RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 FAM201AQ5SY85 155 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 CLEC19AQ6UXS0 136 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 DUX3Q96PT4 197 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 C2orf88Q9BSF0 95 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 SDF2L1Q9HCN8 221 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 FBLL1A6NHQ2 334 aaKnown RBP7.13□□□□□ -1.27
CTNND1-227ENST00000530748 ERVH48-1M5A8F1 160 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 IGHV3-48P01763 117 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 LTBRP36941 435 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 PSG7Q13046 419 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 WDR82Q6UXN9 313 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 COLCA1Q6ZS62 124 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 LYZL4Q96KX0 146 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 RPP21Q9H633 154 aaKnown RBP7.13□□□□□ -1.27
CTNND1-227ENST00000530748 TNFRSF18Q9Y5U5 241 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 F11RQ9Y624 299 aaKnown RBP7.13□□□□□ -1.27
CTNND1-227ENST00000530748 EIF3GO75821 320 aaKnown RBP eCLIP7.13□□□□□ -1.27
CTNND1-227ENST00000530748 IGKV3-20P01619 116 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 UCP1P25874 307 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 CDX1P47902 265 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-227ENST00000530748 FHITP49789 147 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 TBR1Q16650 682 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 KCNS1Q96KK3 526 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 C21orf62Q9NYP8 219 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 SAA2-SAA4A0A096LPE2 208 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 SCO2A0A1W2PP80 73 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 TMEM250H0YL14 139 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 LINC00271P0C7V0 271 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 SAA2P0DJI9 122 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-227ENST00000530748 CCL1P22362 96 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 CA7P43166 264 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 ZNF497Q6ZNH5 498 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 PLPPR1Q8TBJ4 325 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 SPOCK3Q9BQ16 436 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 KLK15Q9H2R5 256 aa7.13□□□□□ -1.27
CTNND1-227ENST00000530748 ZFC3H1O60293 1989 aaKnown RBP7.13□□□□□ -1.27
CTNND1-227ENST00000530748 TRAV9-1A0A075B6T8 112 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 PROB1E7EW31 1015 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 RNASE1P07998 156 aaKnown RBP7.12□□□□□ -1.27
CTNND1-227ENST00000530748 OTX1P32242 354 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-227ENST00000530748 Q5BKY6 102 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 PRELID3AQ96N28 172 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 OTORQ9NRC9 128 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 LOC102724200A0A096LPH7 203 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-227ENST00000530748 YPEL1O60688 119 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 SCGB1A1P11684 91 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 GCSAMLQ5JQS6 135 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 TMEM183AQ8IXX5 376 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 SSC4DQ8WTU2 575 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 YPEL2Q96QA6 119 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 SDHCQ99643 169 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-227ENST00000530748 WNT10AQ9GZT5 417 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 SPRR3Q9UBC9 169 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 NYNRINQ9P2P1 1898 aaKnown RBP7.12□□□□□ -1.27
CTNND1-227ENST00000530748 UPK2O00526 184 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 NPIPB7O75200 414 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 NBEAP1P0C6P0 100 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 IFITM2Q01629 132 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 ARL6IP6Q8N6S5 226 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 OR52E5Q8NH55 327 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 ITLN2Q8WWU7 325 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-227ENST00000530748 Q9H3A6 140 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 SEMA5BQ9P283 1151 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 IGKV3OR2-268A0A0C4DH90 116 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 NBR2O15453 112 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 GPR183P32249 361 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 BIVMQ86UB2 503 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 LRTM2Q8N967 370 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 CACNG8Q8WXS5 425 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 RCC1LQ96I51 464 aaKnown RBP7.12□□□□□ -1.27
CTNND1-227ENST00000530748 S4R3C0 116 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 TRBV6-7A0A0A0MS04 114 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 GRIFINA4D1Z8 144 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 ZNF98A6NK75 572 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 LYPD3O95274 346 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 THBDP07204 575 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 SMIM13P0DJ93 91 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 SAA1P0DJI8 122 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-227ENST00000530748 TRPM6Q9BX84 2022 aa7.12□□□□□ -1.27
CTNND1-227ENST00000530748 A0A1B0GTI1 187 aa7.11□□□□□ -1.27
CTNND1-227ENST00000530748 IZUMO1RA6ND01 250 aa7.11□□□□□ -1.27
CTNND1-227ENST00000530748 C9JCJ5 164 aa7.11□□□□□ -1.27
CTNND1-227ENST00000530748 MIR17HGQ75NE6 70 aa7.11□□□□□ -1.27
CTNND1-227ENST00000530748 IGHV1-18A0A0C4DH31 117 aa7.11□□□□□ -1.27
CTNND1-227ENST00000530748 C15orf61A6NNL5 157 aa7.11□□□□□ -1.27
CTNND1-227ENST00000530748 KIAA1644Q3SXP7 199 aa7.11□□□□□ -1.27
CTNND1-227ENST00000530748 CARHSP1Q9Y2V2 147 aaKnown RBP7.11□□□□□ -1.27
CTNND1-227ENST00000530748 SHISA3A0PJX4 238 aa7.11□□□□□ -1.27
CTNND1-227ENST00000530748 FAM90A9PA6NNJ1 464 aa7.11□□□□□ -1.27
CTNND1-227ENST00000530748 Q6AWC8 147 aa7.11□□□□□ -1.27
CTNND1-227ENST00000530748 C7orf69Q9H7B7 122 aa7.11□□□□□ -1.27
CTNND1-227ENST00000530748 SCN10AQ9Y5Y9 1956 aa7.11□□□□□ -1.27
CTNND1-227ENST00000530748 MTCL1Q9Y4B5 1905 aaKnown RBP7.11□□□□□ -1.27
CTNND1-227ENST00000530748 TRAV24A0A0B4J272 114 aa7.11□□□□□ -1.27
CTNND1-227ENST00000530748 PLP1P60201 277 aa7.11□□□□□ -1.27
CTNND1-227ENST00000530748 ZNF837Q96EG3 531 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-227ENST00000530748 H3BRM9 83 aa7.11□□□□□ -1.27
CTNND1-227ENST00000530748 CSRP1P21291 193 aaKnown RBP7.11□□□□□ -1.27
CTNND1-227ENST00000530748 ZFP36L1Q07352 338 aaKnown RBP7.11□□□□□ -1.27
CTNND1-227ENST00000530748 PVRIGQ6DKI7 326 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms