RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 GPR183P32249 361 aa7.91□□□□□ -1.14
CAPN1-225ENST00000533704 CD81P60033 236 aa7.91□□□□□ -1.14
CAPN1-225ENST00000533704 CTF1Q16619 201 aa7.91□□□□□ -1.14
CAPN1-225ENST00000533704 CNPY1Q3B7I2 92 aa7.91□□□□□ -1.14
CAPN1-225ENST00000533704 FAM106AQ4KMX7 169 aa7.91□□□□□ -1.14
CAPN1-225ENST00000533704 SLC25A24Q6NUK1 477 aa7.91□□□□□ -1.14
CAPN1-225ENST00000533704 LPCAT3Q6P1A2 487 aa7.91□□□□□ -1.14
CAPN1-225ENST00000533704 TBC1D26Q86UD7 250 aa7.91□□□□□ -1.14
CAPN1-225ENST00000533704 CXorf58Q96LI9 332 aa7.91□□□□□ -1.14
CAPN1-225ENST00000533704 PLEKHA3Q9HB20 300 aa7.91□□□□□ -1.14
CAPN1-225ENST00000533704 SIGLEC8Q9NYZ4 499 aa7.91□□□□□ -1.14
CAPN1-225ENST00000533704 DMRT1Q9Y5R6 373 aa7.91□□□□□ -1.14
CAPN1-225ENST00000533704 TRBV7-1A0A0A6YYK4 115 aa7.9□□□□□ -1.14
CAPN1-225ENST00000533704 ZNF182P17025 639 aaPredicted RBP7.9□□□□□ -1.14
CAPN1-225ENST00000533704 DEFB114Q30KQ6 69 aa7.9□□□□□ -1.14
CAPN1-225ENST00000533704 ZNF585BQ52M93 769 aa7.9□□□□□ -1.14
CAPN1-225ENST00000533704 THOC7Q6I9Y2 204 aaKnown RBP7.9□□□□□ -1.14
CAPN1-225ENST00000533704 PLET1Q6UQ28 207 aa7.9□□□□□ -1.14
CAPN1-225ENST00000533704 GPR141Q7Z602 305 aa7.9□□□□□ -1.14
CAPN1-225ENST00000533704 GPHB5Q86YW7 130 aa7.9□□□□□ -1.14
CAPN1-225ENST00000533704 SLC38A6Q8IZM9 456 aa7.9□□□□□ -1.14
CAPN1-225ENST00000533704 GDPD1Q8N9F7 314 aa7.9□□□□□ -1.14
CAPN1-225ENST00000533704 OR2K2Q8NGT1 345 aa7.9□□□□□ -1.14
CAPN1-225ENST00000533704 OR52I2Q8NH67 350 aa7.9□□□□□ -1.14
CAPN1-225ENST00000533704 WDR89Q96FK6 387 aaPredicted RBP7.9□□□□□ -1.14
CAPN1-225ENST00000533704 NEURL2Q9BR09 285 aa7.9□□□□□ -1.14
CAPN1-225ENST00000533704 SRSF8Q9BRL6 282 aaKnown RBP7.9□□□□□ -1.14
CAPN1-225ENST00000533704 MRPS26Q9BYN8 205 aaKnown RBP7.9□□□□□ -1.14
CAPN1-225ENST00000533704 C19orf73Q9NVV2 129 aa7.9□□□□□ -1.14
CAPN1-225ENST00000533704 SLC2A8Q9NY64 477 aa7.9□□□□□ -1.14
CAPN1-225ENST00000533704 PTTG2Q9NZH5 202 aa7.9□□□□□ -1.14
CAPN1-225ENST00000533704 THYN1Q9P016 225 aa7.9□□□□□ -1.14
CAPN1-225ENST00000533704 LGALS9O00182 355 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 RGS5O15539 181 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 TPPPO94811 219 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 SERPINE2P07093 398 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 CD7P09564 240 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 PI3P19957 117 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 CBLN1P23435 193 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 PPP5CP53041 499 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 WT1-ASQ06250 92 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 TM4SF20Q53R12 229 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 RNASE10Q5GAN6 216 aaKnown RBP7.89□□□□□ -1.15
CAPN1-225ENST00000533704 H2BFWTQ7Z2G1 175 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 UBAC2Q8NBM4 344 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 UXS1Q8NBZ7 420 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 OR4A16Q8NH70 328 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 ZNF502Q8TBZ5 544 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 LSM10Q969L4 123 aaKnown RBP7.89□□□□□ -1.15
CAPN1-225ENST00000533704 TM2D3Q9BRN9 247 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 THAP7Q9BT49 309 aaPredicted RBP7.89□□□□□ -1.15
CAPN1-225ENST00000533704 WFDC10AQ9H1F0 79 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 TECRQ9NZ01 308 aaKnown RBP7.89□□□□□ -1.15
CAPN1-225ENST00000533704 KLK11Q9UBX7 282 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 PRNDQ9UKY0 176 aa7.89□□□□□ -1.15
CAPN1-225ENST00000533704 HUWE1Q7Z6Z7 4374 aaKnown RBP7.89□□□□□ -1.15
CAPN1-225ENST00000533704 TMEM213A2RRL7 107 aa7.88□□□□□ -1.15
CAPN1-225ENST00000533704 OR2T8A6NH00 312 aa7.88□□□□□ -1.15
CAPN1-225ENST00000533704 DBX1A6NMT0 343 aa7.88□□□□□ -1.15
CAPN1-225ENST00000533704 ZNF785A8K8V0 405 aa7.88□□□□□ -1.15
CAPN1-225ENST00000533704 A8MZ25 164 aa7.88□□□□□ -1.15
CAPN1-225ENST00000533704 SCAF4O95104 1147 aaKnown RBP7.88□□□□□ -1.15
CAPN1-225ENST00000533704 CD3DP04234 171 aa7.88□□□□□ -1.15
CAPN1-225ENST00000533704 PTBP1P26599 531 aaKnown RBP eCLIP7.88□□□□□ -1.15
CAPN1-225ENST00000533704 MFAP2P55001 183 aa7.88□□□□□ -1.15
CAPN1-225ENST00000533704 HAGHQ16775 308 aa7.88□□□□□ -1.15
CAPN1-225ENST00000533704 ZNF57Q68EA5 555 aaPredicted RBP7.88□□□□□ -1.15
CAPN1-225ENST00000533704 BTNL8Q6UX41 500 aa7.88□□□□□ -1.15
CAPN1-225ENST00000533704 UNQ9165/PRO28630Q6UXU0 137 aa7.88□□□□□ -1.15
CAPN1-225ENST00000533704 HSD17B13Q7Z5P4 300 aaPredicted RBP7.88□□□□□ -1.15
CAPN1-225ENST00000533704 CLVS1Q8IUQ0 354 aaPredicted RBP7.88□□□□□ -1.15
CAPN1-225ENST00000533704 DEFB125Q8N687 156 aa7.88□□□□□ -1.15
CAPN1-225ENST00000533704 MUC7Q8TAX7 377 aa7.88□□□□□ -1.15
CAPN1-225ENST00000533704 MRGPRFQ96AM1 343 aa7.88□□□□□ -1.15
CAPN1-225ENST00000533704 TMEM56Q96MV1 263 aa7.88□□□□□ -1.15
CAPN1-225ENST00000533704 SPATA25Q9BR10 227 aa7.88□□□□□ -1.15
CAPN1-225ENST00000533704 PALMDQ9NP74 551 aa7.88□□□□□ -1.15
CAPN1-225ENST00000533704 NDUFA4L2Q9NRX3 87 aa7.88□□□□□ -1.15
CAPN1-225ENST00000533704 F11RQ9Y624 299 aaKnown RBP7.88□□□□□ -1.15
CAPN1-225ENST00000533704 C15orf61A6NNL5 157 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 OR11H12B2RN74 326 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 C3orf84H3BNL1 204 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 TGOLN2O43493 480 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 PFDN1O60925 122 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 FGF2P09038 288 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 UCP3P55916 312 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 SPCS2Q15005 226 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 KLK9Q2XQG4 91 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 SCGB2B2Q4G0G5 96 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 Q56UQ5 140 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 SPINK9Q5DT21 86 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 LAX1Q8IWV1 398 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 TMEM61Q8N0U2 210 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 OR5B3Q8NH48 314 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 VN1R17PQ8TDU5 208 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 MISP3Q96FF7 219 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 ABHD1Q96SE0 405 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 MIXL1Q9H2W2 232 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 RETNQ9HD89 108 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 FKBP11Q9NYL4 201 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms