RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 GHRLQ9UBU3 117 aa4.49□□□□□ -1.69
SOX6-216ENST00000533658 CEPT1Q9Y6K0 416 aa4.49□□□□□ -1.69
SOX6-216ENST00000533658 ABCA13Q86UQ4 5058 aa4.49□□□□□ -1.69
SOX6-216ENST00000533658 SORL1Q92673 2214 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 TRBV6-6A0A0A6YYG2 114 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 IGKV1D-13A0A0B4J2D9 117 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 LINC00854A0A1B0GVQ3 168 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 A0A1B0GW64 132 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 XKRY2A2RUG3 117 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 E7EUB6 86 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 BMPR1BO00238 502 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 BRI3O95415 125 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 APOA2P02652 100 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 REG1AP05451 166 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 IGKV1-13P0DP09 117 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 NFYAP23511 347 aaPredicted RBP4.48□□□□□ -1.69
SOX6-216ENST00000533658 RHOGP84095 191 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 TPBGQ13641 420 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 KLF5Q13887 457 aaPredicted RBP4.48□□□□□ -1.69
SOX6-216ENST00000533658 RBMS2Q15434 407 aaKnown RBP4.48□□□□□ -1.69
SOX6-216ENST00000533658 TNXAQ16473 311 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 LY6G6FQ5SQ64 297 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 FAM71F2Q6NXP2 309 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 MOB1BQ7L9L4 216 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 MS4A15Q8N5U1 240 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 TMEM170AQ8WVE7 144 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 NUDCD2Q8WVJ2 157 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 ACOT12Q8WYK0 555 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 PTX4Q96A99 478 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 RAB3CQ96E17 227 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 CNBD2Q96M20 576 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 TSNAXQ99598 290 aaKnown RBP4.48□□□□□ -1.69
SOX6-216ENST00000533658 URM1Q9BTM9 101 aaKnown RBP4.48□□□□□ -1.69
SOX6-216ENST00000533658 ST6GALNAC5Q9BVH7 336 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 RNF167Q9H6Y7 350 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 ZNF430Q9H8G1 570 aaPredicted RBP4.48□□□□□ -1.69
SOX6-216ENST00000533658 STUB1Q9UNE7 303 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 RBM7Q9Y580 266 aaKnown RBP4.48□□□□□ -1.69
SOX6-216ENST00000533658 V9GY05 133 aa4.48□□□□□ -1.69
SOX6-216ENST00000533658 KMT2AQ03164 3969 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 TRBV6-7A0A0A0MS04 114 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 IGHV3-35A0A0C4DH35 117 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 RBMY1BA6NDE4 496 aaKnown RBP4.47□□□□□ -1.69
SOX6-216ENST00000533658 RBMY1EA6NEQ0 496 aaKnown RBP4.47□□□□□ -1.69
SOX6-216ENST00000533658 L7N2F9 121 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 MFNGO00587 321 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 CTDSPLO15194 276 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 TNFSF12O43508 249 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 FCGR3BO75015 233 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 RBBP9O75884 186 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 OR2J3O76001 311 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 MBPP02686 304 aaPredicted RBP4.47□□□□□ -1.69
SOX6-216ENST00000533658 RBMY1DP0C7P1 496 aaKnown RBP4.47□□□□□ -1.69
SOX6-216ENST00000533658 SAA1P0DJI8 122 aaPredicted RBP4.47□□□□□ -1.69
SOX6-216ENST00000533658 RPA2P15927 270 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 HIST1H1DP16402 221 aaKnown RBP4.47□□□□□ -1.69
SOX6-216ENST00000533658 CRHBPP24387 322 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 CD81P60033 236 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 EXOSC2Q13868 293 aaKnown RBP4.47□□□□□ -1.69
SOX6-216ENST00000533658 TWIST1Q15672 202 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 PRSS8Q16651 343 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 RPEL1Q2QD12 228 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 C10orf25Q5T742 122 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 C22orf42Q6IC83 251 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 PYHIN1Q6K0P9 492 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 ZNF343Q6P1L6 599 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 SSX9Q7RTT3 188 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 PDPNQ86YL7 162 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 ADAD2Q8NCV1 583 aaKnown RBP4.47□□□□□ -1.69
SOX6-216ENST00000533658 OR56B1Q8NGI3 324 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 OR4A4PQ8NGN8 299 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 OR10R2Q8NGX6 335 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 OR10J5Q8NHC4 309 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 SRSF12Q8WXF0 261 aaKnown RBP4.47□□□□□ -1.69
SOX6-216ENST00000533658 MGLLQ99685 303 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 GINS4Q9BRT9 223 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 DCUN1D5Q9BTE7 237 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 CABLES2Q9BTV7 478 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 ATG5Q9H1Y0 275 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 DUSP21Q9H596 190 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 TUBA4BQ9H853 241 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 SCN3BQ9NY72 215 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 PEF1Q9UBV8 284 aaKnown RBP4.47□□□□□ -1.69
SOX6-216ENST00000533658 UBQLN2Q9UHD9 624 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 LRRC42Q9Y546 428 aa4.47□□□□□ -1.69
SOX6-216ENST00000533658 TRAV3A0A0B4J244 114 aa4.46□□□□□ -1.7
SOX6-216ENST00000533658 TMEM235A6NFC5 223 aa4.46□□□□□ -1.7
SOX6-216ENST00000533658 ITGB1BP1O14713 200 aa4.46□□□□□ -1.7
SOX6-216ENST00000533658 NDUFB8O95169 186 aa4.46□□□□□ -1.7
SOX6-216ENST00000533658 CD40LGP29965 261 aa4.46□□□□□ -1.7
SOX6-216ENST00000533658 DUTP33316 252 aaKnown RBP4.46□□□□□ -1.7
SOX6-216ENST00000533658 TAGLN2P37802 199 aaKnown RBP4.46□□□□□ -1.7
SOX6-216ENST00000533658 LGALS7P47929 136 aa4.46□□□□□ -1.7
SOX6-216ENST00000533658 BRWD1-AS2P59051 145 aa4.46□□□□□ -1.7
SOX6-216ENST00000533658 MRPS15P82914 257 aaKnown RBP4.46□□□□□ -1.7
SOX6-216ENST00000533658 EWSR1Q01844 656 aaKnown RBP eCLIP4.46□□□□□ -1.7
SOX6-216ENST00000533658 MLLT11Q13015 90 aaPredicted RBP4.46□□□□□ -1.7
SOX6-216ENST00000533658 ARFRP1Q13795 201 aa4.46□□□□□ -1.7
SOX6-216ENST00000533658 GUCA2BQ16661 112 aa4.46□□□□□ -1.7
SOX6-216ENST00000533658 CDNFQ49AH0 187 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms