RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 CEACAM8P31997 349 aaPredicted RBP13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 SLC25A48Q6ZT89 311 aaKnown RBP13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 OCC1Q8TAD7 63 aa13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 CCL13Q99616 98 aa13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 RPUSD1Q9UJJ7 312 aaKnown RBP13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 TP53TG5Q9Y2B4 290 aa13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 YTHDF2Q9Y5A9 579 aaKnown RBP13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 TRAPPC1Q9Y5R8 145 aa13.14□□□□□ -0.31
CHMP1A-202ENST00000535997 SCO2A0A1W2PP80 73 aa13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 CRYABP02511 175 aaKnown RBP13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 CNN1P51911 297 aaKnown RBP13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 TMEM18Q96B42 140 aa13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 ELOVL5Q9NYP7 299 aa13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 A8MXE2 369 aa13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 UPK2O00526 184 aa13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 CT45A6P0DMU7 189 aa13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 CT45A5P0DMU8 189 aa13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 CT45A7P0DMV0 189 aa13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 IRF2P14316 349 aa13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 CD40P25942 277 aa13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 RPL31P62899 125 aaKnown RBP13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 PRCDQ00LT1 54 aa13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 FAM27E3Q08E93 113 aa13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 RTL8BQ17RB0 113 aa13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 TEX36Q5VZQ5 186 aa13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 HINT2Q9BX68 163 aa13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 PLEKHA3Q9HB20 300 aa13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 FKBP11Q9NYL4 201 aa13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 TNCP24821 2201 aa13.13□□□□□ -0.31
CHMP1A-202ENST00000535997 RP1L1Q8IWN7 2480 aaPredicted RBP13.12□□□□□ -0.31
CHMP1A-202ENST00000535997 LINC00869P0C866 280 aa13.12□□□□□ -0.31
CHMP1A-202ENST00000535997 AREGP15514 252 aa13.12□□□□□ -0.31
CHMP1A-202ENST00000535997 GPX4P36969 197 aaPredicted RBP13.12□□□□□ -0.31
CHMP1A-202ENST00000535997 TEX38Q6PEX7 206 aa13.12□□□□□ -0.31
CHMP1A-202ENST00000535997 OR10G8Q8NGN5 311 aa13.12□□□□□ -0.31
CHMP1A-202ENST00000535997 C11orf52Q96A22 123 aa13.12□□□□□ -0.31
CHMP1A-202ENST00000535997 UHRF2Q96PU4 802 aa13.12□□□□□ -0.31
CHMP1A-202ENST00000535997 LY96Q9Y6Y9 160 aa13.12□□□□□ -0.31
CHMP1A-202ENST00000535997 ARL2-SNX15V9GYD0 113 aa13.12□□□□□ -0.31
CHMP1A-202ENST00000535997 hADV38S2A0JD32 116 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 IGFBP2P18065 325 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 DDTP30046 118 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 CCKARP32238 428 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 GNG10P50151 68 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 KRTCAP3Q53RY4 240 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 SPATA31B1PQ5VZV4 182 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 C22orf34Q6ZV56 151 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 NUP37Q8NFH4 326 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 OR4P4Q8NGL7 312 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 SLC25A10Q9UBX3 287 aaPredicted RBP13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 SLC45A2Q9UMX9 530 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 YLPM1P49750 1951 aaKnown RBP13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 DYSFO75923 2080 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 C9JCJ5 164 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 FOXH1O75593 365 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 MMP23AO75900 390 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 IGKV1-16P04430 117 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 FAM216BQ8N7L0 139 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 C14orf144Q96I85 54 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 SLC35D1Q9NTN3 355 aa13.11□□□□□ -0.31
CHMP1A-202ENST00000535997 TRAV9-1A0A075B6T8 112 aa13.1□□□□□ -0.31
CHMP1A-202ENST00000535997 SRRM4A7MD48 611 aaKnown RBP13.1□□□□□ -0.31
CHMP1A-202ENST00000535997 MYOD1P15172 320 aa13.1□□□□□ -0.31
CHMP1A-202ENST00000535997 YPEL3P61236 119 aaPredicted RBP13.1□□□□□ -0.31
CHMP1A-202ENST00000535997 OR5B3Q8NH48 314 aa13.1□□□□□ -0.31
CHMP1A-202ENST00000535997 C19orf24Q9BVV8 132 aa13.1□□□□□ -0.31
CHMP1A-202ENST00000535997 BET1LQ9NYM9 111 aa13.1□□□□□ -0.31
CHMP1A-202ENST00000535997 LINC00312Q9Y6C7 94 aa13.1□□□□□ -0.31
CHMP1A-202ENST00000535997 TEX50A0A1B0GTY4 177 aa13.1□□□□□ -0.31
CHMP1A-202ENST00000535997 PAX1P15863 534 aa13.1□□□□□ -0.31
CHMP1A-202ENST00000535997 PRSS8Q16651 343 aa13.1□□□□□ -0.31
CHMP1A-202ENST00000535997 C2orf83Q53S99 150 aa13.1□□□□□ -0.31
CHMP1A-202ENST00000535997 LRFN3Q9BTN0 628 aa13.1□□□□□ -0.31
CHMP1A-202ENST00000535997 TNFRSF1AP19438 455 aa13.09□□□□□ -0.31
CHMP1A-202ENST00000535997 GBGT1Q8N5D6 347 aa13.09□□□□□ -0.31
CHMP1A-202ENST00000535997 FAM57AQ8TBR7 257 aa13.09□□□□□ -0.31
CHMP1A-202ENST00000535997 SLC35E1Q96K37 410 aa13.09□□□□□ -0.31
CHMP1A-202ENST00000535997 NABP2Q9BQ15 211 aa13.09□□□□□ -0.31
CHMP1A-202ENST00000535997 TMEM167BQ9NRX6 74 aa13.09□□□□□ -0.31
CHMP1A-202ENST00000535997 MKRN2OSH3BPM6 223 aa13.09□□□□□ -0.31
CHMP1A-202ENST00000535997 TMEM108Q6UXF1 575 aa13.09□□□□□ -0.31
CHMP1A-202ENST00000535997 PNKDQ8N490 385 aa13.09□□□□□ -0.31
CHMP1A-202ENST00000535997 RBMXL3Q8N7X1 1067 aaKnown RBP13.09□□□□□ -0.31
CHMP1A-202ENST00000535997 OSR1Q8TAX0 266 aaPredicted RBP13.09□□□□□ -0.31
CHMP1A-202ENST00000535997 PRO1933Q9H354 126 aa13.09□□□□□ -0.31
CHMP1A-202ENST00000535997 GAL3ST2Q9H3Q3 398 aa13.09□□□□□ -0.31
CHMP1A-202ENST00000535997 DMXL1Q9Y485 3027 aa13.08□□□□□ -0.31
CHMP1A-202ENST00000535997 LAMA5O15230 3695 aa13.08□□□□□ -0.32
CHMP1A-202ENST00000535997 A0A087X0M5 115 aa13.08□□□□□ -0.32
CHMP1A-202ENST00000535997 A0A1B0GX30 115 aa13.08□□□□□ -0.32
CHMP1A-202ENST00000535997 OR4A8P0C604 315 aa13.08□□□□□ -0.32
CHMP1A-202ENST00000535997 MEF2CQ06413 473 aaPredicted RBP13.08□□□□□ -0.32
CHMP1A-202ENST00000535997 ZNF833PQ6ZTB9 187 aa13.08□□□□□ -0.32
CHMP1A-202ENST00000535997 MIR17HGQ75NE6 70 aa13.08□□□□□ -0.32
CHMP1A-202ENST00000535997 REC114Q7Z4M0 266 aa13.08□□□□□ -0.32
CHMP1A-202ENST00000535997 OR1L8Q8NGR8 309 aa13.08□□□□□ -0.32
CHMP1A-202ENST00000535997 RAI1Q7Z5J4 1906 aaPredicted RBP13.08□□□□□ -0.32
CHMP1A-202ENST00000535997 MAP1BP46821 2468 aaKnown RBP13.08□□□□□ -0.32
CHMP1A-202ENST00000535997 NDUFB7P17568 137 aa13.08□□□□□ -0.32
CHMP1A-202ENST00000535997 TECRQ9NZ01 308 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms