RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SNRNP70P08621 437 aaKnown RBP4.53□□□□□ -1.68
PCF11-205ENST00000530906 CT45A6P0DMU7 189 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 CT45A5P0DMU8 189 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 CT45A7P0DMV0 189 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 OR13C7P0DN81 318 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 SELLP14151 372 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 AGAP20933 346 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 LOXP28300 417 aaPredicted RBP4.53□□□□□ -1.68
PCF11-205ENST00000530906 GPX4P36969 197 aaPredicted RBP4.53□□□□□ -1.68
PCF11-205ENST00000530906 RPL29P47914 159 aaKnown RBP4.53□□□□□ -1.68
PCF11-205ENST00000530906 CDC34P49427 236 aaPredicted RBP4.53□□□□□ -1.68
PCF11-205ENST00000530906 COMPP49747 757 aaPredicted RBP4.53□□□□□ -1.68
PCF11-205ENST00000530906 SUB1P53999 127 aaKnown RBP eCLIP4.53□□□□□ -1.68
PCF11-205ENST00000530906 PRRX1P54821 245 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 DLX6P56179 175 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 ZNF726P1Q15940 193 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 HAGHQ16775 308 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 BSXQ3C1V8 233 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 ZNF672Q499Z4 452 aaPredicted RBP4.53□□□□□ -1.68
PCF11-205ENST00000530906 C2orf83Q53S99 150 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 FAM201AQ5SY85 155 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 TMEM200BQ69YZ2 307 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 TEPPQ6URK8 271 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 LCN15Q6UWW0 184 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 CYP2G1PQ6ZSU1 146 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 MUC15Q8N387 334 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 CYB561D1Q8N8Q1 229 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 OR10X1Q8NGY0 326 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 TMEM167AQ8TBQ9 72 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 RXFP4Q8TDU9 374 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 CA5BP1Q8WTZ4 195 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 NEU4Q8WWR8 484 aaPredicted RBP4.53□□□□□ -1.68
PCF11-205ENST00000530906 CCL17Q92583 94 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 FLYWCH2Q96CP2 140 aaKnown RBP4.53□□□□□ -1.68
PCF11-205ENST00000530906 SLC35E1Q96K37 410 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 RNF2Q99496 336 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 RNF5Q99942 180 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 RARRES2Q99969 163 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 COMMD5Q9GZQ3 224 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 RAB1BQ9H0U4 201 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 SH3BGRL2Q9UJC5 107 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 RALYQ9UKM9 306 aaKnown RBP4.53□□□□□ -1.68
PCF11-205ENST00000530906 WASHC3Q9Y3C0 194 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 AMMECR1Q9Y4X0 333 aaPredicted RBP4.53□□□□□ -1.68
PCF11-205ENST00000530906 LSM4Q9Y4Z0 139 aaKnown RBP4.53□□□□□ -1.68
PCF11-205ENST00000530906 OR51B2Q9Y5P1 312 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 KLF2Q9Y5W3 355 aaPredicted RBP4.53□□□□□ -1.68
PCF11-205ENST00000530906 ANKRD11Q6UB99 2663 aaPredicted RBP4.52□□□□□ -1.69
PCF11-205ENST00000530906 A0A1W2PPV4 95 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 MEX3AA1L020 520 aaKnown RBP4.52□□□□□ -1.69
PCF11-205ENST00000530906 TMEM8BA6NDV4 472 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 ZFP92A6NM28 416 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 H0YJW9 148 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 DVL1O14640 695 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 HMGB3O15347 200 aaKnown RBP4.52□□□□□ -1.69
PCF11-205ENST00000530906 OR2C1O95371 312 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 CXorf1O96002 111 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 FSHBP01225 129 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 OPN1MWP04001 364 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 OPN1MW2P0DN77 364 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 OPN1MW3P0DN78 364 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 IGHV1-8P0DP01 117 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 CD99P14209 185 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 RAB5AP20339 215 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 RND2P52198 227 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 ELLP55199 621 aaPredicted RBP4.52□□□□□ -1.69
PCF11-205ENST00000530906 RHOBP62745 196 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 RPL8P62917 257 aaKnown RBP4.52□□□□□ -1.69
PCF11-205ENST00000530906 ERHP84090 104 aaKnown RBP4.52□□□□□ -1.69
PCF11-205ENST00000530906 HOXA4Q00056 320 aaPredicted RBP4.52□□□□□ -1.69
PCF11-205ENST00000530906 PAX2Q02962 417 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 HNF4GQ14541 408 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 CDSNQ15517 529 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 HLA-DRB5Q30154 266 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 VMA21Q3ZAQ7 101 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 PRR30Q53SZ7 412 aaPredicted RBP4.52□□□□□ -1.69
PCF11-205ENST00000530906 FAM90A2PQ658T7 463 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 FAM53AQ6NSI3 398 aaPredicted RBP4.52□□□□□ -1.69
PCF11-205ENST00000530906 ACSM6Q6P461 480 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 SSX9Q7RTT3 188 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 TMEM144Q7Z5S9 345 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 TGIF2LYQ8IUE0 185 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 TGIF2LXQ8IUE1 241 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 TEX45Q8NA69 505 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 BEND2Q8NDZ0 799 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 RNASEH2CQ8TDP1 164 aaKnown RBP4.52□□□□□ -1.69
PCF11-205ENST00000530906 H1FXQ92522 213 aaKnown RBP4.52□□□□□ -1.69
PCF11-205ENST00000530906 NEUROG1Q92886 237 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 RAB24Q969Q5 203 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 ST6GALNAC6Q969X2 333 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 HIST1H2BAQ96A08 127 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 TIMD4Q96H15 378 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 HARBI1Q96MB7 349 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 NABP2Q9BQ15 211 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 SRSF8Q9BRL6 282 aaKnown RBP4.52□□□□□ -1.69
PCF11-205ENST00000530906 TCEAL7Q9BRU2 100 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 TMEM133Q9H2Q1 129 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 MIOXQ9UGB7 285 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 NAT8Q9UHE5 227 aa4.52□□□□□ -1.69
PCF11-205ENST00000530906 PUS1Q9Y606 427 aaKnown RBP eCLIP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms