RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 ZNF502Q8TBZ5 544 aa11.87□□□□□ -0.51
COL16A1-216ENST00000529928 SLC25A46Q96AG3 418 aa11.87□□□□□ -0.51
COL16A1-216ENST00000529928 ZNF436Q9C0F3 470 aaPredicted RBP11.87□□□□□ -0.51
COL16A1-216ENST00000529928 MAP6D1Q9H9H5 199 aa11.87□□□□□ -0.51
COL16A1-216ENST00000529928 IGHV3-35A0A0C4DH35 117 aa11.86□□□□□ -0.51
COL16A1-216ENST00000529928 OR4C46A6NHA9 309 aa11.86□□□□□ -0.51
COL16A1-216ENST00000529928 PTHLHP12272 177 aa11.86□□□□□ -0.51
COL16A1-216ENST00000529928 NCS1P62166 190 aa11.86□□□□□ -0.51
COL16A1-216ENST00000529928 EIF4EBP1Q13541 118 aaPredicted RBP11.86□□□□□ -0.51
COL16A1-216ENST00000529928 SSX9Q7RTT3 188 aa11.86□□□□□ -0.51
COL16A1-216ENST00000529928 TMEM190Q8WZ59 177 aa11.86□□□□□ -0.51
COL16A1-216ENST00000529928 C6orf62Q9GZU0 229 aaPredicted RBP11.86□□□□□ -0.51
COL16A1-216ENST00000529928 DAZ1Q9NQZ3 744 aaKnown RBP11.86□□□□□ -0.51
COL16A1-216ENST00000529928 THYN1Q9P016 225 aa11.86□□□□□ -0.51
COL16A1-216ENST00000529928 TGOLN2O43493 480 aa11.85□□□□□ -0.51
COL16A1-216ENST00000529928 XRCC3O43542 346 aa11.85□□□□□ -0.51
COL16A1-216ENST00000529928 IFNA4P05014 189 aa11.85□□□□□ -0.51
COL16A1-216ENST00000529928 HLA-GP17693 338 aa11.85□□□□□ -0.51
COL16A1-216ENST00000529928 PTBP1P26599 531 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL16A1-216ENST00000529928 FCGR2BP31994 310 aaPredicted RBP11.85□□□□□ -0.51
COL16A1-216ENST00000529928 TCTAP57738 103 aa11.85□□□□□ -0.51
COL16A1-216ENST00000529928 RBMS2Q15434 407 aaKnown RBP11.85□□□□□ -0.51
COL16A1-216ENST00000529928 UBE2NLQ5JXB2 153 aa11.85□□□□□ -0.51
COL16A1-216ENST00000529928 HOGA1Q86XE5 327 aa11.85□□□□□ -0.51
COL16A1-216ENST00000529928 BEST4Q8NFU0 473 aa11.85□□□□□ -0.51
COL16A1-216ENST00000529928 OR4A5Q8NH83 315 aa11.85□□□□□ -0.51
COL16A1-216ENST00000529928 AIFM2Q9BRQ8 373 aa11.85□□□□□ -0.51
COL16A1-216ENST00000529928 DIABLOQ9NR28 239 aa11.85□□□□□ -0.51
COL16A1-216ENST00000529928 BET1LQ9NYM9 111 aa11.85□□□□□ -0.51
COL16A1-216ENST00000529928 CGB1A6NKQ9 187 aa11.84□□□□□ -0.51
COL16A1-216ENST00000529928 S1PR2O95136 353 aa11.84□□□□□ -0.51
COL16A1-216ENST00000529928 BRWD1-AS2P59051 145 aa11.84□□□□□ -0.51
COL16A1-216ENST00000529928 VBP1P61758 197 aa11.84□□□□□ -0.51
COL16A1-216ENST00000529928 PRR20EP86478 221 aa11.84□□□□□ -0.51
COL16A1-216ENST00000529928 PRR20CP86479 221 aa11.84□□□□□ -0.51
COL16A1-216ENST00000529928 PRR20DP86480 221 aa11.84□□□□□ -0.51
COL16A1-216ENST00000529928 PRR20BP86481 221 aa11.84□□□□□ -0.51
COL16A1-216ENST00000529928 PRR20AP86496 221 aa11.84□□□□□ -0.51
COL16A1-216ENST00000529928 ZNF66Q6ZN08 573 aa11.84□□□□□ -0.51
COL16A1-216ENST00000529928 MFSD4AQ8N468 514 aa11.84□□□□□ -0.51
COL16A1-216ENST00000529928 C11orf45Q8TAV5 145 aa11.84□□□□□ -0.51
COL16A1-216ENST00000529928 RARRES2Q99969 163 aa11.84□□□□□ -0.51
COL16A1-216ENST00000529928 C11orf68Q9H3H3 251 aaKnown RBP11.84□□□□□ -0.51
COL16A1-216ENST00000529928 TAS2R8Q9NYW2 309 aa11.84□□□□□ -0.51
COL16A1-216ENST00000529928 ANAPC10Q9UM13 185 aa11.84□□□□□ -0.51
COL16A1-216ENST00000529928 CYB5BO43169 146 aa11.83□□□□□ -0.52
COL16A1-216ENST00000529928 OR2B8PP59922 312 aa11.83□□□□□ -0.52
COL16A1-216ENST00000529928 NANOS2P60321 138 aaKnown RBP11.83□□□□□ -0.52
COL16A1-216ENST00000529928 CTF1Q16619 201 aa11.83□□□□□ -0.52
COL16A1-216ENST00000529928 SAMD12Q8N8I0 201 aa11.83□□□□□ -0.52
COL16A1-216ENST00000529928 OR5B3Q8NH48 314 aa11.83□□□□□ -0.52
COL16A1-216ENST00000529928 VN1R17PQ8TDU5 208 aa11.83□□□□□ -0.52
COL16A1-216ENST00000529928 C2CD4CQ8TF44 421 aa11.83□□□□□ -0.52
COL16A1-216ENST00000529928 SRSF8Q9BRL6 282 aaKnown RBP11.83□□□□□ -0.52
COL16A1-216ENST00000529928 NAA50Q9GZZ1 169 aaKnown RBP11.83□□□□□ -0.52
COL16A1-216ENST00000529928 CSTL1Q9H114 145 aa11.83□□□□□ -0.52
COL16A1-216ENST00000529928 HRASLSQ9HDD0 168 aa11.83□□□□□ -0.52
COL16A1-216ENST00000529928 FBXL17Q9UF56 701 aa11.83□□□□□ -0.52
COL16A1-216ENST00000529928 IGLC7A0M8Q6 106 aa11.82□□□□□ -0.52
COL16A1-216ENST00000529928 RPA2P15927 270 aa11.82□□□□□ -0.52
COL16A1-216ENST00000529928 CD300LFQ8TDQ1 290 aa11.82□□□□□ -0.52
COL16A1-216ENST00000529928 S100A16Q96FQ6 103 aaKnown RBP11.82□□□□□ -0.52
COL16A1-216ENST00000529928 BSCL2Q96G97 398 aaPredicted RBP11.82□□□□□ -0.52
COL16A1-216ENST00000529928 COMMD5Q9GZQ3 224 aa11.82□□□□□ -0.52
COL16A1-216ENST00000529928 PCLOQ9Y6V0 5065 aa11.81□□□□□ -0.52
COL16A1-216ENST00000529928 OR2T8A6NH00 312 aa11.81□□□□□ -0.52
COL16A1-216ENST00000529928 MPTX1A8MV57 137 aa11.81□□□□□ -0.52
COL16A1-216ENST00000529928 NDUFA4O00483 81 aa11.81□□□□□ -0.52
COL16A1-216ENST00000529928 GABARAPO95166 117 aa11.81□□□□□ -0.52
COL16A1-216ENST00000529928 EIF4EP06730 217 aaKnown RBP11.81□□□□□ -0.52
COL16A1-216ENST00000529928 FCGR2CP31995 323 aa11.81□□□□□ -0.52
COL16A1-216ENST00000529928 TAS2R20P59543 309 aa11.81□□□□□ -0.52
COL16A1-216ENST00000529928 SPSB3Q6PJ21 355 aa11.81□□□□□ -0.52
COL16A1-216ENST00000529928 APRG1Q8IVJ8 170 aa11.81□□□□□ -0.52
COL16A1-216ENST00000529928 HECTD4Q9Y4D8 3996 aa11.81□□□□□ -0.52
COL16A1-216ENST00000529928 MEIS3P1A6NDR6 274 aa11.8□□□□□ -0.52
COL16A1-216ENST00000529928 K7EMT4 169 aa11.8□□□□□ -0.52
COL16A1-216ENST00000529928 FCER2P06734 321 aa11.8□□□□□ -0.52
COL16A1-216ENST00000529928 CTSDP07339 412 aaPredicted RBP11.8□□□□□ -0.52
COL16A1-216ENST00000529928 NAT1P18440 290 aa11.8□□□□□ -0.52
COL16A1-216ENST00000529928 CBX5P45973 191 aa11.8□□□□□ -0.52
COL16A1-216ENST00000529928 CMC4P56277 68 aaPredicted RBP11.8□□□□□ -0.52
COL16A1-216ENST00000529928 ARPC4P59998 168 aa11.8□□□□□ -0.52
COL16A1-216ENST00000529928 MSMO1Q15800 293 aa11.8□□□□□ -0.52
COL16A1-216ENST00000529928 TMEM69Q5SWH9 247 aa11.8□□□□□ -0.52
COL16A1-216ENST00000529928 GDPD1Q8N9F7 314 aa11.8□□□□□ -0.52
COL16A1-216ENST00000529928 OR5AP2Q8NGF4 316 aa11.8□□□□□ -0.52
COL16A1-216ENST00000529928 OR11H2Q8NH07 326 aa11.8□□□□□ -0.52
COL16A1-216ENST00000529928 GPHA2Q96T91 129 aa11.8□□□□□ -0.52
COL16A1-216ENST00000529928 ATP6V0BQ99437 205 aa11.8□□□□□ -0.52
COL16A1-216ENST00000529928 C20orf24Q9BUV8 137 aa11.8□□□□□ -0.52
COL16A1-216ENST00000529928 RBFOX2O43251 390 aaKnown RBP eCLIP11.79□□□□□ -0.52
COL16A1-216ENST00000529928 PPYP01298 95 aa11.79□□□□□ -0.52
COL16A1-216ENST00000529928 APOA1P02647 267 aa11.79□□□□□ -0.52
COL16A1-216ENST00000529928 FGF2P09038 288 aa11.79□□□□□ -0.52
COL16A1-216ENST00000529928 ADMP35318 185 aa11.79□□□□□ -0.52
COL16A1-216ENST00000529928 ALDH3B2P48448 385 aa11.79□□□□□ -0.52
COL16A1-216ENST00000529928 TAS2R31P59538 309 aa11.79□□□□□ -0.52
COL16A1-216ENST00000529928 THOC7Q6I9Y2 204 aaKnown RBP11.79□□□□□ -0.52
COL16A1-216ENST00000529928 SPAG16Q8N0X2 631 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms