RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 CX3CL1P78423 397 aa15.94■□□□□ 0.14
SMPD1-210ENST00000534405 TP73-AS1Q9UF72 201 aa15.94■□□□□ 0.14
SMPD1-210ENST00000534405 KNTC1P50748 2209 aa15.94■□□□□ 0.14
SMPD1-210ENST00000534405 PPIAL4EA0A075B759 164 aa15.94■□□□□ 0.14
SMPD1-210ENST00000534405 PPIAL4CA0A0B4J2A2 164 aa15.94■□□□□ 0.14
SMPD1-210ENST00000534405 C22orf46C9J442 243 aa15.94■□□□□ 0.14
SMPD1-210ENST00000534405 PPIAL4DF5H284 164 aa15.94■□□□□ 0.14
SMPD1-210ENST00000534405 PPIAL4FP0DN26 164 aa15.94■□□□□ 0.14
SMPD1-210ENST00000534405 RAB1CQ92928 201 aa15.94■□□□□ 0.14
SMPD1-210ENST00000534405 NPCDR1Q9BY65 106 aa15.94■□□□□ 0.14
SMPD1-210ENST00000534405 ABI3Q9P2A4 366 aa15.94■□□□□ 0.14
SMPD1-210ENST00000534405 B4GALT7Q9UBV7 327 aa15.94■□□□□ 0.14
SMPD1-210ENST00000534405 V9GYV3 84 aa15.94■□□□□ 0.14
SMPD1-210ENST00000534405 TRAPPC2LH3BP13 241 aa15.93■□□□□ 0.14
SMPD1-210ENST00000534405 GATA2P23769 480 aaPredicted RBP15.93■□□□□ 0.14
SMPD1-210ENST00000534405 GTF2H5Q6ZYL4 71 aa15.93■□□□□ 0.14
SMPD1-210ENST00000534405 ST6GALNAC6Q969X2 333 aa15.93■□□□□ 0.14
SMPD1-210ENST00000534405 LY96Q9Y6Y9 160 aa15.93■□□□□ 0.14
SMPD1-210ENST00000534405 ESPL1Q14674 2120 aa15.93■□□□□ 0.14
SMPD1-210ENST00000534405 C2orf70A6NJV1 201 aa15.93■□□□□ 0.14
SMPD1-210ENST00000534405 IGKV1-5P01602 117 aa15.93■□□□□ 0.14
SMPD1-210ENST00000534405 DEFA4P12838 97 aa15.93■□□□□ 0.14
SMPD1-210ENST00000534405 CA7P43166 264 aa15.93■□□□□ 0.14
SMPD1-210ENST00000534405 ATP6V0BQ99437 205 aa15.93■□□□□ 0.14
SMPD1-210ENST00000534405 ARRDC1-AS1Q9H2J1 176 aa15.93■□□□□ 0.14
SMPD1-210ENST00000534405 CLEC5AQ9NY25 188 aa15.93■□□□□ 0.14
SMPD1-210ENST00000534405 ATP23Q9Y6H3 246 aa15.93■□□□□ 0.14
SMPD1-210ENST00000534405 NCOR1O75376 2440 aa15.93■□□□□ 0.14
SMPD1-210ENST00000534405 SCO2A0A1W2PP80 73 aa15.92■□□□□ 0.14
SMPD1-210ENST00000534405 TFF3Q07654 80 aa15.92■□□□□ 0.14
SMPD1-210ENST00000534405 SLC25A34Q6PIV7 304 aa15.92■□□□□ 0.14
SMPD1-210ENST00000534405 PCSK4Q6UW60 755 aa15.92■□□□□ 0.14
SMPD1-210ENST00000534405 MKXQ8IYA7 352 aa15.92■□□□□ 0.14
SMPD1-210ENST00000534405 COMMD5Q9GZQ3 224 aa15.92■□□□□ 0.14
SMPD1-210ENST00000534405 R4GN57 208 aa15.92■□□□□ 0.14
SMPD1-210ENST00000534405 FRYQ5TBA9 3013 aa15.92■□□□□ 0.14
SMPD1-210ENST00000534405 HLA-DQA1P01909 254 aa15.92■□□□□ 0.14
SMPD1-210ENST00000534405 HLA-DRB1P01911 266 aa15.92■□□□□ 0.14
SMPD1-210ENST00000534405 NPY1RP25929 384 aa15.92■□□□□ 0.14
SMPD1-210ENST00000534405 OR5A2Q8NGI9 324 aa15.92■□□□□ 0.14
SMPD1-210ENST00000534405 OR51H1Q8NH63 302 aa15.92■□□□□ 0.14
SMPD1-210ENST00000534405 OR1L1Q8NH94 360 aa15.92■□□□□ 0.14
SMPD1-210ENST00000534405 FAM90A26D6RGX4 464 aa15.91■□□□□ 0.14
SMPD1-210ENST00000534405 RAB29O14966 203 aa15.91■□□□□ 0.14
SMPD1-210ENST00000534405 SMIM17P0DL12 118 aa15.91■□□□□ 0.14
SMPD1-210ENST00000534405 SSTR5P35346 364 aa15.91■□□□□ 0.14
SMPD1-210ENST00000534405 ARHGAP21Q5T5U3 1957 aa15.91■□□□□ 0.14
SMPD1-210ENST00000534405 TRAV24A0A0B4J272 114 aa15.9■□□□□ 0.14
SMPD1-210ENST00000534405 M0R296 226 aa15.9■□□□□ 0.14
SMPD1-210ENST00000534405 KIR2DS1A0A191URI9 304 aa15.9■□□□□ 0.14
SMPD1-210ENST00000534405 C9JCJ5 164 aa15.9■□□□□ 0.14
SMPD1-210ENST00000534405 MT-CO2P00403 227 aa15.9■□□□□ 0.14
SMPD1-210ENST00000534405 AMY1AP04745 511 aa15.9■□□□□ 0.14
SMPD1-210ENST00000534405 KIR2DS4P43632 304 aa15.9■□□□□ 0.14
SMPD1-210ENST00000534405 PLGLB1Q02325 96 aa15.9■□□□□ 0.14
SMPD1-210ENST00000534405 KIR2DS1Q14954 304 aa15.9■□□□□ 0.14
SMPD1-210ENST00000534405 SPATA12Q7Z6I5 190 aa15.9■□□□□ 0.14
SMPD1-210ENST00000534405 C18orf32Q8TCD1 76 aa15.9■□□□□ 0.14
SMPD1-210ENST00000534405 CHRDL1Q9BU40 450 aa15.9■□□□□ 0.14
SMPD1-210ENST00000534405 C12orf49Q9H741 205 aa15.9■□□□□ 0.14
SMPD1-210ENST00000534405 PLSCR4Q9NRQ2 329 aa15.9■□□□□ 0.14
SMPD1-210ENST00000534405 LRP5LA4QPB2 252 aa15.89■□□□□ 0.13
SMPD1-210ENST00000534405 RHBDL1O75783 438 aa15.89■□□□□ 0.13
SMPD1-210ENST00000534405 TNXAQ16473 311 aa15.89■□□□□ 0.13
SMPD1-210ENST00000534405 VWC2Q2TAL6 325 aa15.89■□□□□ 0.13
SMPD1-210ENST00000534405 BHLHA15Q7RTS1 189 aaPredicted RBP15.89■□□□□ 0.13
SMPD1-210ENST00000534405 NPVFQ9HCQ7 196 aa15.89■□□□□ 0.13
SMPD1-210ENST00000534405 C1RLQ9NZP8 487 aa15.89■□□□□ 0.13
SMPD1-210ENST00000534405 ERRFI1Q9UJM3 462 aaPredicted RBP15.89■□□□□ 0.13
SMPD1-210ENST00000534405 URB1O60287 2271 aaKnown RBP15.89■□□□□ 0.13
SMPD1-210ENST00000534405 MED12LQ86YW9 2145 aa15.89■□□□□ 0.13
SMPD1-210ENST00000534405 C7orf71A4D174 169 aa15.89■□□□□ 0.13
SMPD1-210ENST00000534405 PMS2P5A8MQ11 134 aa15.89■□□□□ 0.13
SMPD1-210ENST00000534405 CLDN1O95832 211 aa15.89■□□□□ 0.13
SMPD1-210ENST00000534405 HAND1O96004 215 aa15.89■□□□□ 0.13
SMPD1-210ENST00000534405 AZU1P20160 251 aa15.89■□□□□ 0.13
SMPD1-210ENST00000534405 REG1BP48304 166 aa15.89■□□□□ 0.13
SMPD1-210ENST00000534405 TGFBR3Q03167 851 aa15.89■□□□□ 0.13
SMPD1-210ENST00000534405 OR10W1Q8NGF6 305 aa15.89■□□□□ 0.13
SMPD1-210ENST00000534405 M0R2Z0 102 aa15.88■□□□□ 0.13
SMPD1-210ENST00000534405 OR10J4P0C629 311 aa15.88■□□□□ 0.13
SMPD1-210ENST00000534405 CRYBB3P26998 211 aa15.88■□□□□ 0.13
SMPD1-210ENST00000534405 HIST1H1AQ02539 215 aaPredicted RBP15.88■□□□□ 0.13
SMPD1-210ENST00000534405 TMEM95Q3KNT9 176 aa15.88■□□□□ 0.13
SMPD1-210ENST00000534405 SPATA46Q5T0L3 261 aa15.88■□□□□ 0.13
SMPD1-210ENST00000534405 FAM231BA6NCW3 169 aa15.88■□□□□ 0.13
SMPD1-210ENST00000534405 HSBP1O75506 76 aa15.88■□□□□ 0.13
SMPD1-210ENST00000534405 ZNF883P0CG24 379 aa15.88■□□□□ 0.13
SMPD1-210ENST00000534405 CD1BP29016 333 aa15.88■□□□□ 0.13
SMPD1-210ENST00000534405 ZC2HC1AQ96GY0 325 aa15.88■□□□□ 0.13
SMPD1-210ENST00000534405 EAF1Q96JC9 268 aaPredicted RBP15.88■□□□□ 0.13
SMPD1-210ENST00000534405 ZNF48Q96MX3 618 aaPredicted RBP15.88■□□□□ 0.13
SMPD1-210ENST00000534405 OR4C46A6NHA9 309 aa15.87■□□□□ 0.13
SMPD1-210ENST00000534405 CA6P23280 308 aa15.87■□□□□ 0.13
SMPD1-210ENST00000534405 MEOX1P50221 254 aa15.87■□□□□ 0.13
SMPD1-210ENST00000534405 PLP2Q04941 152 aa15.87■□□□□ 0.13
SMPD1-210ENST00000534405 MRPL54Q6P161 138 aaKnown RBP15.87■□□□□ 0.13
SMPD1-210ENST00000534405 CRXO43186 299 aaPredicted RBP15.87■□□□□ 0.13
SMPD1-210ENST00000534405 APCSP02743 223 aa15.87■□□□□ 0.13
SMPD1-210ENST00000534405 TMEM70Q9BUB7 260 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms