RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 ZNF329Q86UD4 541 aa6.59□□□□□ -1.35
CTNND1-230ENST00000532245 FAM181BA6NEQ2 426 aa6.59□□□□□ -1.36
CTNND1-230ENST00000532245 FAM90A26D6RGX4 464 aa6.59□□□□□ -1.36
CTNND1-230ENST00000532245 P01737 135 aa6.59□□□□□ -1.36
CTNND1-230ENST00000532245 TCL1AP56279 114 aa6.59□□□□□ -1.36
CTNND1-230ENST00000532245 MANBALQ9NQG1 85 aa6.59□□□□□ -1.36
CTNND1-230ENST00000532245 HMSDA8MTL9 139 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 RRHO14718 337 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 SRSF10O75494 262 aaKnown RBP6.58□□□□□ -1.36
CTNND1-230ENST00000532245 RPL7P18124 248 aaKnown RBP6.58□□□□□ -1.36
CTNND1-230ENST00000532245 DEFB113Q30KQ7 82 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 DGAT2L7PQ6IED9 249 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 TEX261Q6UWH6 196 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 FOXL2NBQ6ZUU3 175 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 IL22RA2Q969J5 263 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 DNAJC4Q9NNZ3 241 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 NPDC1Q9NQX5 325 aaPredicted RBP6.58□□□□□ -1.36
CTNND1-230ENST00000532245 TRAV41A0A0B4J266 112 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 IGHV1-3A0A0C4DH29 117 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 SIAH2O43255 324 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 LDLRAD3Q86YD5 345 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 TNFRSF14Q92956 283 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 ST6GAL2Q96JF0 529 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 CTXND1A0A1B0GTU2 59 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 C20orf202A1L168 122 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 HELTA6NFD8 242 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 SAP30O75446 220 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 SCGB1D1O95968 90 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 KLF2Q9Y5W3 355 aaPredicted RBP6.58□□□□□ -1.36
CTNND1-230ENST00000532245 A0A0A6YYD4 124 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 PGPA6NDG6 321 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 RGS13O14921 159 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 RAMP3O60896 148 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 HSPB1P04792 205 aaKnown RBP6.58□□□□□ -1.36
CTNND1-230ENST00000532245 MINOS1Q5TGZ0 78 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 RNF144BQ7Z419 303 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 MINOS1-NBL1R4GNA1 71 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 DENND4CQ5VZ89 1909 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 WNK2Q9Y3S1 2297 aa6.58□□□□□ -1.36
CTNND1-230ENST00000532245 EMP1P54849 157 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 CD69Q07108 199 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 Q8NA96 180 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 OR51G1Q8NGK1 321 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 AURKAIP1Q9NWT8 199 aaPredicted RBP6.57□□□□□ -1.36
CTNND1-230ENST00000532245 CDC42EP3Q9UKI2 254 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 UTRNP46939 3433 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 IGSF23A1L1A6 192 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 MPDU1O75352 247 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 WISP2O76076 250 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 MMP9P14780 707 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 RPL35P42766 123 aaKnown RBP6.57□□□□□ -1.36
CTNND1-230ENST00000532245 NUTF2P61970 127 aaKnown RBP6.57□□□□□ -1.36
CTNND1-230ENST00000532245 SPANXN1Q5VSR9 72 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 DKK4Q9UBT3 224 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 RBFOX3A6NFN3 312 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 CFDP00746 253 aaPredicted RBP6.57□□□□□ -1.36
CTNND1-230ENST00000532245 GPX1P07203 203 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 RAB5AP20339 215 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 GATA3P23771 443 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 TRAF4Q9BUZ4 470 aaPredicted RBP6.57□□□□□ -1.36
CTNND1-230ENST00000532245 PLSCR2Q9NRY7 297 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 LYRM2Q9NU23 88 aaPredicted RBP6.57□□□□□ -1.36
CTNND1-230ENST00000532245 UPK2O00526 184 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 CD33P20138 364 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 AGAP20933 346 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 EFNB1P98172 346 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 FHL1Q13642 323 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 Q6ZR03 302 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 NKX6-2Q9C056 277 aaPredicted RBP6.57□□□□□ -1.36
CTNND1-230ENST00000532245 IFI27L2Q9H2X8 130 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 MMP26Q9NRE1 261 aa6.57□□□□□ -1.36
CTNND1-230ENST00000532245 BUB1B-PAK6H3BSN5 160 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 CD99P14209 185 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 C3orf36Q3SXR2 165 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 LGALSLQ3ZCW2 172 aaPredicted RBP6.56□□□□□ -1.36
CTNND1-230ENST00000532245 C5orf24Q7Z6I8 188 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 NR2C2APQ86WQ0 139 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 COMMD1Q8N668 190 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 TAF15Q92804 592 aaKnown RBP eCLIP6.56□□□□□ -1.363e-8■■■□□ 14.9
CTNND1-230ENST00000532245 NEURL2Q9BR09 285 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 GOLT1BQ9Y3E0 138 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 C7orf66A4D0T2 115 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 SHISA9B4DS77 424 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 OTX1P32242 354 aaPredicted RBP6.56□□□□□ -1.36
CTNND1-230ENST00000532245 DLX1P56177 255 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 EFNB3Q15768 340 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 RAB9AP51151 201 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 TDGF1P3P51864 188 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 DHRS11Q6UWP2 260 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 FA2HQ7L5A8 372 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 LINC00305Q7Z4B0 112 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 SGK494Q96LW2 274 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 IGKV1D-8A0A087WSZ0 117 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 SEC14L6B5MCN3 397 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 OR9G9P0C7N8 305 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 DUTP33316 252 aaKnown RBP6.56□□□□□ -1.36
CTNND1-230ENST00000532245 PSG9Q00887 426 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 GTF3C1Q12789 2109 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 PPP1R2P9O14990 202 aa6.56□□□□□ -1.36
CTNND1-230ENST00000532245 IGLV1-44P01699 117 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms