RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 PSMG3Q9BT73 122 aaPredicted RBP12.45□□□□□ -0.42
PCDHA9-202ENST00000532602 HIST1H2BAQ96A08 127 aa12.45□□□□□ -0.42
PCDHA9-202ENST00000532602 PGLYRP4Q96LB8 373 aa12.45□□□□□ -0.42
PCDHA9-202ENST00000532602 CBY1Q9Y3M2 126 aa12.45□□□□□ -0.42
PCDHA9-202ENST00000532602 CRYBB3P26998 211 aa12.45□□□□□ -0.42
PCDHA9-202ENST00000532602 GEMIN7Q9H840 131 aaKnown RBP12.45□□□□□ -0.42
PCDHA9-202ENST00000532602 MRPS16Q9Y3D3 137 aaKnown RBP12.45□□□□□ -0.42
PCDHA9-202ENST00000532602 IGHV3-49A0A0A0MS15 119 aa12.44□□□□□ -0.42
PCDHA9-202ENST00000532602 FOXI3A8MTJ6 420 aaPredicted RBP12.44□□□□□ -0.42
PCDHA9-202ENST00000532602 LINC00305Q7Z4B0 112 aa12.44□□□□□ -0.42
PCDHA9-202ENST00000532602 OR13A1Q8NGR1 328 aa12.44□□□□□ -0.42
PCDHA9-202ENST00000532602 ZMAT5Q9UDW3 170 aaKnown RBP12.44□□□□□ -0.42
PCDHA9-202ENST00000532602 MDC1Q14676 2089 aaKnown RBP12.44□□□□□ -0.42
PCDHA9-202ENST00000532602 C1QL1O75973 258 aa12.44□□□□□ -0.42
PCDHA9-202ENST00000532602 THBDP07204 575 aa12.44□□□□□ -0.42
PCDHA9-202ENST00000532602 FGFBP3Q8TAT2 258 aa12.44□□□□□ -0.42
PCDHA9-202ENST00000532602 SGK494Q96LW2 274 aa12.44□□□□□ -0.42
PCDHA9-202ENST00000532602 NPFFO15130 113 aa12.44□□□□□ -0.42
PCDHA9-202ENST00000532602 F12P00748 615 aaPredicted RBP12.44□□□□□ -0.42
PCDHA9-202ENST00000532602 GNLYP22749 145 aa12.44□□□□□ -0.42
PCDHA9-202ENST00000532602 SEMA5BQ9P283 1151 aa12.44□□□□□ -0.42
PCDHA9-202ENST00000532602 IGLV3-32A0A0A0MS00 114 aa12.44□□□□□ -0.42
PCDHA9-202ENST00000532602 PPP1R17O96001 155 aa12.44□□□□□ -0.42
PCDHA9-202ENST00000532602 TCTAP57738 103 aa12.44□□□□□ -0.42
PCDHA9-202ENST00000532602 SIGLEC5O15389 551 aa12.43□□□□□ -0.42
PCDHA9-202ENST00000532602 RBFOX2O43251 390 aaKnown RBP eCLIP12.43□□□□□ -0.42
PCDHA9-202ENST00000532602 NPIPB7O75200 414 aa12.43□□□□□ -0.42
PCDHA9-202ENST00000532602 ITLN2Q8WWU7 325 aaPredicted RBP12.43□□□□□ -0.42
PCDHA9-202ENST00000532602 TP53RKQ96S44 253 aa12.43□□□□□ -0.42
PCDHA9-202ENST00000532602 AMY1AP04745 511 aa12.43□□□□□ -0.42
PCDHA9-202ENST00000532602 RND3P61587 244 aa12.43□□□□□ -0.42
PCDHA9-202ENST00000532602 VN1R17PQ8TDU5 208 aa12.43□□□□□ -0.42
PCDHA9-202ENST00000532602 CD69Q07108 199 aa12.43□□□□□ -0.42
PCDHA9-202ENST00000532602 ERASQ7Z444 233 aa12.43□□□□□ -0.42
PCDHA9-202ENST00000532602 TRAF4Q9BUZ4 470 aaPredicted RBP12.43□□□□□ -0.42
PCDHA9-202ENST00000532602 CACNG8Q8WXS5 425 aa12.43□□□□□ -0.42
PCDHA9-202ENST00000532602 ZNF256Q9Y2P7 627 aaPredicted RBP12.43□□□□□ -0.42
PCDHA9-202ENST00000532602 LGALS3P17931 250 aaKnown RBP12.42□□□□□ -0.42
PCDHA9-202ENST00000532602 GCHFRP30047 84 aa12.42□□□□□ -0.42
PCDHA9-202ENST00000532602 PLSCR2Q9NRY7 297 aa12.42□□□□□ -0.42
PCDHA9-202ENST00000532602 RIF1Q5UIP0 2472 aaKnown RBP12.42□□□□□ -0.42
PCDHA9-202ENST00000532602 IGHV1-18A0A0C4DH31 117 aa12.42□□□□□ -0.42
PCDHA9-202ENST00000532602 LEPROTL1O95214 131 aa12.42□□□□□ -0.42
PCDHA9-202ENST00000532602 ZNF385CQ66K41 422 aaPredicted RBP12.42□□□□□ -0.42
PCDHA9-202ENST00000532602 IL18BPO95998 194 aa12.42□□□□□ -0.42
PCDHA9-202ENST00000532602 SMIM6P0DI80 62 aa12.42□□□□□ -0.42
PCDHA9-202ENST00000532602 GPR183P32249 361 aa12.42□□□□□ -0.42
PCDHA9-202ENST00000532602 RNASEH2CQ8TDP1 164 aaKnown RBP12.42□□□□□ -0.42
PCDHA9-202ENST00000532602 TMEM262E9PQX1 116 aa12.42□□□□□ -0.42
PCDHA9-202ENST00000532602 CD24P25063 80 aa12.42□□□□□ -0.42
PCDHA9-202ENST00000532602 TMEM101Q96IK0 257 aa12.42□□□□□ -0.42
PCDHA9-202ENST00000532602 ACACAQ13085 2346 aa12.42□□□□□ -0.42
PCDHA9-202ENST00000532602 SHISA3A0PJX4 238 aa12.42□□□□□ -0.42
PCDHA9-202ENST00000532602 MBNL2Q5VZF2 373 aaKnown RBP12.42□□□□□ -0.42
PCDHA9-202ENST00000532602 SCN8AQ9UQD0 1980 aa12.42□□□□□ -0.42
PCDHA9-202ENST00000532602 NBR2O15453 112 aa12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 ASIPP42127 132 aa12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 VDAC2P45880 294 aaPredicted RBP12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 FOXG1P55316 489 aaPredicted RBP12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 ICAM4Q14773 271 aa12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 C2orf68Q2NKX9 166 aa12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 MEIG1Q5JSS6 88 aa12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 LYZL4Q96KX0 146 aa12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 FOXA2Q9Y261 457 aaPredicted RBP12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 NBEAP1P0C6P0 100 aa12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 CCL3L1P16619 93 aa12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 GPX4P36969 197 aaPredicted RBP12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 MDKP21741 143 aaPredicted RBP12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 MRPL20Q9BYC9 149 aaKnown RBP12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 AKAP6Q13023 2319 aa12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 IGHV3OR16-8A0A075B7F1 116 aa12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 H3BVH4 76 aa12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 TIMP3P35625 211 aa12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 TNFRSF18Q9Y5U5 241 aa12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 PRSS2P07478 247 aa12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 IL6RP08887 468 aaPredicted RBP12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 UCP1P25874 307 aa12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 PMCHL1Q16048 86 aa12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 UNQ6494/PRO21346Q6UXR6 183 aa12.41□□□□□ -0.42
PCDHA9-202ENST00000532602 A0A087X0M5 115 aa12.4□□□□□ -0.42
PCDHA9-202ENST00000532602 A0A1B0GX30 115 aa12.4□□□□□ -0.42
PCDHA9-202ENST00000532602 C9JCJ5 164 aa12.4□□□□□ -0.42
PCDHA9-202ENST00000532602 COLCA1Q6ZS62 124 aa12.4□□□□□ -0.42
PCDHA9-202ENST00000532602 OR10AG1Q8NH19 301 aa12.4□□□□□ -0.42
PCDHA9-202ENST00000532602 ZNF250P15622 560 aa12.4□□□□□ -0.42
PCDHA9-202ENST00000532602 ZNF660Q6AZW8 331 aaPredicted RBP12.4□□□□□ -0.42
PCDHA9-202ENST00000532602 PAM16Q9Y3D7 125 aa12.4□□□□□ -0.42
PCDHA9-202ENST00000532602 AGAP20933 346 aa12.4□□□□□ -0.42
PCDHA9-202ENST00000532602 FBLL1A6NHQ2 334 aaKnown RBP12.4□□□□□ -0.42
PCDHA9-202ENST00000532602 TMEM250H0YL14 139 aa12.4□□□□□ -0.42
PCDHA9-202ENST00000532602 RRHO14718 337 aa12.4□□□□□ -0.42
PCDHA9-202ENST00000532602 TEX45Q8NA69 505 aa12.4□□□□□ -0.42
PCDHA9-202ENST00000532602 DUX3Q96PT4 197 aa12.4□□□□□ -0.42
PCDHA9-202ENST00000532602 TMEM133Q9H2Q1 129 aa12.4□□□□□ -0.42
PCDHA9-202ENST00000532602 TRBV9A0A0B4J1U6 114 aa12.39□□□□□ -0.43
PCDHA9-202ENST00000532602 PQLC2LA1A4F0 135 aa12.39□□□□□ -0.43
PCDHA9-202ENST00000532602 KLHDC3Q9BQ90 382 aa12.39□□□□□ -0.43
PCDHA9-202ENST00000532602 PLXNA3P51805 1871 aa12.39□□□□□ -0.43
PCDHA9-202ENST00000532602 TRAV20A0A0B4J274 112 aa12.39□□□□□ -0.43
PCDHA9-202ENST00000532602 ZNF383Q8NA42 475 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms