RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 ERICH4A6NGS2 130 aa9.54□□□□□ -0.88
COPB1-209ENST00000533096 K7EMT4 169 aa9.54□□□□□ -0.88
COPB1-209ENST00000533096 M0R2N4 97 aa9.54□□□□□ -0.88
COPB1-209ENST00000533096 NDUFA4O00483 81 aa9.54□□□□□ -0.88
COPB1-209ENST00000533096 CA1P00915 261 aaPredicted RBP9.54□□□□□ -0.88
COPB1-209ENST00000533096 TRAPPC2P0DI81 140 aa9.54□□□□□ -0.88
COPB1-209ENST00000533096 TRAPPC2BP0DI82 140 aa9.54□□□□□ -0.88
COPB1-209ENST00000533096 GNG2P59768 71 aa9.54□□□□□ -0.88
COPB1-209ENST00000533096 EIF4EBP1Q13541 118 aaPredicted RBP9.54□□□□□ -0.88
COPB1-209ENST00000533096 TMEM187Q14656 261 aa9.54□□□□□ -0.88
COPB1-209ENST00000533096 RCN1Q15293 331 aa9.54□□□□□ -0.88
COPB1-209ENST00000533096 HACD4Q5VWC8 232 aa9.54□□□□□ -0.88
COPB1-209ENST00000533096 SCARB1Q8WTV0 552 aa9.54□□□□□ -0.88
COPB1-209ENST00000533096 BSCL2Q96G97 398 aaPredicted RBP9.54□□□□□ -0.88
COPB1-209ENST00000533096 MGLLQ99685 303 aa9.54□□□□□ -0.88
COPB1-209ENST00000533096 BET1LQ9NYM9 111 aa9.54□□□□□ -0.88
COPB1-209ENST00000533096 C21orf62Q9NYP8 219 aa9.54□□□□□ -0.88
COPB1-209ENST00000533096 ANXA10Q9UJ72 324 aa9.54□□□□□ -0.88
COPB1-209ENST00000533096 TPRKBQ9Y3C4 175 aa9.54□□□□□ -0.88
COPB1-209ENST00000533096 TMEM235A6NFC5 223 aa9.53□□□□□ -0.88
COPB1-209ENST00000533096 RGS10O43665 173 aa9.53□□□□□ -0.88
COPB1-209ENST00000533096 MRPS14O60783 128 aaKnown RBP9.53□□□□□ -0.88
COPB1-209ENST00000533096 SERPINE2P07093 398 aa9.53□□□□□ -0.88
COPB1-209ENST00000533096 RAB3BP20337 219 aa9.53□□□□□ -0.88
COPB1-209ENST00000533096 FCGR2CP31995 323 aa9.53□□□□□ -0.88
COPB1-209ENST00000533096 ADMP35318 185 aa9.53□□□□□ -0.88
COPB1-209ENST00000533096 TCTAP57738 103 aa9.53□□□□□ -0.88
COPB1-209ENST00000533096 RPL11P62913 178 aaKnown RBP9.53□□□□□ -0.88
COPB1-209ENST00000533096 MLLT11Q13015 90 aaPredicted RBP9.53□□□□□ -0.88
COPB1-209ENST00000533096 ARL6IP1Q15041 203 aa9.53□□□□□ -0.88
COPB1-209ENST00000533096 TMEM116Q8NCL8 245 aa9.53□□□□□ -0.88
COPB1-209ENST00000533096 GIMAP1Q8WWP7 306 aa9.53□□□□□ -0.88
COPB1-209ENST00000533096 CMTM3Q96MX0 182 aa9.53□□□□□ -0.88
COPB1-209ENST00000533096 QTRT1Q9BXR0 403 aaKnown RBP9.53□□□□□ -0.88
COPB1-209ENST00000533096 SLC5A7Q9GZV3 580 aa9.53□□□□□ -0.88
COPB1-209ENST00000533096 DCSTAMPQ9H295 470 aa9.53□□□□□ -0.88
COPB1-209ENST00000533096 KIAA1109Q2LD37 5005 aa9.53□□□□□ -0.88
COPB1-209ENST00000533096 CHEK1O14757 476 aa9.52□□□□□ -0.89
COPB1-209ENST00000533096 NQO2P16083 231 aa9.52□□□□□ -0.89
COPB1-209ENST00000533096 MYL9P24844 172 aa9.52□□□□□ -0.89
COPB1-209ENST00000533096 HLA-DMBP28068 263 aa9.52□□□□□ -0.89
COPB1-209ENST00000533096 FXYD4P59646 89 aa9.52□□□□□ -0.89
COPB1-209ENST00000533096 ARPC4P59998 168 aa9.52□□□□□ -0.89
COPB1-209ENST00000533096 WT1-ASQ06250 92 aa9.52□□□□□ -0.89
COPB1-209ENST00000533096 SSX1Q16384 188 aa9.52□□□□□ -0.89
COPB1-209ENST00000533096 LEMD1Q68G75 181 aa9.52□□□□□ -0.89
COPB1-209ENST00000533096 SPSB3Q6PJ21 355 aa9.52□□□□□ -0.89
COPB1-209ENST00000533096 ZNF773Q6PK81 442 aa9.52□□□□□ -0.89
COPB1-209ENST00000533096 CENPSQ8N2Z9 138 aa9.52□□□□□ -0.89
COPB1-209ENST00000533096 GDPD1Q8N9F7 314 aa9.52□□□□□ -0.89
COPB1-209ENST00000533096 OR51H1Q8NH63 302 aa9.52□□□□□ -0.89
COPB1-209ENST00000533096 TMEM140Q9NV12 185 aa9.52□□□□□ -0.89
COPB1-209ENST00000533096 NSG2Q9Y328 171 aa9.52□□□□□ -0.89
COPB1-209ENST00000533096 TRAV14DV4A0A0A6YYC5 116 aa9.51□□□□□ -0.89
COPB1-209ENST00000533096 TRAV1-2A0A0B4J238 106 aa9.51□□□□□ -0.89
COPB1-209ENST00000533096 IGHV3-66A0A0C4DH42 116 aa9.51□□□□□ -0.89
COPB1-209ENST00000533096 IGHV7-4-1A0A0J9YVY3 117 aa9.51□□□□□ -0.89
COPB1-209ENST00000533096 C15orf62A8K5M9 175 aa9.51□□□□□ -0.89
COPB1-209ENST00000533096 DNASE2O00115 360 aaPredicted RBP9.51□□□□□ -0.89
COPB1-209ENST00000533096 CASQ2O14958 399 aaPredicted RBP9.51□□□□□ -0.89
COPB1-209ENST00000533096 SSX5O60225 188 aa9.51□□□□□ -0.89
COPB1-209ENST00000533096 HPRT1P00492 218 aa9.51□□□□□ -0.89
COPB1-209ENST00000533096 IGHV3-48P01763 117 aa9.51□□□□□ -0.89
COPB1-209ENST00000533096 CTSGP08311 255 aa9.51□□□□□ -0.89
COPB1-209ENST00000533096 MED14OSP0DP75 135 aa9.51□□□□□ -0.89
COPB1-209ENST00000533096 TAS2R31P59538 309 aa9.51□□□□□ -0.89
COPB1-209ENST00000533096 DEFB131AP59861 70 aa9.51□□□□□ -0.89
COPB1-209ENST00000533096 PAFAH1B2P68402 229 aa9.51□□□□□ -0.89
COPB1-209ENST00000533096 LINC00336Q6ZUF6 198 aa9.51□□□□□ -0.89
COPB1-209ENST00000533096 TCF24Q7RTU0 167 aa9.51□□□□□ -0.89
COPB1-209ENST00000533096 GVQW1Q8N7I0 195 aa9.51□□□□□ -0.89
COPB1-209ENST00000533096 OR13F1Q8NGS4 319 aa9.51□□□□□ -0.89
COPB1-209ENST00000533096 C11orf68Q9H3H3 251 aaKnown RBP9.51□□□□□ -0.89
COPB1-209ENST00000533096 ETV7Q9Y603 341 aa9.51□□□□□ -0.89
COPB1-209ENST00000533096 PRSS29PA6NIE9 313 aa9.5□□□□□ -0.89
COPB1-209ENST00000533096 C11orf94C9JXX5 98 aa9.5□□□□□ -0.89
COPB1-209ENST00000533096 OGFRL1Q5TC84 451 aaPredicted RBP9.5□□□□□ -0.89
COPB1-209ENST00000533096 AADACL3Q5VUY0 350 aa9.5□□□□□ -0.89
COPB1-209ENST00000533096 C22orf42Q6IC83 251 aa9.5□□□□□ -0.89
COPB1-209ENST00000533096 ZNF767PQ75MW2 155 aa9.5□□□□□ -0.89
COPB1-209ENST00000533096 NR2C2APQ86WQ0 139 aa9.5□□□□□ -0.89
COPB1-209ENST00000533096 OR1L8Q8NGR8 309 aa9.5□□□□□ -0.89
COPB1-209ENST00000533096 SLC25A46Q96AG3 418 aa9.5□□□□□ -0.89
COPB1-209ENST00000533096 MISP3Q96FF7 219 aa9.5□□□□□ -0.89
COPB1-209ENST00000533096 SRSF8Q9BRL6 282 aaKnown RBP9.5□□□□□ -0.89
COPB1-209ENST00000533096 DUSP21Q9H596 190 aa9.5□□□□□ -0.89
COPB1-209ENST00000533096 OR51B2Q9Y5P1 312 aa9.5□□□□□ -0.89
COPB1-209ENST00000533096 F11RQ9Y624 299 aaKnown RBP9.5□□□□□ -0.89
COPB1-209ENST00000533096 DNAH10Q8IVF4 4471 aa9.49□□□□□ -0.89
COPB1-209ENST00000533096 IGHV4-4A0A075B6R2 117 aa9.49□□□□□ -0.89
COPB1-209ENST00000533096 F8W735 103 aaPredicted RBP9.49□□□□□ -0.89
COPB1-209ENST00000533096 EBAG9O00559 213 aa9.49□□□□□ -0.89
COPB1-209ENST00000533096 NUPL2O15504 423 aaKnown RBP9.49□□□□□ -0.89
COPB1-209ENST00000533096 KRASP01116 189 aa9.49□□□□□ -0.89
COPB1-209ENST00000533096 RBMY1A1P0DJD3 496 aaKnown RBP9.49□□□□□ -0.89
COPB1-209ENST00000533096 RBMY1CP0DJD4 496 aa9.49□□□□□ -0.89
COPB1-209ENST00000533096 ERVK-16P61578 105 aa9.49□□□□□ -0.89
COPB1-209ENST00000533096 CATR1Q13166 79 aa9.49□□□□□ -0.89
COPB1-209ENST00000533096 RBMY1FQ15415 496 aaKnown RBP9.49□□□□□ -0.89
COPB1-209ENST00000533096 BEST4Q8NFU0 473 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms