RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 LRBAP50851 2863 aa10.92□□□□□ -0.66
VPS33B-202ENST00000535906 PPP1R2P9O14990 202 aa10.92□□□□□ -0.66
VPS33B-202ENST00000535906 HRASP01112 189 aa10.92□□□□□ -0.66
VPS33B-202ENST00000535906 PFN1P07737 140 aaKnown RBP10.92□□□□□ -0.66
VPS33B-202ENST00000535906 GRNP28799 593 aaKnown RBP10.92□□□□□ -0.66
VPS33B-202ENST00000535906 HSPE1P61604 102 aaKnown RBP10.92□□□□□ -0.66
VPS33B-202ENST00000535906 POU2AF1Q16633 256 aa10.92□□□□□ -0.66
VPS33B-202ENST00000535906 TMEM249Q2WGJ8 235 aa10.92□□□□□ -0.66
VPS33B-202ENST00000535906 TREML4Q6UXN2 200 aa10.92□□□□□ -0.66
VPS33B-202ENST00000535906 NEIL1Q96FI4 390 aaPredicted RBP10.92□□□□□ -0.66
VPS33B-202ENST00000535906 MS4A5Q9H3V2 200 aa10.92□□□□□ -0.66
VPS33B-202ENST00000535906 SLC35D1Q9NTN3 355 aa10.92□□□□□ -0.66
VPS33B-202ENST00000535906 ATRXP46100 2492 aa10.92□□□□□ -0.66
VPS33B-202ENST00000535906 IL6RP08887 468 aaPredicted RBP10.92□□□□□ -0.66
VPS33B-202ENST00000535906 APOBEC3AP31941 199 aaPredicted RBP10.92□□□□□ -0.66
VPS33B-202ENST00000535906 GCSAMLQ5JQS6 135 aa10.92□□□□□ -0.66
VPS33B-202ENST00000535906 HIST3H2BBQ8N257 126 aa10.92□□□□□ -0.66
VPS33B-202ENST00000535906 OR10A7Q8NGE5 316 aa10.92□□□□□ -0.66
VPS33B-202ENST00000535906 PYGO2Q9BRQ0 406 aa10.92□□□□□ -0.66
VPS33B-202ENST00000535906 NBASA2RRP1 2371 aa10.91□□□□□ -0.66
VPS33B-202ENST00000535906 FAM90A27PA6NNH2 459 aa10.91□□□□□ -0.66
VPS33B-202ENST00000535906 C11orf94C9JXX5 98 aa10.91□□□□□ -0.66
VPS33B-202ENST00000535906 DVL1O14640 695 aa10.91□□□□□ -0.66
VPS33B-202ENST00000535906 NDUFB3O43676 98 aa10.91□□□□□ -0.66
VPS33B-202ENST00000535906 CD3EP07766 207 aa10.91□□□□□ -0.66
VPS33B-202ENST00000535906 SOD3P08294 240 aa10.91□□□□□ -0.66
VPS33B-202ENST00000535906 CA7P43166 264 aa10.91□□□□□ -0.66
VPS33B-202ENST00000535906 ZNF833PQ6ZTB9 187 aa10.91□□□□□ -0.66
VPS33B-202ENST00000535906 OR51G1Q8NGK1 321 aa10.91□□□□□ -0.66
VPS33B-202ENST00000535906 SRD5A3Q9H8P0 318 aa10.91□□□□□ -0.66
VPS33B-202ENST00000535906 H7BYZ3 331 aa10.9□□□□□ -0.66
VPS33B-202ENST00000535906 VENTXO95231 258 aa10.9□□□□□ -0.66
VPS33B-202ENST00000535906 OPRK1P41145 380 aa10.9□□□□□ -0.66
VPS33B-202ENST00000535906 UCNP55089 124 aa10.9□□□□□ -0.66
VPS33B-202ENST00000535906 RTL8BQ17RB0 113 aa10.9□□□□□ -0.66
VPS33B-202ENST00000535906 LRRC10Q5BKY1 277 aa10.9□□□□□ -0.66
VPS33B-202ENST00000535906 PYY3Q5JQD4 70 aa10.9□□□□□ -0.66
VPS33B-202ENST00000535906 OR51B2Q9Y5P1 312 aa10.9□□□□□ -0.66
VPS33B-202ENST00000535906 IGHV2-70P01814 119 aa10.9□□□□□ -0.66
VPS33B-202ENST00000535906 CASP6P55212 293 aa10.9□□□□□ -0.66
VPS33B-202ENST00000535906 C4orf17Q53FE4 359 aa10.9□□□□□ -0.66
VPS33B-202ENST00000535906 GFI1BQ5VTD9 330 aa10.9□□□□□ -0.66
VPS33B-202ENST00000535906 ANAPC16Q96DE5 110 aa10.9□□□□□ -0.66
VPS33B-202ENST00000535906 C1orf159Q96HA4 380 aa10.9□□□□□ -0.66
VPS33B-202ENST00000535906 OR5B12Q96R08 314 aa10.9□□□□□ -0.66
VPS33B-202ENST00000535906 HINT2Q9BX68 163 aa10.9□□□□□ -0.66
VPS33B-202ENST00000535906 MRPL20Q9BYC9 149 aaKnown RBP10.9□□□□□ -0.66
VPS33B-202ENST00000535906 DCHS2Q6V1P9 2916 aa10.9□□□□□ -0.67
VPS33B-202ENST00000535906 IGHV1-69-2A0A0G2JMI3 117 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 A0A1W2PPV4 95 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 CCL21O00585 134 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 SIAH2O43255 324 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 PDE6DO43924 150 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 LOXP28300 417 aaPredicted RBP10.89□□□□□ -0.67
VPS33B-202ENST00000535906 GALR1P47211 349 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 REG1BP48304 166 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 EFNB3Q15768 340 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 SLC24A4Q8NFF2 622 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 MGST2Q99735 147 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 GPR61Q9BZJ8 451 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 B9A039 149 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 UPK2O00526 184 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 CA2P00918 260 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 NPPCP23582 126 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 NPY1RP25929 384 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 DIAPH2-AS1Q14236 149 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 CDSNQ15517 529 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 ARSJQ5FYB0 599 aaPredicted RBP10.89□□□□□ -0.67
VPS33B-202ENST00000535906 NECAP1Q8NC96 275 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 KAAG1Q9UBP8 84 aa10.89□□□□□ -0.67
VPS33B-202ENST00000535906 ANKHD1Q8IWZ3 2542 aaKnown RBP10.89□□□□□ -0.67
VPS33B-202ENST00000535906 J3QR06 171 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 SAA1P0DJI8 122 aaPredicted RBP10.88□□□□□ -0.67
VPS33B-202ENST00000535906 OR10D4PQ8NGN7 298 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 OR4X1Q8NH49 305 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 GGTLC1Q9BX51 225 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 PATZ1Q9HBE1 687 aaKnown RBP10.88□□□□□ -0.67
VPS33B-202ENST00000535906 ENY2Q9NPA8 101 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 PRNDQ9UKY0 176 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 LYNX1G3V0Z9 82 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 H0YJW9 148 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 LYNX1P0DP58 116 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 CHRNB4P30926 498 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 DLX6P56179 175 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 KLRB1Q12918 225 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 FBXL19-AS1Q494R0 122 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 PDZD11Q5EBL8 140 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 NPVFQ9HCQ7 196 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 KCNIP2Q9NS61 270 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 PITPNC1Q9UKF7 332 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 LSM4Q9Y4Z0 139 aaKnown RBP10.88□□□□□ -0.67
VPS33B-202ENST00000535906 DMRT1Q9Y5R6 373 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 PXMP4Q9Y6I8 212 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 ABCA4P78363 2273 aa10.88□□□□□ -0.67
VPS33B-202ENST00000535906 MIC13Q5XKP0 118 aa10.87□□□□□ -0.67
VPS33B-202ENST00000535906 ST6GALNAC3Q8NDV1 305 aa10.87□□□□□ -0.67
VPS33B-202ENST00000535906 OR5AN1Q8NGI8 311 aa10.87□□□□□ -0.67
VPS33B-202ENST00000535906 ZNF257Q9Y2Q1 563 aa10.87□□□□□ -0.67
VPS33B-202ENST00000535906 TPRP12270 2363 aaKnown RBP10.87□□□□□ -0.67
VPS33B-202ENST00000535906 TEX50A0A1B0GTY4 177 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms