RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 HMX3A6NHT5 357 aa11.92□□□□□ -0.5
CCS-206ENST00000530961 NPIPB5A8MRT5 1133 aa11.92□□□□□ -0.5
CCS-206ENST00000530961 SFT2D2O95562 160 aa11.92□□□□□ -0.5
CCS-206ENST00000530961 TCRBP04435 133 aa11.92□□□□□ -0.5
CCS-206ENST00000530961 VAMP1P23763 118 aa11.92□□□□□ -0.5
CCS-206ENST00000530961 RAB25P57735 213 aa11.92□□□□□ -0.5
CCS-206ENST00000530961 PPP1R1AQ13522 171 aa11.92□□□□□ -0.5
CCS-206ENST00000530961 ZNF429Q86V71 674 aa11.92□□□□□ -0.5
CCS-206ENST00000530961 LHFPL5Q8TAF8 219 aa11.92□□□□□ -0.5
CCS-206ENST00000530961 NDUFA4L2Q9NRX3 87 aa11.92□□□□□ -0.5
CCS-206ENST00000530961 ZNF355PQ9NSJ1 428 aa11.92□□□□□ -0.5
CCS-206ENST00000530961 CACFD1Q9UGQ2 172 aa11.92□□□□□ -0.5
CCS-206ENST00000530961 SHPKQ9UHJ6 478 aa11.92□□□□□ -0.5
CCS-206ENST00000530961 FLVCR2Q9UPI3 526 aa11.92□□□□□ -0.5
CCS-206ENST00000530961 A0A0B4J293 547 aa11.91□□□□□ -0.5
CCS-206ENST00000530961 A0A1B0GW64 132 aa11.91□□□□□ -0.5
CCS-206ENST00000530961 DUXBA0A1W2PPF3 345 aa11.91□□□□□ -0.5
CCS-206ENST00000530961 A0A1W2PRX2 142 aa11.91□□□□□ -0.5
CCS-206ENST00000530961 DHFRP00374 187 aa11.91□□□□□ -0.5
CCS-206ENST00000530961 CRYGCP07315 174 aa11.91□□□□□ -0.5
CCS-206ENST00000530961 APELAP0DMC3 54 aa11.91□□□□□ -0.5
CCS-206ENST00000530961 MYOD1P15172 320 aa11.91□□□□□ -0.5
CCS-206ENST00000530961 PSMB6P28072 239 aa11.91□□□□□ -0.5
CCS-206ENST00000530961 DEFA1P59665 94 aa11.91□□□□□ -0.5
CCS-206ENST00000530961 DEFA3P59666 94 aa11.91□□□□□ -0.5
CCS-206ENST00000530961 HSPE1P61604 102 aaKnown RBP11.91□□□□□ -0.5
CCS-206ENST00000530961 IFITM3Q01628 133 aa11.91□□□□□ -0.5
CCS-206ENST00000530961 KIAA0141Q14154 515 aaPredicted RBP11.91□□□□□ -0.5
CCS-206ENST00000530961 LCNL1Q6ZST4 164 aa11.91□□□□□ -0.5
CCS-206ENST00000530961 MRPL41Q8IXM3 137 aaKnown RBP11.91□□□□□ -0.5
CCS-206ENST00000530961 ZNF491Q8N8L2 437 aa11.91□□□□□ -0.5
CCS-206ENST00000530961 LRTM2Q8N967 370 aa11.91□□□□□ -0.5
CCS-206ENST00000530961 C20orf85Q9H1P6 137 aa11.91□□□□□ -0.5
CCS-206ENST00000530961 COA4Q9NYJ1 87 aa11.91□□□□□ -0.5
CCS-206ENST00000530961 A0A0G2JLM5 398 aa11.9□□□□□ -0.5
CCS-206ENST00000530961 CGB1A6NKQ9 187 aa11.9□□□□□ -0.5
CCS-206ENST00000530961 DBX1A6NMT0 343 aa11.9□□□□□ -0.5
CCS-206ENST00000530961 NUDT19A8MXV4 375 aa11.9□□□□□ -0.5
CCS-206ENST00000530961 TRGV3P03979 118 aa11.9□□□□□ -0.5
CCS-206ENST00000530961 OR4E1P0C645 316 aa11.9□□□□□ -0.5
CCS-206ENST00000530961 TPPP2P59282 170 aa11.9□□□□□ -0.5
CCS-206ENST00000530961 SLC35G3Q8N808 338 aa11.9□□□□□ -0.5
CCS-206ENST00000530961 C4orf3Q8WVX3 66 aa11.9□□□□□ -0.5
CCS-206ENST00000530961 USMG5Q96IX5 58 aa11.9□□□□□ -0.5
CCS-206ENST00000530961 MS4A10Q96PG2 267 aa11.9□□□□□ -0.5
CCS-206ENST00000530961 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.9□□□□□ -0.5
CCS-206ENST00000530961 VWFP04275 2813 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 A0A0G2JRQ6 117 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 IGLC7A0M8Q6 106 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 C9orf170A2RU37 121 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 AREGP15514 252 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 CTRB1P17538 263 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 ANXA7P20073 488 aaKnown RBP11.89□□□□□ -0.51
CCS-206ENST00000530961 DHRS2Q13268 280 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 IZUMO4Q1ZYL8 232 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 AARDQ4LEZ3 155 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 C4orf46Q504U0 113 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 CTRB2Q6GPI1 263 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 LYZL2Q7Z4W2 148 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 LYG2Q86SG7 212 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 KLHL30-AS1Q8NEE0 82 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 ENKURQ8TC29 256 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 CASTOR1Q8WTX7 329 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 GPR146Q96CH1 333 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 PDCD10Q9BUL8 212 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 HINT2Q9BX68 163 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 NUDT15Q9NV35 164 aa11.89□□□□□ -0.51
CCS-206ENST00000530961 TRBV9A0A0B4J1U6 114 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 FAM223BA6NKX1 122 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 CYB5BO43169 146 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 DUS4LO95620 317 aaKnown RBP11.88□□□□□ -0.51
CCS-206ENST00000530961 IFNA17P01571 189 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 HLA-AP01891 365 aaKnown RBP11.88□□□□□ -0.51
CCS-206ENST00000530961 OR13C7P0DN81 318 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 DEFA4P12838 97 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 HIST1H1BP16401 226 aaKnown RBP11.88□□□□□ -0.51
CCS-206ENST00000530961 MECP2P51608 486 aaKnown RBP11.88□□□□□ -0.51
CCS-206ENST00000530961 PRCDQ00LT1 54 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 RUNX1Q01196 453 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 KLK9Q2XQG4 91 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 ANKRD55Q3KP44 614 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 NMSQ5H8A3 153 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 TREML4Q6UXN2 200 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 Q6ZRM9 215 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 FAM223AQ8IWN6 122 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 DUSP18Q8NEJ0 188 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 OR10W1Q8NGF6 305 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 OR52E5Q8NH55 327 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 COQ8AQ8NI60 647 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 PRR13Q9NZ81 148 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 KLK9Q9UKQ9 250 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 TMED3Q9Y3Q3 217 aa11.88□□□□□ -0.51
CCS-206ENST00000530961 TRAV6A0A075B6T7 132 aa11.87□□□□□ -0.51
CCS-206ENST00000530961 A0A1B0GU03 582 aa11.87□□□□□ -0.51
CCS-206ENST00000530961 C13orf42A0A1B0GVH6 325 aa11.87□□□□□ -0.51
CCS-206ENST00000530961 ST8SIA3O43173 380 aa11.87□□□□□ -0.51
CCS-206ENST00000530961 TSPAN15O95858 294 aa11.87□□□□□ -0.51
CCS-206ENST00000530961 H2AFB2P0C5Z0 115 aa11.87□□□□□ -0.51
CCS-206ENST00000530961 SULT1A3P0DMM9 295 aa11.87□□□□□ -0.51
CCS-206ENST00000530961 SULT1A4P0DMN0 295 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms