RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 MON2Q7Z3U7 1717 aa6.91□□□□□ -1.3
CTNND1-231ENST00000532463 MYMXA0A1B0GTQ4 84 aa6.91□□□□□ -1.3
CTNND1-231ENST00000532463 TRGV3P03979 118 aa6.91□□□□□ -1.3
CTNND1-231ENST00000532463 PGFP49763 221 aa6.91□□□□□ -1.3
CTNND1-231ENST00000532463 LAGE3Q14657 143 aa6.91□□□□□ -1.3
CTNND1-231ENST00000532463 WFDC6Q9BQY6 131 aa6.91□□□□□ -1.3
CTNND1-231ENST00000532463 OTORQ9NRC9 128 aa6.91□□□□□ -1.3
CTNND1-231ENST00000532463 OSTCQ9NRP0 149 aa6.91□□□□□ -1.3
CTNND1-231ENST00000532463 R4GN57 208 aa6.91□□□□□ -1.3
CTNND1-231ENST00000532463 A0A1W2PPI3 338 aa6.91□□□□□ -1.3
CTNND1-231ENST00000532463 IGFBP6P24592 240 aaPredicted RBP6.91□□□□□ -1.3
CTNND1-231ENST00000532463 GUSBP1Q15486 140 aa6.91□□□□□ -1.3
CTNND1-231ENST00000532463 CBLN3Q6UW01 205 aa6.91□□□□□ -1.3
CTNND1-231ENST00000532463 TPRP12270 2363 aaKnown RBP6.9□□□□□ -1.3
CTNND1-231ENST00000532463 A0A087WX48 190 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 NPIPB13A6NJU9 1138 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 NPIPB5A8MRT5 1133 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 IGHG3P01860 377 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 HLA-DQB1P01920 261 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 EGR2P11161 476 aaPredicted RBP6.9□□□□□ -1.3
CTNND1-231ENST00000532463 RPL23P62829 140 aaKnown RBP6.9□□□□□ -1.3
CTNND1-231ENST00000532463 FOXL1Q12952 345 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 ZNF784Q8NCA9 323 aaPredicted RBP6.9□□□□□ -1.3
CTNND1-231ENST00000532463 HIST1H2BLQ99880 126 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 TRGV11A0A075B6L2 103 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 IGHV3OR16-13A0A075B7E8 117 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 IGHV3-74A0A0B4J1X5 117 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 A8MXK9 166 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 CEACAM1P13688 526 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 CCL20P78556 96 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 CCL8P80075 99 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 IFITM2Q01629 132 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 TMEM174Q8WUU8 243 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 TMEM54Q969K7 222 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 Q9H3A6 140 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 KLHDC2Q9Y2U9 406 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 SPAG17Q6Q759 2223 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 F2Z2F3 143 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 DUSP14O95147 198 aaKnown RBP6.9□□□□□ -1.3
CTNND1-231ENST00000532463 SYNJ2BPP57105 145 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 TMEM187Q14656 261 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 PEAR1Q5VY43 1037 aaPredicted RBP6.9□□□□□ -1.3
CTNND1-231ENST00000532463 C17orf99Q6UX52 265 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 MSRB3Q8IXL7 192 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 SLC50A1Q9BRV3 221 aa6.9□□□□□ -1.3
CTNND1-231ENST00000532463 HIST1H2BKO60814 126 aa6.9□□□□□ -1.31
CTNND1-231ENST00000532463 HIST1H2BJP06899 126 aa6.9□□□□□ -1.31
CTNND1-231ENST00000532463 HIST1H2BOP23527 126 aa6.9□□□□□ -1.31
CTNND1-231ENST00000532463 HIST1H2BBP33778 126 aa6.9□□□□□ -1.31
CTNND1-231ENST00000532463 HIST1H2BDP58876 126 aa6.9□□□□□ -1.31
CTNND1-231ENST00000532463 HIST1H2BCP62807 126 aa6.9□□□□□ -1.31
CTNND1-231ENST00000532463 C3AR1Q16581 482 aa6.9□□□□□ -1.31
CTNND1-231ENST00000532463 HIST2H2BEQ16778 126 aa6.9□□□□□ -1.31
CTNND1-231ENST00000532463 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.9□□□□□ -1.31
CTNND1-231ENST00000532463 FAM90A2PQ658T7 463 aa6.9□□□□□ -1.31
CTNND1-231ENST00000532463 DTX1Q86Y01 620 aa6.9□□□□□ -1.31
CTNND1-231ENST00000532463 HIST1H2BHQ93079 126 aa6.9□□□□□ -1.31
CTNND1-231ENST00000532463 HIST1H2BNQ99877 126 aa6.9□□□□□ -1.31
CTNND1-231ENST00000532463 HIST1H2BMQ99879 126 aa6.9□□□□□ -1.31
CTNND1-231ENST00000532463 TSSC4Q9Y5U2 329 aaPredicted RBP6.9□□□□□ -1.31
CTNND1-231ENST00000532463 IGHV3-35A0A0C4DH35 117 aa6.9□□□□□ -1.31
CTNND1-231ENST00000532463 ATP5G3P48201 142 aa6.9□□□□□ -1.31
CTNND1-231ENST00000532463 NEGR1Q7Z3B1 354 aa6.9□□□□□ -1.31
CTNND1-231ENST00000532463 LRRC61Q9BV99 259 aa6.9□□□□□ -1.31
CTNND1-231ENST00000532463 ASCC3Q8N3C0 2202 aaKnown RBP6.89□□□□□ -1.31
CTNND1-231ENST00000532463 MMP23AO75900 390 aa6.89□□□□□ -1.31
CTNND1-231ENST00000532463 MPV17L2Q567V2 206 aa6.89□□□□□ -1.31
CTNND1-231ENST00000532463 C6orf226Q5I0X4 101 aa6.89□□□□□ -1.31
CTNND1-231ENST00000532463 TEX43Q6ZNM6 134 aa6.89□□□□□ -1.31
CTNND1-231ENST00000532463 PRADC1Q9BSG0 188 aa6.89□□□□□ -1.31
CTNND1-231ENST00000532463 SIGLEC1Q9BZZ2 1709 aa6.89□□□□□ -1.31
CTNND1-231ENST00000532463 SPTY2D1-AS1A0A0U1RR47 76 aa6.89□□□□□ -1.31
CTNND1-231ENST00000532463 CD160O95971 181 aa6.89□□□□□ -1.31
CTNND1-231ENST00000532463 H2BFSP57053 126 aa6.89□□□□□ -1.31
CTNND1-231ENST00000532463 MRPS18AQ9NVS2 196 aaKnown RBP6.89□□□□□ -1.31
CTNND1-231ENST00000532463 HAPLN4Q86UW8 402 aa6.89□□□□□ -1.31
CTNND1-231ENST00000532463 AQP3Q92482 292 aa6.89□□□□□ -1.31
CTNND1-231ENST00000532463 KIAA0100Q14667 2235 aaKnown RBP6.89□□□□□ -1.31
CTNND1-231ENST00000532463 ZNF708P17019 499 aa6.89□□□□□ -1.31
CTNND1-231ENST00000532463 LY6EQ16553 131 aa6.89□□□□□ -1.31
CTNND1-231ENST00000532463 ADAMTSL3P82987 1691 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 PRSS23O95084 383 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 SRD5A1P18405 259 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 COL9A1P20849 921 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 R3HDMLQ9H3Y0 253 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 C5orf66Q9H5L9 145 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 PEMTQ9UBM1 199 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 FMN2Q9NZ56 1722 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 ACTL10Q5JWF8 245 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 SLC25A38Q96DW6 304 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 KLHDC3Q9BQ90 382 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 SPATA25Q9BR10 227 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 ARRDC1-AS1Q9H2J1 176 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 PDFQ9HBH1 243 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 C21orf62Q9NYP8 219 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 A0A087X0K7 114 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 PROB1E7EW31 1015 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 RAMP1O60894 148 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 UCP2P55851 309 aa6.88□□□□□ -1.31
CTNND1-231ENST00000532463 FAM27BQ5VT28 67 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms