RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 COMMD5Q9GZQ3 224 aa13.34□□□□□ -0.27
UBXN1-216ENST00000533908 RNF167Q9H6Y7 350 aa13.34□□□□□ -0.27
UBXN1-216ENST00000533908 TMEM140Q9NV12 185 aa13.34□□□□□ -0.27
UBXN1-216ENST00000533908 BLOC1S6Q9UL45 172 aa13.34□□□□□ -0.27
UBXN1-216ENST00000533908 IGHV3-21A0A0B4J1V1 117 aa13.33□□□□□ -0.28
UBXN1-216ENST00000533908 SERPINE2P07093 398 aa13.33□□□□□ -0.28
UBXN1-216ENST00000533908 OR13C7P0DN81 318 aa13.33□□□□□ -0.28
UBXN1-216ENST00000533908 NQO2P16083 231 aa13.33□□□□□ -0.28
UBXN1-216ENST00000533908 RPL35AP18077 110 aaKnown RBP13.33□□□□□ -0.28
UBXN1-216ENST00000533908 SDC2P34741 201 aa13.33□□□□□ -0.28
UBXN1-216ENST00000533908 ADMP35318 185 aa13.33□□□□□ -0.28
UBXN1-216ENST00000533908 APOC4P55056 127 aa13.33□□□□□ -0.28
UBXN1-216ENST00000533908 FXYD4P59646 89 aa13.33□□□□□ -0.28
UBXN1-216ENST00000533908 SLC25A24Q6NUK1 477 aa13.33□□□□□ -0.28
UBXN1-216ENST00000533908 OR51H1Q8NH63 302 aa13.33□□□□□ -0.28
UBXN1-216ENST00000533908 QTRT1Q9BXR0 403 aaKnown RBP13.33□□□□□ -0.28
UBXN1-216ENST00000533908 PLEKHA2Q9HB19 425 aa13.33□□□□□ -0.28
UBXN1-216ENST00000533908 UBE2CO00762 179 aa13.32□□□□□ -0.28
UBXN1-216ENST00000533908 ZNF207O43670 478 aaKnown RBP13.32□□□□□ -0.28
UBXN1-216ENST00000533908 PSMB9P28065 219 aa13.32□□□□□ -0.28
UBXN1-216ENST00000533908 MXD1Q05195 221 aa13.32□□□□□ -0.28
UBXN1-216ENST00000533908 GDPD1Q8N9F7 314 aa13.32□□□□□ -0.28
UBXN1-216ENST00000533908 GIMAP1Q8WWP7 306 aa13.32□□□□□ -0.28
UBXN1-216ENST00000533908 THYN1Q9P016 225 aa13.32□□□□□ -0.28
UBXN1-216ENST00000533908 KIR2DL5BA0A0G2JN68 375 aa13.31□□□□□ -0.28
UBXN1-216ENST00000533908 KIR2DL5BA0A0G2JPC4 375 aa13.31□□□□□ -0.28
UBXN1-216ENST00000533908 TRAPPC2P0DI81 140 aa13.31□□□□□ -0.28
UBXN1-216ENST00000533908 TRAPPC2BP0DI82 140 aa13.31□□□□□ -0.28
UBXN1-216ENST00000533908 ATF4P18848 351 aaPredicted RBP13.31□□□□□ -0.28
UBXN1-216ENST00000533908 GNRHRP30968 328 aa13.31□□□□□ -0.28
UBXN1-216ENST00000533908 CATR1Q13166 79 aa13.31□□□□□ -0.28
UBXN1-216ENST00000533908 ZNF124Q15973 351 aa13.31□□□□□ -0.28
UBXN1-216ENST00000533908 KIR2DL5AQ8N109 375 aa13.31□□□□□ -0.28
UBXN1-216ENST00000533908 DMBX1Q8NFW5 382 aa13.31□□□□□ -0.28
UBXN1-216ENST00000533908 KIR2DL5BQ8NHK3 375 aa13.31□□□□□ -0.28
UBXN1-216ENST00000533908 SCARB1Q8WTV0 552 aa13.31□□□□□ -0.28
UBXN1-216ENST00000533908 AUNIPQ9H7T9 357 aa13.31□□□□□ -0.28
UBXN1-216ENST00000533908 MAP6D1Q9H9H5 199 aa13.31□□□□□ -0.28
UBXN1-216ENST00000533908 DAZ1Q9NQZ3 744 aaKnown RBP13.31□□□□□ -0.28
UBXN1-216ENST00000533908 DNAH10Q8IVF4 4471 aa13.3□□□□□ -0.28
UBXN1-216ENST00000533908 MRPS14O60783 128 aaKnown RBP13.3□□□□□ -0.28
UBXN1-216ENST00000533908 DEDDO75618 318 aa13.3□□□□□ -0.28
UBXN1-216ENST00000533908 CTSDP07339 412 aaPredicted RBP13.3□□□□□ -0.28
UBXN1-216ENST00000533908 FGF2P09038 288 aa13.3□□□□□ -0.28
UBXN1-216ENST00000533908 FCGR2BP31994 310 aaPredicted RBP13.3□□□□□ -0.28
UBXN1-216ENST00000533908 GABARAPL2P60520 117 aa13.3□□□□□ -0.28
UBXN1-216ENST00000533908 TMEM17Q86X19 198 aa13.3□□□□□ -0.28
UBXN1-216ENST00000533908 APRG1Q8IVJ8 170 aa13.3□□□□□ -0.28
UBXN1-216ENST00000533908 STPG3Q8N7X2 389 aa13.3□□□□□ -0.28
UBXN1-216ENST00000533908 OR5B3Q8NH48 314 aa13.3□□□□□ -0.28
UBXN1-216ENST00000533908 BSCL2Q96G97 398 aaPredicted RBP13.3□□□□□ -0.28
UBXN1-216ENST00000533908 C20orf24Q9BUV8 137 aa13.3□□□□□ -0.28
UBXN1-216ENST00000533908 NDUFA4L2Q9NRX3 87 aa13.3□□□□□ -0.28
UBXN1-216ENST00000533908 SSR3Q9UNL2 185 aa13.3□□□□□ -0.28
UBXN1-216ENST00000533908 NSG2Q9Y328 171 aa13.3□□□□□ -0.28
UBXN1-216ENST00000533908 MEIS3P1A6NDR6 274 aa13.29□□□□□ -0.28
UBXN1-216ENST00000533908 K7EIM0 57 aa13.29□□□□□ -0.28
UBXN1-216ENST00000533908 K7EMT4 169 aa13.29□□□□□ -0.28
UBXN1-216ENST00000533908 NDUFA4O00483 81 aa13.29□□□□□ -0.28
UBXN1-216ENST00000533908 HSPA13P48723 471 aa13.29□□□□□ -0.28
UBXN1-216ENST00000533908 IDNKQ5T6J7 187 aa13.29□□□□□ -0.28
UBXN1-216ENST00000533908 AADACL3Q5VUY0 350 aa13.29□□□□□ -0.28
UBXN1-216ENST00000533908 LAMTOR1Q6IAA8 161 aa13.29□□□□□ -0.28
UBXN1-216ENST00000533908 OR5AP2Q8NGF4 316 aa13.29□□□□□ -0.28
UBXN1-216ENST00000533908 OR1L8Q8NGR8 309 aa13.29□□□□□ -0.28
UBXN1-216ENST00000533908 C21orf62Q9NYP8 219 aa13.29□□□□□ -0.28
UBXN1-216ENST00000533908 SMPXQ9UHP9 88 aa13.29□□□□□ -0.28
UBXN1-216ENST00000533908 KLK5Q9Y337 293 aaPredicted RBP13.29□□□□□ -0.28
UBXN1-216ENST00000533908 F11RQ9Y624 299 aaKnown RBP13.29□□□□□ -0.28
UBXN1-216ENST00000533908 KMT2AQ03164 3969 aa13.29□□□□□ -0.28
UBXN1-216ENST00000533908 PGLYRP1O75594 196 aaPredicted RBP13.28□□□□□ -0.28
UBXN1-216ENST00000533908 CTSGP08311 255 aa13.28□□□□□ -0.28
UBXN1-216ENST00000533908 SPSB3Q6PJ21 355 aa13.28□□□□□ -0.28
UBXN1-216ENST00000533908 CD300LFQ8TDQ1 290 aa13.28□□□□□ -0.28
UBXN1-216ENST00000533908 PHLDA1Q8WV24 401 aaPredicted RBP13.28□□□□□ -0.28
UBXN1-216ENST00000533908 RNF2Q99496 336 aa13.28□□□□□ -0.28
UBXN1-216ENST00000533908 HINT2Q9BX68 163 aa13.28□□□□□ -0.28
UBXN1-216ENST00000533908 VCX3BQ9H321 246 aa13.28□□□□□ -0.28
UBXN1-216ENST00000533908 COMMD9Q9P000 198 aa13.28□□□□□ -0.28
UBXN1-216ENST00000533908 RAB26Q9ULW5 256 aa13.28□□□□□ -0.28
UBXN1-216ENST00000533908 ETV7Q9Y603 341 aa13.28□□□□□ -0.28
UBXN1-216ENST00000533908 OR4C46A6NHA9 309 aa13.27□□□□□ -0.29
UBXN1-216ENST00000533908 DBX1A6NMT0 343 aa13.27□□□□□ -0.29
UBXN1-216ENST00000533908 KRASP01116 189 aa13.27□□□□□ -0.29
UBXN1-216ENST00000533908 LPAR6P43657 344 aa13.27□□□□□ -0.29
UBXN1-216ENST00000533908 SCAND1P57086 179 aa13.27□□□□□ -0.29
UBXN1-216ENST00000533908 THOC7Q6I9Y2 204 aaKnown RBP13.27□□□□□ -0.29
UBXN1-216ENST00000533908 DHRS11Q6UWP2 260 aa13.27□□□□□ -0.29
UBXN1-216ENST00000533908 FCAMRQ8WWV6 532 aa13.27□□□□□ -0.29
UBXN1-216ENST00000533908 GALNT14Q96FL9 552 aa13.27□□□□□ -0.29
UBXN1-216ENST00000533908 IGHV3-49A0A0A0MS15 119 aa13.26□□□□□ -0.29
UBXN1-216ENST00000533908 A0A0A6YYH2 397 aa13.26□□□□□ -0.29
UBXN1-216ENST00000533908 A6NJ64 397 aa13.26□□□□□ -0.29
UBXN1-216ENST00000533908 MARCH11A6NNE9 402 aa13.26□□□□□ -0.29
UBXN1-216ENST00000533908 RLN1P04808 185 aa13.26□□□□□ -0.29
UBXN1-216ENST00000533908 F2RP25116 425 aa13.26□□□□□ -0.29
UBXN1-216ENST00000533908 G6PCP35575 357 aa13.26□□□□□ -0.29
UBXN1-216ENST00000533908 RFX2P48378 723 aa13.26□□□□□ -0.29
UBXN1-216ENST00000533908 HSD17B13Q7Z5P4 300 aaPredicted RBP13.26□□□□□ -0.29
UBXN1-216ENST00000533908 UBAC2Q8NBM4 344 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms