RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 LMO1P25800 156 aa9.41□□□□□ -0.9
NXF1-211ENST00000531709 TIMP3P35625 211 aa9.41□□□□□ -0.9
NXF1-211ENST00000531709 PRR31Q5SQ13 230 aa9.41□□□□□ -0.9
NXF1-211ENST00000531709 RNASEKQ6P5S7 137 aaKnown RBP9.41□□□□□ -0.9
NXF1-211ENST00000531709 TEX38Q6PEX7 206 aa9.41□□□□□ -0.9
NXF1-211ENST00000531709 ZADH2Q8N4Q0 377 aa9.41□□□□□ -0.9
NXF1-211ENST00000531709 CCL17Q92583 94 aa9.41□□□□□ -0.9
NXF1-211ENST00000531709 STARD4Q96DR4 205 aa9.41□□□□□ -0.9
NXF1-211ENST00000531709 MGST2Q99735 147 aa9.41□□□□□ -0.9
NXF1-211ENST00000531709 JPT1Q9UK76 154 aa9.41□□□□□ -0.9
NXF1-211ENST00000531709 RBFOX2O43251 390 aaKnown RBP eCLIP9.41□□□□□ -0.9
NXF1-211ENST00000531709 GGCTO75223 188 aaKnown RBP9.41□□□□□ -0.9
NXF1-211ENST00000531709 USF1P22415 310 aaPredicted RBP9.41□□□□□ -0.9
NXF1-211ENST00000531709 EFNB3Q15768 340 aa9.41□□□□□ -0.9
NXF1-211ENST00000531709 Q6ZR03 302 aa9.41□□□□□ -0.9
NXF1-211ENST00000531709 HARBI1Q96MB7 349 aa9.41□□□□□ -0.9
NXF1-211ENST00000531709 J3QW42 95 aa9.41□□□□□ -0.9
NXF1-211ENST00000531709 TNFSF10P50591 281 aa9.41□□□□□ -0.9
NXF1-211ENST00000531709 LBHQ53QV2 105 aaPredicted RBP9.41□□□□□ -0.9
NXF1-211ENST00000531709 Q6ZN92 141 aa9.41□□□□□ -0.9
NXF1-211ENST00000531709 DEFB124Q8NES8 71 aa9.41□□□□□ -0.9
NXF1-211ENST00000531709 ZCCHC14Q8WYQ9 949 aaKnown RBP9.41□□□□□ -0.9
NXF1-211ENST00000531709 NPPCP23582 126 aa9.4□□□□□ -0.9
NXF1-211ENST00000531709 SRIP30626 198 aa9.4□□□□□ -0.9
NXF1-211ENST00000531709 BRS3P32247 399 aa9.4□□□□□ -0.9
NXF1-211ENST00000531709 KIR2DS2P43631 304 aa9.4□□□□□ -0.9
NXF1-211ENST00000531709 MFAP2P55001 183 aa9.4□□□□□ -0.9
NXF1-211ENST00000531709 IBA57Q5T440 356 aaKnown RBP9.4□□□□□ -0.9
NXF1-211ENST00000531709 ZNF835Q9Y2P0 537 aa9.4□□□□□ -0.9
NXF1-211ENST00000531709 IGHV2OR16-5A0A0B4J2B6 119 aa9.4□□□□□ -0.9
NXF1-211ENST00000531709 SPAARA0A1B0GVQ0 90 aa9.4□□□□□ -0.9
NXF1-211ENST00000531709 HNRNPA3P51991 378 aaKnown RBP9.4□□□□□ -0.9
NXF1-211ENST00000531709 FAM19A2Q8N3H0 131 aa9.4□□□□□ -0.9
NXF1-211ENST00000531709 YTHDF2Q9Y5A9 579 aaKnown RBP9.4□□□□□ -0.9
NXF1-211ENST00000531709 CA1P00915 261 aaPredicted RBP9.4□□□□□ -0.91
NXF1-211ENST00000531709 PAFAH1B2P68402 229 aa9.4□□□□□ -0.91
NXF1-211ENST00000531709 ACSF3Q4G176 576 aaPredicted RBP9.4□□□□□ -0.91
NXF1-211ENST00000531709 TXNDC17Q9BRA2 123 aa9.4□□□□□ -0.91
NXF1-211ENST00000531709 DYNLRB1Q9NP97 96 aa9.4□□□□□ -0.91
NXF1-211ENST00000531709 ELOVL5Q9NYP7 299 aa9.4□□□□□ -0.91
NXF1-211ENST00000531709 IL36BQ9NZH7 164 aa9.4□□□□□ -0.91
NXF1-211ENST00000531709 RNF7Q9UBF6 113 aa9.4□□□□□ -0.91
NXF1-211ENST00000531709 PRNDQ9UKY0 176 aa9.4□□□□□ -0.91
NXF1-211ENST00000531709 EXPH5Q8NEV8 1989 aa9.4□□□□□ -0.91
NXF1-211ENST00000531709 FRYQ5TBA9 3013 aa9.39□□□□□ -0.91
NXF1-211ENST00000531709 NKX6-3A6NJ46 265 aa9.39□□□□□ -0.91
NXF1-211ENST00000531709 VSTM5A8MXK1 200 aa9.39□□□□□ -0.91
NXF1-211ENST00000531709 STAG3L2P0CL84 134 aa9.39□□□□□ -0.91
NXF1-211ENST00000531709 STAG3L3P0CL85 134 aa9.39□□□□□ -0.91
NXF1-211ENST00000531709 SRSF6Q13247 344 aaKnown RBP9.39□□□□□ -0.91
NXF1-211ENST00000531709 MOB3BQ86TA1 216 aa9.39□□□□□ -0.91
NXF1-211ENST00000531709 DMRTC2Q8IXT2 367 aaPredicted RBP9.39□□□□□ -0.91
NXF1-211ENST00000531709 WNT10AQ9GZT5 417 aa9.39□□□□□ -0.91
NXF1-211ENST00000531709 TMEM106BQ9NUM4 274 aa9.39□□□□□ -0.91
NXF1-211ENST00000531709 RPLP1P05386 114 aaKnown RBP9.39□□□□□ -0.91
NXF1-211ENST00000531709 SAA2-SAA4A0A096LPE2 208 aa9.39□□□□□ -0.91
NXF1-211ENST00000531709 A6NNC1 897 aa9.39□□□□□ -0.91
NXF1-211ENST00000531709 H3BTX0 84 aa9.39□□□□□ -0.91
NXF1-211ENST00000531709 GFRA3O60609 400 aa9.39□□□□□ -0.91
NXF1-211ENST00000531709 SAA2P0DJI9 122 aaPredicted RBP9.39□□□□□ -0.91
NXF1-211ENST00000531709 CHRNB4P30926 498 aa9.39□□□□□ -0.91
NXF1-211ENST00000531709 MLANAQ16655 118 aa9.39□□□□□ -0.91
NXF1-211ENST00000531709 OR2D3Q8NGH3 330 aa9.39□□□□□ -0.91
NXF1-211ENST00000531709 ATG2AQ2TAZ0 1938 aa9.39□□□□□ -0.91
NXF1-211ENST00000531709 IGHV3-72A0A0B4J1Y9 119 aa9.38□□□□□ -0.91
NXF1-211ENST00000531709 SLC25A5P05141 298 aaKnown RBP9.38□□□□□ -0.91
NXF1-211ENST00000531709 WDR73Q6P4I2 378 aa9.38□□□□□ -0.91
NXF1-211ENST00000531709 FAM216BQ8N7L0 139 aa9.38□□□□□ -0.91
NXF1-211ENST00000531709 MRPL37Q9BZE1 423 aaKnown RBP9.38□□□□□ -0.91
NXF1-211ENST00000531709 HES4Q9HCC6 221 aa9.38□□□□□ -0.91
NXF1-211ENST00000531709 AKAP6Q13023 2319 aa9.38□□□□□ -0.91
NXF1-211ENST00000531709 CACNA1BQ00975 2339 aa9.38□□□□□ -0.91
NXF1-211ENST00000531709 PRR33A8MZF0 331 aa9.38□□□□□ -0.91
NXF1-211ENST00000531709 LINC00869P0C866 280 aa9.38□□□□□ -0.91
NXF1-211ENST00000531709 SUB1P53999 127 aaKnown RBP eCLIP9.38□□□□□ -0.91
NXF1-211ENST00000531709 ZNF124Q15973 351 aa9.38□□□□□ -0.91
NXF1-211ENST00000531709 ASPHD1Q5U4P2 390 aa9.38□□□□□ -0.91
NXF1-211ENST00000531709 ZCCHC24Q8N2G6 241 aaKnown RBP9.38□□□□□ -0.91
NXF1-211ENST00000531709 MDS2Q8NDY4 140 aa9.38□□□□□ -0.91
NXF1-211ENST00000531709 C5orf30Q96GV9 206 aa9.38□□□□□ -0.91
NXF1-211ENST00000531709 PARD6GQ9BYG4 376 aaPredicted RBP9.38□□□□□ -0.91
NXF1-211ENST00000531709 PIEZO2Q9H5I5 2752 aa9.38□□□□□ -0.91
NXF1-211ENST00000531709 APCSP02743 223 aa9.38□□□□□ -0.91
NXF1-211ENST00000531709 Q56UQ5 140 aa9.38□□□□□ -0.91
NXF1-211ENST00000531709 OR1B1Q8NGR6 318 aa9.38□□□□□ -0.91
NXF1-211ENST00000531709 ADTRPQ96IZ2 230 aa9.38□□□□□ -0.91
NXF1-211ENST00000531709 EAF1Q96JC9 268 aaPredicted RBP9.38□□□□□ -0.91
NXF1-211ENST00000531709 hADV38S2A0JD32 116 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 NUPR1O60356 82 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 REG1AP05451 166 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 KIR2DL2P43627 348 aaPredicted RBP9.37□□□□□ -0.91
NXF1-211ENST00000531709 FOXL1Q12952 345 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 KRTCAP3Q53RY4 240 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 ZNF355PQ9NSJ1 428 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 ZNRD1Q9P1U0 126 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 TBL2Q9Y4P3 447 aaKnown RBP9.37□□□□□ -0.91
NXF1-211ENST00000531709 ARL2-SNX15V9GYD0 113 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 SS18L1O75177 396 aaPredicted RBP9.37□□□□□ -0.91
NXF1-211ENST00000531709 LHFPL4Q7Z7J7 247 aa9.37□□□□□ -0.91
NXF1-211ENST00000531709 ZFHX2Q9C0A1 2572 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms