RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 ZNF355PQ9NSJ1 428 aa12.58□□□□□ -0.4
ATL3-202ENST00000535789 COA4Q9NYJ1 87 aa12.58□□□□□ -0.4
ATL3-202ENST00000535789 C7orf66A4D0T2 115 aa12.57□□□□□ -0.4
ATL3-202ENST00000535789 HMX3A6NHT5 357 aa12.57□□□□□ -0.4
ATL3-202ENST00000535789 PRAF2O60831 178 aa12.57□□□□□ -0.4
ATL3-202ENST00000535789 PGLYRP1O75594 196 aaPredicted RBP12.57□□□□□ -0.4
ATL3-202ENST00000535789 OR2A4O95047 310 aa12.57□□□□□ -0.4
ATL3-202ENST00000535789 DHFRP00374 187 aa12.57□□□□□ -0.4
ATL3-202ENST00000535789 HSPB1P04792 205 aaKnown RBP12.57□□□□□ -0.4
ATL3-202ENST00000535789 OR4E1P0C645 316 aa12.57□□□□□ -0.4
ATL3-202ENST00000535789 OR9G9P0C7N8 305 aa12.57□□□□□ -0.4
ATL3-202ENST00000535789 AKR1C4P17516 323 aa12.57□□□□□ -0.4
ATL3-202ENST00000535789 TATDN3Q17R31 274 aa12.57□□□□□ -0.4
ATL3-202ENST00000535789 TMEM128Q5BJH2 165 aa12.57□□□□□ -0.4
ATL3-202ENST00000535789 OR4A47Q6IF82 309 aa12.57□□□□□ -0.4
ATL3-202ENST00000535789 TBC1D26Q86UD7 250 aa12.57□□□□□ -0.4
ATL3-202ENST00000535789 SPAG16Q8N0X2 631 aa12.57□□□□□ -0.4
ATL3-202ENST00000535789 OR51H1Q8NH63 302 aa12.57□□□□□ -0.4
ATL3-202ENST00000535789 TMEM68Q96MH6 324 aa12.57□□□□□ -0.4
ATL3-202ENST00000535789 OR2A7Q96R45 310 aa12.57□□□□□ -0.4
ATL3-202ENST00000535789 SEC22CQ9BRL7 303 aa12.57□□□□□ -0.4
ATL3-202ENST00000535789 NAA60Q9H7X0 242 aa12.57□□□□□ -0.4
ATL3-202ENST00000535789 TRBV9A0A0B4J1U6 114 aa12.56□□□□□ -0.4
ATL3-202ENST00000535789 TRAV3A0A0B4J244 114 aa12.56□□□□□ -0.4
ATL3-202ENST00000535789 A0A1B0GVG6 124 aa12.56□□□□□ -0.4
ATL3-202ENST00000535789 MPPED1O15442 326 aa12.56□□□□□ -0.4
ATL3-202ENST00000535789 RBFOX2O43251 390 aaKnown RBP eCLIP12.56□□□□□ -0.4
ATL3-202ENST00000535789 S1PR2O95136 353 aa12.56□□□□□ -0.4
ATL3-202ENST00000535789 ACSM6Q6P461 480 aa12.56□□□□□ -0.4
ATL3-202ENST00000535789 LYG2Q86SG7 212 aa12.56□□□□□ -0.4
ATL3-202ENST00000535789 HAPLN4Q86UW8 402 aa12.56□□□□□ -0.4
ATL3-202ENST00000535789 OR52B4Q8NGK2 314 aa12.56□□□□□ -0.4
ATL3-202ENST00000535789 LSM4Q9Y4Z0 139 aaKnown RBP12.56□□□□□ -0.4
ATL3-202ENST00000535789 ALG5Q9Y673 324 aa12.56□□□□□ -0.4
ATL3-202ENST00000535789 C9orf170A2RU37 121 aa12.55□□□□□ -0.4
ATL3-202ENST00000535789 ANKRD34BA5PLL1 514 aa12.55□□□□□ -0.4
ATL3-202ENST00000535789 AREGP15514 252 aa12.55□□□□□ -0.4
ATL3-202ENST00000535789 KIR2DS2P43631 304 aa12.55□□□□□ -0.4
ATL3-202ENST00000535789 DHRS2Q13268 280 aa12.55□□□□□ -0.4
ATL3-202ENST00000535789 POU2AF1Q16633 256 aa12.55□□□□□ -0.4
ATL3-202ENST00000535789 C4orf46Q504U0 113 aa12.55□□□□□ -0.4
ATL3-202ENST00000535789 C11orf87Q6NUJ2 197 aa12.55□□□□□ -0.4
ATL3-202ENST00000535789 ZNF343Q6P1L6 599 aa12.55□□□□□ -0.4
ATL3-202ENST00000535789 TTC9CQ8N5M4 171 aa12.55□□□□□ -0.4
ATL3-202ENST00000535789 GALNT14Q96FL9 552 aa12.55□□□□□ -0.4
ATL3-202ENST00000535789 BET1LQ9NYM9 111 aa12.55□□□□□ -0.4
ATL3-202ENST00000535789 TEX13DA0A0J9YY54 714 aaPredicted RBP12.54□□□□□ -0.4
ATL3-202ENST00000535789 C13orf42A0A1B0GVH6 325 aa12.54□□□□□ -0.4
ATL3-202ENST00000535789 H0Y980 276 aa12.54□□□□□ -0.4
ATL3-202ENST00000535789 SFT2D2O95562 160 aa12.54□□□□□ -0.4
ATL3-202ENST00000535789 HLA-AP01891 365 aaKnown RBP12.54□□□□□ -0.4
ATL3-202ENST00000535789 F2RP25116 425 aa12.54□□□□□ -0.4
ATL3-202ENST00000535789 S100GP29377 79 aa12.54□□□□□ -0.4
ATL3-202ENST00000535789 RPL27AP46776 148 aaKnown RBP12.54□□□□□ -0.4
ATL3-202ENST00000535789 RHOGP84095 191 aa12.54□□□□□ -0.4
ATL3-202ENST00000535789 CATR1Q13166 79 aa12.54□□□□□ -0.4
ATL3-202ENST00000535789 SGPP2Q8IWX5 399 aa12.54□□□□□ -0.4
ATL3-202ENST00000535789 VSTM2AQ8TAG5 236 aa12.54□□□□□ -0.4
ATL3-202ENST00000535789 TP53RKQ96S44 253 aa12.54□□□□□ -0.4
ATL3-202ENST00000535789 TENM3Q9P273 2699 aa12.54□□□□□ -0.4
ATL3-202ENST00000535789 C3orf85A0A1B0GTC6 90 aa12.53□□□□□ -0.4
ATL3-202ENST00000535789 SNRPGP15A8MWD9 76 aa12.53□□□□□ -0.4
ATL3-202ENST00000535789 CREBL2O60519 120 aaPredicted RBP12.53□□□□□ -0.4
ATL3-202ENST00000535789 SAP30O75446 220 aa12.53□□□□□ -0.4
ATL3-202ENST00000535789 HPRT1P00492 218 aa12.53□□□□□ -0.4
ATL3-202ENST00000535789 HRASP01112 189 aa12.53□□□□□ -0.4
ATL3-202ENST00000535789 OR5AC1P0C628 307 aa12.53□□□□□ -0.4
ATL3-202ENST00000535789 RPA2P15927 270 aa12.53□□□□□ -0.4
ATL3-202ENST00000535789 VAMP1P23763 118 aa12.53□□□□□ -0.4
ATL3-202ENST00000535789 RPL8P62917 257 aaKnown RBP12.53□□□□□ -0.4
ATL3-202ENST00000535789 TMEM187Q14656 261 aa12.53□□□□□ -0.4
ATL3-202ENST00000535789 ZNF585BQ52M93 769 aa12.53□□□□□ -0.4
ATL3-202ENST00000535789 DEFB121Q5J5C9 76 aa12.53□□□□□ -0.4
ATL3-202ENST00000535789 IL34Q6ZMJ4 242 aa12.53□□□□□ -0.4
ATL3-202ENST00000535789 ZNF431Q8TF32 576 aaPredicted RBP12.53□□□□□ -0.4
ATL3-202ENST00000535789 SPIN2AQ99865 258 aa12.53□□□□□ -0.4
ATL3-202ENST00000535789 SPIN2BQ9BPZ2 258 aa12.53□□□□□ -0.4
ATL3-202ENST00000535789 TMEM140Q9NV12 185 aa12.53□□□□□ -0.4
ATL3-202ENST00000535789 ZNF256Q9Y2P7 627 aaPredicted RBP12.53□□□□□ -0.4
ATL3-202ENST00000535789 DMRT1Q9Y5R6 373 aa12.53□□□□□ -0.4
ATL3-202ENST00000535789 A0A0G2JLM5 398 aa12.52□□□□□ -0.41
ATL3-202ENST00000535789 NPIPB5A8MRT5 1133 aa12.52□□□□□ -0.41
ATL3-202ENST00000535789 BMPR1BO00238 502 aa12.52□□□□□ -0.41
ATL3-202ENST00000535789 B3GALNT1O75752 331 aa12.52□□□□□ -0.41
ATL3-202ENST00000535789 ACTL6BO94805 426 aa12.52□□□□□ -0.41
ATL3-202ENST00000535789 HLA-GP17693 338 aa12.52□□□□□ -0.41
ATL3-202ENST00000535789 INSL3P51460 131 aa12.52□□□□□ -0.41
ATL3-202ENST00000535789 EXOSC2Q13868 293 aaKnown RBP12.52□□□□□ -0.41
ATL3-202ENST00000535789 KLF5Q13887 457 aaPredicted RBP12.52□□□□□ -0.41
ATL3-202ENST00000535789 ANKRD55Q3KP44 614 aa12.52□□□□□ -0.41
ATL3-202ENST00000535789 SP6Q3SY56 376 aa12.52□□□□□ -0.41
ATL3-202ENST00000535789 ZNF429Q86V71 674 aa12.52□□□□□ -0.41
ATL3-202ENST00000535789 GLYATL2Q8WU03 294 aa12.52□□□□□ -0.41
ATL3-202ENST00000535789 MITD1Q8WV92 249 aa12.52□□□□□ -0.41
ATL3-202ENST00000535789 FANCD2OSQ96PS1 177 aa12.52□□□□□ -0.41
ATL3-202ENST00000535789 FYTTD1Q96QD9 318 aaKnown RBP12.52□□□□□ -0.41
ATL3-202ENST00000535789 B9D2Q9BPU9 175 aa12.52□□□□□ -0.41
ATL3-202ENST00000535789 TMEM222Q9H0R3 208 aa12.52□□□□□ -0.41
ATL3-202ENST00000535789 PLEKHA2Q9HB19 425 aa12.52□□□□□ -0.41
ATL3-202ENST00000535789 GPN1Q9HCN4 374 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms