RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 PTGDSP41222 190 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 TBR1Q16650 682 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 TMEM95Q3KNT9 176 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 OR13A1Q8NGR1 328 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 OR10AG1Q8NH19 301 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 Q96M66 194 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 SSBP3Q9BWW4 388 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-232ENST00000532649 C19orf67A6NJJ6 358 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 C1QTNF9BB2RNN3 333 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 EDA2RQ9HAV5 297 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 HSF4Q9ULV5 492 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 TCRBV4S1A1TA0A5B7 111 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 H3BQ15 152 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 LEPROTL1O95214 131 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 REG1AP05451 166 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 ZNRF1Q8ND25 227 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 OR9G1Q8NH87 305 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 OR51M1Q9H341 326 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 RBKSQ9H477 322 aa7.4□□□□□ -1.22
CTNND1-232ENST00000532649 H0Y980 276 aa7.4□□□□□ -1.23
CTNND1-232ENST00000532649 IGHV3-23P01764 117 aa7.4□□□□□ -1.23
CTNND1-232ENST00000532649 CELA3BP08861 270 aa7.4□□□□□ -1.23
CTNND1-232ENST00000532649 SMIM13P0DJ93 91 aa7.4□□□□□ -1.23
CTNND1-232ENST00000532649 KLK2P20151 261 aa7.4□□□□□ -1.23
CTNND1-232ENST00000532649 LCN2P80188 198 aa7.4□□□□□ -1.23
CTNND1-232ENST00000532649 LINC00114Q6XXX2 140 aa7.4□□□□□ -1.23
CTNND1-232ENST00000532649 OR10S1Q8NGN2 331 aa7.4□□□□□ -1.23
CTNND1-232ENST00000532649 RNASE6Q93091 150 aaKnown RBP7.4□□□□□ -1.23
CTNND1-232ENST00000532649 TMEM186Q96B77 213 aa7.4□□□□□ -1.23
CTNND1-232ENST00000532649 SPRR3Q9UBC9 169 aa7.4□□□□□ -1.23
CTNND1-232ENST00000532649 CEP250Q9BV73 2442 aa7.4□□□□□ -1.23
CTNND1-232ENST00000532649 OR11H7Q8NGC8 314 aa7.4□□□□□ -1.23
CTNND1-232ENST00000532649 SLC25A38Q96DW6 304 aa7.4□□□□□ -1.23
CTNND1-232ENST00000532649 QTRT1Q9BXR0 403 aaKnown RBP7.4□□□□□ -1.23
CTNND1-232ENST00000532649 MRPL16Q9NX20 251 aaKnown RBP7.4□□□□□ -1.23
CTNND1-232ENST00000532649 IGHV3-66A0A0C4DH42 116 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 FAM3BP58499 235 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-232ENST00000532649 CD200R1LQ6Q8B3 271 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 AQP3Q92482 292 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 RHOVQ96L33 236 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 RALGAPA1Q6GYQ0 2036 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 ZNF729A6NN14 1252 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-232ENST00000532649 PROB1E7EW31 1015 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 RPL32P62910 135 aaKnown RBP7.39□□□□□ -1.23
CTNND1-232ENST00000532649 PMCHL1Q16048 86 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 ASCL4Q6XD76 172 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 PPP1R3EQ9H7J1 279 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 JPT1Q9UK76 154 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 RRHO14718 337 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 LILRA1O75019 489 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 RPS11P62280 158 aaKnown RBP eCLIP7.39□□□□□ -1.23
CTNND1-232ENST00000532649 TMEM30BQ3MIR4 351 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 FAM89BQ8N5H3 189 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 TMEM160Q9NX00 188 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 TCF20Q9UGU0 1960 aaKnown RBP7.39□□□□□ -1.23
CTNND1-232ENST00000532649 TRGV4A0A0C4DH28 118 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 EIF3GO75821 320 aaKnown RBP eCLIP7.39□□□□□ -1.23
CTNND1-232ENST00000532649 SAA1P0DJI8 122 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-232ENST00000532649 MUC1P15941 1255 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-232ENST00000532649 NEU4Q8WWR8 484 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-232ENST00000532649 DNAJC4Q9NNZ3 241 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 ELF5Q9UKW6 265 aaPredicted RBP7.39□□□□□ -1.23
CTNND1-232ENST00000532649 ZNF506Q5JVG8 444 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 FAM201AQ5SY85 155 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 ISOC2Q96AB3 205 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 GPHA2Q96T91 129 aa7.39□□□□□ -1.23
CTNND1-232ENST00000532649 PGLYRP1O75594 196 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-232ENST00000532649 RNASEH2CQ8TDP1 164 aaKnown RBP7.38□□□□□ -1.23
CTNND1-232ENST00000532649 ALPK2Q86TB3 2170 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 RIF1Q5UIP0 2472 aaKnown RBP7.38□□□□□ -1.23
CTNND1-232ENST00000532649 SAPCD1Q5SSQ6 148 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 UNQ6494/PRO21346Q6UXR6 183 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 PQLC2Q6ZP29 291 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 OR2K2Q8NGT1 345 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 TMEM222Q9H0R3 208 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 IGLV3-32A0A0A0MS00 114 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 TGFAP01135 160 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 HLA-DQA1P01909 254 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 LDLRAD2Q5SZI1 272 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 ACP7Q6ZNF0 438 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 TCF23Q7RTU1 214 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 OR5A1Q8NGJ0 315 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 PLXNA3P51805 1871 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 HLA-DRB1P01911 266 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 CEACAM8P31997 349 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-232ENST00000532649 CDKN1AP38936 164 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 PSG7Q13046 419 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 S100A7L2Q5SY68 101 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 H1FOOQ8IZA3 346 aaPredicted RBP7.38□□□□□ -1.23
CTNND1-232ENST00000532649 C8orf46Q8TAG6 207 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 ST6GAL2Q96JF0 529 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 C1QTNF5Q9BXJ0 243 aa7.38□□□□□ -1.23
CTNND1-232ENST00000532649 MRPL32Q9BYC8 188 aaKnown RBP7.38□□□□□ -1.23
CTNND1-232ENST00000532649 FOLR2P14207 255 aa7.37□□□□□ -1.23
CTNND1-232ENST00000532649 PPP1R27Q86WC6 154 aa7.37□□□□□ -1.23
CTNND1-232ENST00000532649 OR11H4Q8NGC9 324 aa7.37□□□□□ -1.23
CTNND1-232ENST00000532649 IGKV3D-20A0A0C4DH25 116 aa7.37□□□□□ -1.23
CTNND1-232ENST00000532649 M0R381 172 aa7.37□□□□□ -1.23
CTNND1-232ENST00000532649 CLDND2Q8NHS1 167 aa7.37□□□□□ -1.23
CTNND1-232ENST00000532649 HSPB9Q9BQS6 159 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms