RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 SAPCD1Q5SSQ6 148 aa13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 RTN4RL2Q86UN3 420 aa13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 LEAP2Q969E1 77 aa13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 PRDM13Q9H4Q3 707 aa13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 LTBP1Q14766 1721 aa13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 NYNRINQ9P2P1 1898 aaKnown RBP13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 LINC00271P0C7V0 271 aa13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 TNFSF10P50591 281 aa13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 C17orf98A8MV24 154 aa13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 CCL20P78556 96 aa13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 TMEM136Q6ZRR5 245 aa13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 HIST1H2BLQ99880 126 aa13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 TMEM242Q9NWH2 141 aa13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 NPIPB11E5RHQ5 1161 aa13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 ARF6P62330 175 aa13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 PDCD11Q14690 1871 aaKnown RBP13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 LCTP09848 1927 aa13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 TRBV24-1A0A075B6N3 115 aa13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 A1L4Q6 167 aa13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 SERF1AO75920 110 aa13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 SRSF7Q16629 238 aaKnown RBP eCLIP13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 LHFPL1Q86WI0 220 aa13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 FLVCR1-AS1Q8TAF5 88 aa13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 WFDC1Q9HC57 220 aa13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 TMEM106BQ9NUM4 274 aa13.03□□□□□ -0.32
PCDHA4-203ENST00000530339 RTTNQ86VV8 2226 aa13.02□□□□□ -0.32
PCDHA4-203ENST00000530339 IGKV3-7A0A075B6H7 116 aa13.02□□□□□ -0.32
PCDHA4-203ENST00000530339 IQCF6A8MYZ5 107 aa13.02□□□□□ -0.32
PCDHA4-203ENST00000530339 NPIPB6E9PJ23 425 aa13.02□□□□□ -0.32
PCDHA4-203ENST00000530339 CSRP1P21291 193 aaKnown RBP13.02□□□□□ -0.32
PCDHA4-203ENST00000530339 FCGR2BP31994 310 aaPredicted RBP13.02□□□□□ -0.32
PCDHA4-203ENST00000530339 TBR1Q16650 682 aa13.02□□□□□ -0.32
PCDHA4-203ENST00000530339 CACNG8Q8WXS5 425 aa13.02□□□□□ -0.32
PCDHA4-203ENST00000530339 IGHV1-69-2A0A0G2JMI3 117 aa13.02□□□□□ -0.33
PCDHA4-203ENST00000530339 PF4V1P10720 104 aa13.02□□□□□ -0.33
PCDHA4-203ENST00000530339 HIST3H2BBQ8N257 126 aa13.02□□□□□ -0.33
PCDHA4-203ENST00000530339 OR4D5Q8NGN0 318 aa13.02□□□□□ -0.33
PCDHA4-203ENST00000530339 ZNF324BQ6AW86 544 aaPredicted RBP13.02□□□□□ -0.33
PCDHA4-203ENST00000530339 UNQ5815/PRO19632Q6UWF5 114 aa13.02□□□□□ -0.33
PCDHA4-203ENST00000530339 GOLT1AQ6ZVE7 132 aa13.02□□□□□ -0.33
PCDHA4-203ENST00000530339 COPS9Q8WXC6 57 aa13.02□□□□□ -0.33
PCDHA4-203ENST00000530339 VWCEQ96DN2 955 aa13.02□□□□□ -0.33
PCDHA4-203ENST00000530339 A0A0A6YYD4 124 aa13.02□□□□□ -0.33
PCDHA4-203ENST00000530339 A0A1B0GW15 77 aa13.02□□□□□ -0.33
PCDHA4-203ENST00000530339 EFEMP2O95967 443 aa13.02□□□□□ -0.33
PCDHA4-203ENST00000530339 RRN3P1Q2M238 152 aa13.02□□□□□ -0.33
PCDHA4-203ENST00000530339 LAMTOR2Q9Y2Q5 125 aa13.02□□□□□ -0.33
PCDHA4-203ENST00000530339 CHD5Q8TDI0 1954 aa13.01□□□□□ -0.33
PCDHA4-203ENST00000530339 F11RQ9Y624 299 aaKnown RBP13.01□□□□□ -0.33
PCDHA4-203ENST00000530339 IGKV1D-13A0A0B4J2D9 117 aa13.01□□□□□ -0.33
PCDHA4-203ENST00000530339 NUDT3O95989 172 aa13.01□□□□□ -0.33
PCDHA4-203ENST00000530339 IGKV1-13P0DP09 117 aa13.01□□□□□ -0.33
PCDHA4-203ENST00000530339 FAM106AQ4KMX7 169 aa13.01□□□□□ -0.33
PCDHA4-203ENST00000530339 RPL39P5Q59GN2 51 aa13.01□□□□□ -0.33
PCDHA4-203ENST00000530339 HILPDAQ9Y5L2 63 aa13.01□□□□□ -0.33
PCDHA4-203ENST00000530339 NIT1Q86X76 327 aa13.01□□□□□ -0.33
PCDHA4-203ENST00000530339 H3BTX0 84 aa13.01□□□□□ -0.33
PCDHA4-203ENST00000530339 COX6CP09669 75 aa13.01□□□□□ -0.33
PCDHA4-203ENST00000530339 IGFBP2P18065 325 aa13.01□□□□□ -0.33
PCDHA4-203ENST00000530339 LINC00305Q7Z4B0 112 aa13.01□□□□□ -0.33
PCDHA4-203ENST00000530339 MBD3L1Q8WWY6 194 aa13.01□□□□□ -0.33
PCDHA4-203ENST00000530339 IFI27L2Q9H2X8 130 aa13.01□□□□□ -0.33
PCDHA4-203ENST00000530339 NRN1Q9NPD7 142 aa13.01□□□□□ -0.33
PCDHA4-203ENST00000530339 LOC105371242A0A075B767 164 aa13□□□□□ -0.33
PCDHA4-203ENST00000530339 PF4P02776 101 aa13□□□□□ -0.33
PCDHA4-203ENST00000530339 APOBEC3AP31941 199 aaPredicted RBP13□□□□□ -0.33
PCDHA4-203ENST00000530339 RNFT1Q5M7Z0 435 aa13□□□□□ -0.33
PCDHA4-203ENST00000530339 ANOS1P23352 680 aa13□□□□□ -0.33
PCDHA4-203ENST00000530339 RNASEH2CQ8TDP1 164 aaKnown RBP13□□□□□ -0.33
PCDHA4-203ENST00000530339 EEF1AKMT3Q96AZ1 226 aa13□□□□□ -0.33
PCDHA4-203ENST00000530339 A0A1B0GW64 132 aa13□□□□□ -0.33
PCDHA4-203ENST00000530339 LDLRAD4O15165 306 aa13□□□□□ -0.33
PCDHA4-203ENST00000530339 TSPOP30536 169 aa13□□□□□ -0.33
PCDHA4-203ENST00000530339 SUPT4H1P63272 117 aaKnown RBP13□□□□□ -0.33
PCDHA4-203ENST00000530339 TM4SF20Q53R12 229 aa13□□□□□ -0.33
PCDHA4-203ENST00000530339 ZNF256Q9Y2P7 627 aaPredicted RBP13□□□□□ -0.33
PCDHA4-203ENST00000530339 FAM90A9PA6NNJ1 464 aa13□□□□□ -0.33
PCDHA4-203ENST00000530339 GDF9O60383 454 aa13□□□□□ -0.33
PCDHA4-203ENST00000530339 ZNF124Q15973 351 aa13□□□□□ -0.33
PCDHA4-203ENST00000530339 DOCK4Q8N1I0 1966 aa13□□□□□ -0.33
PCDHA4-203ENST00000530339 IGKV1D-8A0A087WSZ0 117 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 PEX7O00628 323 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 HTN1P15515 57 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 ZNF414Q96IQ9 312 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 MTCL1Q9Y4B5 1905 aaKnown RBP12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 NBEAP1P0C6P0 100 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 ZNF837Q96EG3 531 aaPredicted RBP12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 JMJD8Q96S16 334 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 CACNA1DQ01668 2161 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 GBF1Q92538 1859 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 CXCL1P09341 107 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 RFPL3SP0C7P2 107 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 SMIM13P0DJ93 91 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 ATP5G2Q06055 141 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 WFDC3Q8IUB2 231 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 FAM19A2Q8N3H0 131 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 LYZL4Q96KX0 146 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 ZNF319Q9P2F9 582 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 C7orf71A4D174 169 aa12.99□□□□□ -0.33
PCDHA4-203ENST00000530339 IZUMO1RA6ND01 250 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms