RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 IFNA6P05013 189 aa11.67□□□□□ -0.54
CPSF1-211ENST00000533492 OR13C7P0DN81 318 aa11.67□□□□□ -0.54
CPSF1-211ENST00000533492 RORCP51449 518 aa11.67□□□□□ -0.54
CPSF1-211ENST00000533492 PHLDA2Q53GA4 152 aa11.67□□□□□ -0.54
CPSF1-211ENST00000533492 CASC10Q5T4H9 136 aa11.67□□□□□ -0.54
CPSF1-211ENST00000533492 SLC25A24Q6NUK1 477 aa11.67□□□□□ -0.54
CPSF1-211ENST00000533492 HSD17B13Q7Z5P4 300 aaPredicted RBP11.67□□□□□ -0.54
CPSF1-211ENST00000533492 PLEKHA3Q9HB20 300 aa11.67□□□□□ -0.54
CPSF1-211ENST00000533492 ZC4H2Q9NQZ6 224 aa11.67□□□□□ -0.54
CPSF1-211ENST00000533492 HUWE1Q7Z6Z7 4374 aaKnown RBP11.67□□□□□ -0.54
CPSF1-211ENST00000533492 FAM25AB3EWG3 89 aa11.66□□□□□ -0.54
CPSF1-211ENST00000533492 FAM25CB3EWG5 89 aa11.66□□□□□ -0.54
CPSF1-211ENST00000533492 FAM25GB3EWG6 89 aa11.66□□□□□ -0.54
CPSF1-211ENST00000533492 HPGDSO60760 199 aa11.66□□□□□ -0.54
CPSF1-211ENST00000533492 SERPINE2P07093 398 aa11.66□□□□□ -0.54
CPSF1-211ENST00000533492 ELK1P19419 428 aa11.66□□□□□ -0.54
CPSF1-211ENST00000533492 EDN2P20800 178 aa11.66□□□□□ -0.54
CPSF1-211ENST00000533492 PTBP1P26599 531 aaKnown RBP eCLIP11.66□□□□□ -0.54
CPSF1-211ENST00000533492 GPR183P32249 361 aa11.66□□□□□ -0.54
CPSF1-211ENST00000533492 G6PCP35575 357 aa11.66□□□□□ -0.54
CPSF1-211ENST00000533492 ZNF57Q68EA5 555 aaPredicted RBP11.66□□□□□ -0.54
CPSF1-211ENST00000533492 MZT2AQ6P582 158 aa11.66□□□□□ -0.54
CPSF1-211ENST00000533492 PLET1Q6UQ28 207 aa11.66□□□□□ -0.54
CPSF1-211ENST00000533492 GDPD1Q8N9F7 314 aa11.66□□□□□ -0.54
CPSF1-211ENST00000533492 UXS1Q8NBZ7 420 aa11.66□□□□□ -0.54
CPSF1-211ENST00000533492 CACNG8Q8WXS5 425 aa11.66□□□□□ -0.54
CPSF1-211ENST00000533492 ISOC1Q96CN7 298 aa11.66□□□□□ -0.54
CPSF1-211ENST00000533492 FXYD6Q9H0Q3 95 aa11.66□□□□□ -0.54
CPSF1-211ENST00000533492 NSG2Q9Y328 171 aa11.66□□□□□ -0.54
CPSF1-211ENST00000533492 OR51B2Q9Y5P1 312 aa11.66□□□□□ -0.54
CPSF1-211ENST00000533492 OR11H12B2RN74 326 aa11.65□□□□□ -0.54
CPSF1-211ENST00000533492 CD7P09564 240 aa11.65□□□□□ -0.54
CPSF1-211ENST00000533492 RCVRNP35243 200 aa11.65□□□□□ -0.54
CPSF1-211ENST00000533492 ZNF585BQ52M93 769 aa11.65□□□□□ -0.54
CPSF1-211ENST00000533492 ZNF502Q8TBZ5 544 aa11.65□□□□□ -0.54
CPSF1-211ENST00000533492 VN1R17PQ8TDU5 208 aa11.65□□□□□ -0.54
CPSF1-211ENST00000533492 LSM10Q969L4 123 aaKnown RBP11.65□□□□□ -0.54
CPSF1-211ENST00000533492 WDR89Q96FK6 387 aaPredicted RBP11.65□□□□□ -0.54
CPSF1-211ENST00000533492 FKBP11Q9NYL4 201 aa11.65□□□□□ -0.54
CPSF1-211ENST00000533492 SELENOKQ9Y6D0 94 aa11.65□□□□□ -0.54
CPSF1-211ENST00000533492 CEPT1Q9Y6K0 416 aa11.65□□□□□ -0.54
CPSF1-211ENST00000533492 IGHV3-35A0A0C4DH35 117 aa11.64□□□□□ -0.55
CPSF1-211ENST00000533492 TMEM213A2RRL7 107 aa11.64□□□□□ -0.55
CPSF1-211ENST00000533492 A8MWP6 167 aa11.64□□□□□ -0.55
CPSF1-211ENST00000533492 WT1-ASQ06250 92 aa11.64□□□□□ -0.55
CPSF1-211ENST00000533492 TM4SF20Q53R12 229 aa11.64□□□□□ -0.55
CPSF1-211ENST00000533492 SLC16A13Q7RTY0 426 aa11.64□□□□□ -0.55
CPSF1-211ENST00000533492 CADM3Q8N126 398 aa11.64□□□□□ -0.55
CPSF1-211ENST00000533492 DEFB125Q8N687 156 aa11.64□□□□□ -0.55
CPSF1-211ENST00000533492 AP3S1Q92572 193 aa11.64□□□□□ -0.55
CPSF1-211ENST00000533492 MARC2Q969Z3 335 aa11.64□□□□□ -0.55
CPSF1-211ENST00000533492 TMEM56Q96MV1 263 aa11.64□□□□□ -0.55
CPSF1-211ENST00000533492 TSC22D3Q99576 134 aa11.64□□□□□ -0.55
CPSF1-211ENST00000533492 NDUFA4L2Q9NRX3 87 aa11.64□□□□□ -0.55
CPSF1-211ENST00000533492 PRNDQ9UKY0 176 aa11.64□□□□□ -0.55
CPSF1-211ENST00000533492 UNQ9165/PRO28630Q6UXU0 137 aa11.63□□□□□ -0.55
CPSF1-211ENST00000533492 TBC1D26Q86UD7 250 aa11.63□□□□□ -0.55
CPSF1-211ENST00000533492 SLC38A6Q8IZM9 456 aa11.63□□□□□ -0.55
CPSF1-211ENST00000533492 SRD5A3Q9H8P0 318 aa11.63□□□□□ -0.55
CPSF1-211ENST00000533492 FAM212BQ9NTI7 297 aaPredicted RBP11.63□□□□□ -0.55
CPSF1-211ENST00000533492 MRPL27Q9P0M9 148 aaKnown RBP11.63□□□□□ -0.55
CPSF1-211ENST00000533492 MLXQ9UH92 298 aa11.63□□□□□ -0.55
CPSF1-211ENST00000533492 UFC1Q9Y3C8 167 aa11.63□□□□□ -0.55
CPSF1-211ENST00000533492 F11RQ9Y624 299 aaKnown RBP11.63□□□□□ -0.55
CPSF1-211ENST00000533492 TGOLN2O43493 480 aa11.62□□□□□ -0.55
CPSF1-211ENST00000533492 SCAF4O95104 1147 aaKnown RBP11.62□□□□□ -0.55
CPSF1-211ENST00000533492 ELLP55199 621 aaPredicted RBP11.62□□□□□ -0.55
CPSF1-211ENST00000533492 UCP3P55916 312 aa11.62□□□□□ -0.55
CPSF1-211ENST00000533492 ANKRD55Q3KP44 614 aa11.62□□□□□ -0.55
CPSF1-211ENST00000533492 RNASE12Q5GAN4 147 aaKnown RBP11.62□□□□□ -0.55
CPSF1-211ENST00000533492 ZFAND6Q6FIF0 208 aa11.62□□□□□ -0.55
CPSF1-211ENST00000533492 RBPMS2Q6ZRY4 209 aaKnown RBP11.62□□□□□ -0.55
CPSF1-211ENST00000533492 H2BFWTQ7Z2G1 175 aa11.62□□□□□ -0.55
CPSF1-211ENST00000533492 TMEM61Q8N0U2 210 aa11.62□□□□□ -0.55
CPSF1-211ENST00000533492 OR52B4Q8NGK2 314 aa11.62□□□□□ -0.55
CPSF1-211ENST00000533492 OR1L6Q8NGR2 347 aa11.62□□□□□ -0.55
CPSF1-211ENST00000533492 OR5B3Q8NH48 314 aa11.62□□□□□ -0.55
CPSF1-211ENST00000533492 OR4A16Q8NH70 328 aa11.62□□□□□ -0.55
CPSF1-211ENST00000533492 EDA2RQ9HAV5 297 aa11.62□□□□□ -0.55
CPSF1-211ENST00000533492 IGHV3-21A0A0B4J1V1 117 aa11.61□□□□□ -0.55
CPSF1-211ENST00000533492 OR2T8A6NH00 312 aa11.61□□□□□ -0.55
CPSF1-211ENST00000533492 M0QYG6 137 aa11.61□□□□□ -0.55
CPSF1-211ENST00000533492 ZNF182P17025 639 aaPredicted RBP11.61□□□□□ -0.55
CPSF1-211ENST00000533492 SPSB3Q6PJ21 355 aa11.61□□□□□ -0.55
CPSF1-211ENST00000533492 BTNL8Q6UX41 500 aa11.61□□□□□ -0.55
CPSF1-211ENST00000533492 LINC00322Q6ZN03 302 aaPredicted RBP11.61□□□□□ -0.55
CPSF1-211ENST00000533492 UBAC2Q8NBM4 344 aa11.61□□□□□ -0.55
CPSF1-211ENST00000533492 BSCL2Q96G97 398 aaPredicted RBP11.61□□□□□ -0.55
CPSF1-211ENST00000533492 NAA50Q9GZZ1 169 aaKnown RBP11.61□□□□□ -0.55
CPSF1-211ENST00000533492 WFDC10AQ9H1F0 79 aa11.61□□□□□ -0.55
CPSF1-211ENST00000533492 C21orf62Q9NYP8 219 aa11.61□□□□□ -0.55
CPSF1-211ENST00000533492 TRAV25A0A0B4J276 109 aa11.6□□□□□ -0.55
CPSF1-211ENST00000533492 RBMY1BA6NDE4 496 aaKnown RBP11.6□□□□□ -0.55
CPSF1-211ENST00000533492 RBMY1EA6NEQ0 496 aaKnown RBP11.6□□□□□ -0.55
CPSF1-211ENST00000533492 C15orf61A6NNL5 157 aa11.6□□□□□ -0.55
CPSF1-211ENST00000533492 GABARAPO95166 117 aa11.6□□□□□ -0.55
CPSF1-211ENST00000533492 RBMY1DP0C7P1 496 aaKnown RBP11.6□□□□□ -0.55
CPSF1-211ENST00000533492 C8orf88P0DMB2 117 aa11.6□□□□□ -0.55
CPSF1-211ENST00000533492 PGAM2P15259 253 aa11.6□□□□□ -0.55
CPSF1-211ENST00000533492 MFAP2P55001 183 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms