 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 C5orf30Q96GV9 206 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 TMEM70Q9BUB7 260 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 MBNL3Q9NUK0 354 aaKnown RBP12.91□□□□□ -0.34
CHFR-213ENST00000536843 KCNIP1Q9NZI2 227 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 TRAPPC2LQ9UL33 140 aa12.91□□□□□ -0.34
CHFR-213ENST00000536843 TNRC6AQ8NDV7 1962 aaKnown RBP12.9□□□□□ -0.34
CHFR-213ENST00000536843 CA7P43166 264 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 REG1BP48304 166 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 RIPPLY3P57055 190 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 GTF3C1Q12789 2109 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 FXYD3Q14802 87 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 SMIM21Q3B7S5 101 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 SLC25A34Q6PIV7 304 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 PQLC2Q6ZP29 291 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 SAP30LQ9HAJ7 183 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 TNFRSF19Q9NS68 423 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 PEF1Q9UBV8 284 aaKnown RBP12.9□□□□□ -0.34
CHFR-213ENST00000536843 TP73-AS1Q9UF72 201 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 AHCTF1Q8WYP5 2266 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 A0A096LPE4 126 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 LOC102724200A0A096LPH7 203 aaPredicted RBP12.9□□□□□ -0.34
CHFR-213ENST00000536843 A0A1W2PPZ6 126 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 OR4C46A6NHA9 309 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 RBMXL2O75526 392 aaKnown RBP12.9□□□□□ -0.34
CHFR-213ENST00000536843 TNFSF15O95150 251 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 HLA-DRB1P01911 266 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 TIGITQ495A1 244 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 C1orf185Q5T7R7 199 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 MRPL21Q7Z2W9 205 aaKnown RBP12.9□□□□□ -0.34
CHFR-213ENST00000536843 UBALD1Q8TB05 177 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 ST6GALNAC6Q969X2 333 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 COMMD5Q9GZQ3 224 aa12.9□□□□□ -0.34
CHFR-213ENST00000536843 ZNF331Q9NQX6 463 aaPredicted RBP12.9□□□□□ -0.34
CHFR-213ENST00000536843 ZNF407Q9C0G0 2248 aa12.89□□□□□ -0.35
CHFR-213ENST00000536843 IGKV3D-15A0A087WSY6 115 aa12.89□□□□□ -0.35
CHFR-213ENST00000536843 C17orf98A8MV24 154 aa12.89□□□□□ -0.35
CHFR-213ENST00000536843 SAP30O75446 220 aa12.89□□□□□ -0.35
CHFR-213ENST00000536843 FOXG1P55316 489 aaPredicted RBP12.89□□□□□ -0.35
CHFR-213ENST00000536843 OR1C1Q15619 314 aa12.89□□□□□ -0.35
CHFR-213ENST00000536843 LINC00696Q6ZRV3 163 aa12.89□□□□□ -0.35
CHFR-213ENST00000536843 TUSC5Q8IXB3 177 aa12.89□□□□□ -0.35
CHFR-213ENST00000536843 TNFRSF14Q92956 283 aa12.89□□□□□ -0.35
CHFR-213ENST00000536843 TRAV8-6A0A0B4J262 113 aa12.89□□□□□ -0.35
CHFR-213ENST00000536843 PRSS46E5RG02 174 aa12.89□□□□□ -0.35
CHFR-213ENST00000536843 CRYBB3P26998 211 aa12.89□□□□□ -0.35
CHFR-213ENST00000536843 MAGEA5P43359 124 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms