RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 MOGAT3Q86VF5 341 aa13.22□□□□□ -0.29
MCF2L-232ENST00000535094 OR5B3Q8NH48 314 aa13.22□□□□□ -0.29
MCF2L-232ENST00000535094 PIEZO2Q9H5I5 2752 aa13.22□□□□□ -0.29
MCF2L-232ENST00000535094 IGKV3D-15A0A087WSY6 115 aa13.21□□□□□ -0.29
MCF2L-232ENST00000535094 UBE2L3P68036 154 aaKnown RBP13.21□□□□□ -0.29
MCF2L-232ENST00000535094 EFNB3Q15768 340 aa13.21□□□□□ -0.29
MCF2L-232ENST00000535094 ETFRF1Q6IPR1 90 aa13.21□□□□□ -0.29
MCF2L-232ENST00000535094 FOXL1Q12952 345 aa13.21□□□□□ -0.29
MCF2L-232ENST00000535094 KRTAP27-1Q3LI81 207 aa13.21□□□□□ -0.29
MCF2L-232ENST00000535094 C5orf30Q96GV9 206 aa13.21□□□□□ -0.29
MCF2L-232ENST00000535094 RBM14Q96PK6 669 aaKnown RBP13.21□□□□□ -0.29
MCF2L-232ENST00000535094 TPPP3Q9BW30 176 aa13.21□□□□□ -0.29
MCF2L-232ENST00000535094 RAB4AP20338 218 aa13.21□□□□□ -0.3
MCF2L-232ENST00000535094 MLANAQ16655 118 aa13.21□□□□□ -0.3
MCF2L-232ENST00000535094 ZNF766Q5HY98 468 aa13.21□□□□□ -0.3
MCF2L-232ENST00000535094 IBA57Q5T440 356 aaKnown RBP13.21□□□□□ -0.3
MCF2L-232ENST00000535094 ACP7Q6ZNF0 438 aa13.21□□□□□ -0.3
MCF2L-232ENST00000535094 OR2D3Q8NGH3 330 aa13.21□□□□□ -0.3
MCF2L-232ENST00000535094 LPAR2Q9HBW0 351 aa13.21□□□□□ -0.3
MCF2L-232ENST00000535094 H3BTX0 84 aa13.2□□□□□ -0.3
MCF2L-232ENST00000535094 TNFSF13O75888 250 aa13.2□□□□□ -0.3
MCF2L-232ENST00000535094 RPL15P61313 204 aaKnown RBP13.2□□□□□ -0.3
MCF2L-232ENST00000535094 MRPS11P82912 194 aaKnown RBP13.2□□□□□ -0.3
MCF2L-232ENST00000535094 NRN1LQ496H8 165 aa13.2□□□□□ -0.3
MCF2L-232ENST00000535094 EAF1Q96JC9 268 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-232ENST00000535094 ZNF355PQ9NSJ1 428 aa13.2□□□□□ -0.3
MCF2L-232ENST00000535094 TECRQ9NZ01 308 aaKnown RBP13.2□□□□□ -0.3
MCF2L-232ENST00000535094 SH3BGRL2Q9UJC5 107 aa13.2□□□□□ -0.3
MCF2L-232ENST00000535094 J3QR06 171 aa13.2□□□□□ -0.3
MCF2L-232ENST00000535094 M0R2Z0 102 aa13.2□□□□□ -0.3
MCF2L-232ENST00000535094 CYC1P08574 325 aa13.2□□□□□ -0.3
MCF2L-232ENST00000535094 ZNF146Q15072 292 aa13.2□□□□□ -0.3
MCF2L-232ENST00000535094 OPN3Q9H1Y3 402 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-232ENST00000535094 MBNL3Q9NUK0 354 aaKnown RBP13.2□□□□□ -0.3
MCF2L-232ENST00000535094 FBXL7Q9UJT9 491 aa13.2□□□□□ -0.3
MCF2L-232ENST00000535094 SLC45A2Q9UMX9 530 aa13.2□□□□□ -0.3
MCF2L-232ENST00000535094 APCSP02743 223 aa13.2□□□□□ -0.3
MCF2L-232ENST00000535094 TCTAP57738 103 aa13.2□□□□□ -0.3
MCF2L-232ENST00000535094 Q6ZR03 302 aa13.2□□□□□ -0.3
MCF2L-232ENST00000535094 RBMXL3Q8N7X1 1067 aaKnown RBP13.2□□□□□ -0.3
MCF2L-232ENST00000535094 SSBP4Q9BWG4 385 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-232ENST00000535094 IL19Q9UHD0 177 aa13.2□□□□□ -0.3
MCF2L-232ENST00000535094 IGHV3-21A0A0B4J1V1 117 aa13.19□□□□□ -0.3
MCF2L-232ENST00000535094 M0R1B8 84 aa13.19□□□□□ -0.3
MCF2L-232ENST00000535094 STAG3L2P0CL84 134 aa13.19□□□□□ -0.3
MCF2L-232ENST00000535094 STAG3L3P0CL85 134 aa13.19□□□□□ -0.3
MCF2L-232ENST00000535094 SLC35E4Q6ICL7 350 aa13.19□□□□□ -0.3
MCF2L-232ENST00000535094 OR4S2Q8NH73 311 aa13.19□□□□□ -0.3
MCF2L-232ENST00000535094 LINC00479Q96M42 142 aa13.19□□□□□ -0.3
MCF2L-232ENST00000535094 NABP2Q9BQ15 211 aa13.19□□□□□ -0.3
MCF2L-232ENST00000535094 HCFC1P51610 2035 aa13.19□□□□□ -0.3
MCF2L-232ENST00000535094 TYMSP04818 313 aa13.19□□□□□ -0.3
MCF2L-232ENST00000535094 DUTP33316 252 aaKnown RBP13.19□□□□□ -0.3
MCF2L-232ENST00000535094 OPRK1P41145 380 aa13.19□□□□□ -0.3
MCF2L-232ENST00000535094 ZNF137PP52743 207 aa13.19□□□□□ -0.3
MCF2L-232ENST00000535094 STUMQ69YW2 141 aa13.19□□□□□ -0.3
MCF2L-232ENST00000535094 SELENOKQ9Y6D0 94 aa13.19□□□□□ -0.3
MCF2L-232ENST00000535094 MPDU1O75352 247 aa13.19□□□□□ -0.3
MCF2L-232ENST00000535094 IGHV1-2P23083 117 aa13.19□□□□□ -0.3
MCF2L-232ENST00000535094 ACSF3Q4G176 576 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-232ENST00000535094 DPRXA6NFQ7 191 aa13.18□□□□□ -0.3
MCF2L-232ENST00000535094 MLNRO43193 412 aa13.18□□□□□ -0.3
MCF2L-232ENST00000535094 CSN3P07498 182 aa13.18□□□□□ -0.3
MCF2L-232ENST00000535094 FOXA3P55318 350 aaPredicted RBP13.18□□□□□ -0.3
MCF2L-232ENST00000535094 TAS2R45P59539 299 aa13.18□□□□□ -0.3
MCF2L-232ENST00000535094 FER1L6-AS2Q96M78 137 aa13.18□□□□□ -0.3
MCF2L-232ENST00000535094 ENSAO43768 121 aaKnown RBP13.18□□□□□ -0.3
MCF2L-232ENST00000535094 ADH4P08319 380 aa13.18□□□□□ -0.3
MCF2L-232ENST00000535094 WDR82Q6UXN9 313 aa13.18□□□□□ -0.3
MCF2L-232ENST00000535094 COMMD5Q9GZQ3 224 aa13.18□□□□□ -0.3
MCF2L-232ENST00000535094 OR51B2Q9Y5P1 312 aa13.18□□□□□ -0.3
MCF2L-232ENST00000535094 UBE2G1P62253 170 aa13.18□□□□□ -0.3
MCF2L-232ENST00000535094 TCTEX1D1Q8N7M0 179 aa13.18□□□□□ -0.3
MCF2L-232ENST00000535094 OR4B1Q8NGF8 309 aa13.18□□□□□ -0.3
MCF2L-232ENST00000535094 TMEM210A6NLX4 147 aa13.17□□□□□ -0.3
MCF2L-232ENST00000535094 ORM2P19652 201 aa13.17□□□□□ -0.3
MCF2L-232ENST00000535094 KLHDC1Q8N7A1 406 aa13.17□□□□□ -0.3
MCF2L-232ENST00000535094 CBY3A6NI87 242 aa13.17□□□□□ -0.3
MCF2L-232ENST00000535094 K7EN84 100 aa13.17□□□□□ -0.3
MCF2L-232ENST00000535094 COX7A2P2O60397 106 aa13.17□□□□□ -0.3
MCF2L-232ENST00000535094 CD99P14209 185 aa13.17□□□□□ -0.3
MCF2L-232ENST00000535094 OR4C5Q8NGB2 326 aa13.17□□□□□ -0.3
MCF2L-232ENST00000535094 NPIPB11E5RHQ5 1161 aa13.17□□□□□ -0.3
MCF2L-232ENST00000535094 PDLIM4P50479 330 aa13.17□□□□□ -0.3
MCF2L-232ENST00000535094 WDR73Q6P4I2 378 aa13.17□□□□□ -0.3
MCF2L-232ENST00000535094 VWA1Q6PCB0 445 aa13.17□□□□□ -0.3
MCF2L-232ENST00000535094 TMEM178AQ8NBL3 297 aa13.17□□□□□ -0.3
MCF2L-232ENST00000535094 H1FXQ92522 213 aaKnown RBP13.17□□□□□ -0.3
MCF2L-232ENST00000535094 RNF2Q99496 336 aa13.17□□□□□ -0.3
MCF2L-232ENST00000535094 NCKAP5O14513 1909 aa13.16□□□□□ -0.3
MCF2L-232ENST00000535094 TRAV5A0A0B4J249 113 aa13.16□□□□□ -0.3
MCF2L-232ENST00000535094 PMS2P5A8MQ11 134 aa13.16□□□□□ -0.3
MCF2L-232ENST00000535094 NTN3O00634 580 aaPredicted RBP13.16□□□□□ -0.3
MCF2L-232ENST00000535094 BRWD1-AS2P59051 145 aa13.16□□□□□ -0.3
MCF2L-232ENST00000535094 UNQ5815/PRO19632Q6UWF5 114 aa13.16□□□□□ -0.3
MCF2L-232ENST00000535094 SLC35E1Q96K37 410 aa13.16□□□□□ -0.3
MCF2L-232ENST00000535094 RCHY1Q96PM5 261 aa13.16□□□□□ -0.3
MCF2L-232ENST00000535094 ZNRD1Q9P1U0 126 aa13.16□□□□□ -0.3
MCF2L-232ENST00000535094 UQCR10Q9UDW1 63 aa13.16□□□□□ -0.3
MCF2L-232ENST00000535094 MAJINQ3KP22 176 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms