RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CRYBA4P53673 196 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 CLDN18P56856 261 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 LINC00596Q86U02 117 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 FAM89BQ8N5H3 189 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 OR1L8Q8NGR8 309 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 FAM222BQ8WU58 562 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 C1QTNF5Q9BXJ0 243 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 TMEM140Q9NV12 185 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 TLN1Q9Y490 2541 aaKnown RBP10.33□□□□□ -0.76
BDNF-218ENST00000533246 MED13Q9UHV7 2174 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 K7N7A8 449 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 IGHV1-2P23083 117 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 CEACAM3P40198 252 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 PTGDSP41222 190 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 ARF6P62330 175 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 PAX2Q02962 417 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 ZNF645Q8N7E2 425 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 VSTM2AQ8TAG5 236 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 SMIM8Q96KF7 97 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 PRNDQ9UKY0 176 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 IGKV1-27A0A075B6S5 117 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 FAM90A10PA6NDY2 464 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 FAM90A18PA6NE21 464 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 FAM90A16PA6NEW6 464 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 FAM90A20PA6NIJ5 464 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 FAM90A8PA6NJQ4 464 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 FAM90A7PA6NKC0 464 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 FAM90A22PA8MWA6 464 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 FAM90A12PA8MX19 464 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 FAM90A5PA8MXJ8 464 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 FAM90A23PA8MXZ1 464 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 CORTO00230 105 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 SRSF10O75494 262 aaKnown RBP10.33□□□□□ -0.76
BDNF-218ENST00000533246 FAM90A15PP0C7V4 464 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 FAM90A13PP0C7W8 464 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 FAM90A14PP0C7W9 464 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 FAM90A24PP0C7X0 464 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 TDGF1P13385 188 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 BIVMQ86UB2 503 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 OR13A1Q8NGR1 328 aa10.33□□□□□ -0.76
BDNF-218ENST00000533246 PEF1Q9UBV8 284 aaKnown RBP10.33□□□□□ -0.76
BDNF-218ENST00000533246 POLR3KQ9Y2Y1 108 aaPredicted RBP10.33□□□□□ -0.76
BDNF-218ENST00000533246 SNURFLB1AK76 121 aa10.32□□□□□ -0.76
BDNF-218ENST00000533246 CD55P08174 381 aa10.32□□□□□ -0.76
BDNF-218ENST00000533246 ZNF137PP52743 207 aa10.32□□□□□ -0.76
BDNF-218ENST00000533246 STPG4Q8N801 248 aa10.32□□□□□ -0.76
BDNF-218ENST00000533246 C9orf106Q8NAJ2 232 aa10.32□□□□□ -0.76
BDNF-218ENST00000533246 NHLRC2Q8NBF2 726 aa10.32□□□□□ -0.76
BDNF-218ENST00000533246 PLPPR1Q8TBJ4 325 aa10.32□□□□□ -0.76
BDNF-218ENST00000533246 FAM131CQ96AQ9 280 aa10.32□□□□□ -0.76
BDNF-218ENST00000533246 EAF1Q96JC9 268 aaPredicted RBP10.32□□□□□ -0.76
BDNF-218ENST00000533246 GEMIN7Q9H840 131 aaKnown RBP10.32□□□□□ -0.76
BDNF-218ENST00000533246 SS18L2Q9UHA2 77 aa10.32□□□□□ -0.76
BDNF-218ENST00000533246 E9PLN8 166 aa10.32□□□□□ -0.76
BDNF-218ENST00000533246 ATXN7O15265 892 aaPredicted RBP10.32□□□□□ -0.76
BDNF-218ENST00000533246 SRSF6Q13247 344 aaKnown RBP10.32□□□□□ -0.76
BDNF-218ENST00000533246 C12orf54Q6X4T0 127 aa10.32□□□□□ -0.76
BDNF-218ENST00000533246 PDPNQ86YL7 162 aa10.32□□□□□ -0.76
BDNF-218ENST00000533246 FAM216BQ8N7L0 139 aa10.32□□□□□ -0.76
BDNF-218ENST00000533246 MANBALQ9NQG1 85 aa10.32□□□□□ -0.76
BDNF-218ENST00000533246 SUPT4H1P63272 117 aaKnown RBP10.32□□□□□ -0.76
BDNF-218ENST00000533246 TMEM106BQ9NUM4 274 aa10.32□□□□□ -0.76
BDNF-218ENST00000533246 MYO9AB2RTY4 2548 aa10.32□□□□□ -0.76
BDNF-218ENST00000533246 OR2J3O76001 311 aa10.31□□□□□ -0.76
BDNF-218ENST00000533246 Q0VFX4 171 aa10.31□□□□□ -0.76
BDNF-218ENST00000533246 KIAA1644Q3SXP7 199 aa10.31□□□□□ -0.76
BDNF-218ENST00000533246 MUC15Q8N387 334 aa10.31□□□□□ -0.76
BDNF-218ENST00000533246 OR4F17Q8NGA8 305 aa10.31□□□□□ -0.76
BDNF-218ENST00000533246 RAB1BQ9H0U4 201 aa10.31□□□□□ -0.76
BDNF-218ENST00000533246 FNDC4Q9H6D8 234 aaPredicted RBP10.31□□□□□ -0.76
BDNF-218ENST00000533246 TCF19Q9Y242 345 aa10.31□□□□□ -0.76
BDNF-218ENST00000533246 C2CD3Q4AC94 2353 aa10.31□□□□□ -0.76
BDNF-218ENST00000533246 KIR2DS2P43631 304 aa10.31□□□□□ -0.76
BDNF-218ENST00000533246 NABP1Q96AH0 204 aa10.31□□□□□ -0.76
BDNF-218ENST00000533246 LINC00470Q9BZP3 86 aa10.31□□□□□ -0.76
BDNF-218ENST00000533246 AAMDCQ9H7C9 122 aa10.31□□□□□ -0.76
BDNF-218ENST00000533246 CISD1Q9NZ45 108 aaKnown RBP10.31□□□□□ -0.76
BDNF-218ENST00000533246 FAM166AQ6J272 317 aa10.31□□□□□ -0.76
BDNF-218ENST00000533246 ST6GALNAC6Q969X2 333 aa10.31□□□□□ -0.76
BDNF-218ENST00000533246 QTRT1Q9BXR0 403 aaKnown RBP10.31□□□□□ -0.76
BDNF-218ENST00000533246 PRRC2CQ9Y520 2896 aaKnown RBP10.31□□□□□ -0.76
BDNF-218ENST00000533246 CEP295Q9C0D2 2601 aa10.31□□□□□ -0.76
BDNF-218ENST00000533246 NTN3O00634 580 aaPredicted RBP10.3□□□□□ -0.76
BDNF-218ENST00000533246 LILRA1O75019 489 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 LINC00869P0C866 280 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 S100A4P26447 101 aaKnown RBP10.3□□□□□ -0.76
BDNF-218ENST00000533246 GGNQ86UU5 652 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 ZNF714Q96N38 554 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 NDFIP1Q9BT67 221 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 TMEM167BQ9NRX6 74 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 ACSF3Q4G176 576 aaPredicted RBP10.3□□□□□ -0.76
BDNF-218ENST00000533246 PEAR1Q5VY43 1037 aaPredicted RBP10.3□□□□□ -0.76
BDNF-218ENST00000533246 LINC01560Q8TB33 94 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 WDYHV1Q96HA8 205 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 IGLV3-32A0A0A0MS00 114 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 HTR1DP28221 377 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 MFAP2P55001 183 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 HERV-K104P63124 156 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 CCL20P78556 96 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 FXYD3Q14802 87 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms