RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 BTBD17A6NE02 478 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 HTR1DP28221 377 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 SRSF1Q07955 248 aaKnown RBP eCLIP12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 BSXQ3C1V8 233 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 TREML4Q6UXN2 200 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 RCC1LQ96I51 464 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 UNKLQ9H9P5 680 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 DPM3Q9P2X0 92 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 KPTNQ9Y664 436 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 PLXNB1O43157 2135 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 TRAV1-1A0A0B4J248 108 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 SMCO3A2RU48 225 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 CGB1A6NKQ9 187 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 F8W036 122 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 IGKV1D-33P01593 117 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 IGKV1-33P01594 117 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 CNTFRP26992 372 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 PDLIM4P50479 330 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 RAB2AP61019 212 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 C10orf55Q5SWW7 151 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 SSX7Q7RTT5 188 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 VMO1Q7Z5L0 202 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 SEC11CQ9BY50 192 aa12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 EIF5A2Q9GZV4 153 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 CARHSP1Q9Y2V2 147 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-213ENST00000529611 INS-IGF2F8WCM5 200 aa12.42□□□□□ -0.42
CCDC90B-213ENST00000529611 HBE1P02100 147 aa12.42□□□□□ -0.42
CCDC90B-213ENST00000529611 SFTA3P0C7M3 94 aa12.42□□□□□ -0.42
CCDC90B-213ENST00000529611 DEFA5Q01523 94 aa12.42□□□□□ -0.42
CCDC90B-213ENST00000529611 C2orf83Q53S99 150 aa12.42□□□□□ -0.42
CCDC90B-213ENST00000529611 ARSJQ5FYB0 599 aaPredicted RBP12.42□□□□□ -0.42
CCDC90B-213ENST00000529611 ATRAIDQ6UW56 229 aa12.42□□□□□ -0.42
CCDC90B-213ENST00000529611 RPP25LQ8N5L8 163 aaKnown RBP12.42□□□□□ -0.42
CCDC90B-213ENST00000529611 ZNF709Q8N972 641 aa12.42□□□□□ -0.42
CCDC90B-213ENST00000529611 TEX45Q8NA69 505 aa12.42□□□□□ -0.42
CCDC90B-213ENST00000529611 PBDC1Q9BVG4 233 aa12.42□□□□□ -0.42
CCDC90B-213ENST00000529611 KIAA1456Q9P272 454 aa12.42□□□□□ -0.42
CCDC90B-213ENST00000529611 UTP20O75691 2785 aaKnown RBP12.42□□□□□ -0.42
CCDC90B-213ENST00000529611 NAV3Q8IVL0 2385 aa12.42□□□□□ -0.42
CCDC90B-213ENST00000529611 IGHV2-70DA0A0C4DH43 119 aa12.41□□□□□ -0.42
CCDC90B-213ENST00000529611 A0A1B0GW64 132 aa12.41□□□□□ -0.42
CCDC90B-213ENST00000529611 TIMM23O14925 209 aa12.41□□□□□ -0.42
CCDC90B-213ENST00000529611 CRYGBP07316 175 aa12.41□□□□□ -0.42
CCDC90B-213ENST00000529611 RNASE2P10153 161 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-213ENST00000529611 PEA15Q15121 130 aa12.41□□□□□ -0.42
CCDC90B-213ENST00000529611 LHFPL4Q7Z7J7 247 aa12.41□□□□□ -0.42
CCDC90B-213ENST00000529611 MBD3L1Q8WWY6 194 aa12.41□□□□□ -0.42
CCDC90B-213ENST00000529611 C1orf159Q96HA4 380 aa12.41□□□□□ -0.42
CCDC90B-213ENST00000529611 SIRPDQ9H106 197 aa12.41□□□□□ -0.42
CCDC90B-213ENST00000529611 C17orf112F2Z3M2 114 aa12.41□□□□□ -0.42
CCDC90B-213ENST00000529611 MPDU1O75352 247 aa12.41□□□□□ -0.42
CCDC90B-213ENST00000529611 CEACAM3P40198 252 aa12.41□□□□□ -0.42
CCDC90B-213ENST00000529611 ATP5IP56385 69 aaPredicted RBP12.41□□□□□ -0.42
CCDC90B-213ENST00000529611 PSG5Q15238 335 aa12.41□□□□□ -0.42
CCDC90B-213ENST00000529611 GUCA2BQ16661 112 aa12.41□□□□□ -0.42
CCDC90B-213ENST00000529611 FFAR4Q5NUL3 377 aa12.41□□□□□ -0.42
CCDC90B-213ENST00000529611 LSM4Q9Y4Z0 139 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-213ENST00000529611 VPS13CQ709C8 3753 aa12.4□□□□□ -0.42
CCDC90B-213ENST00000529611 A0A1W2PN81 502 aa12.4□□□□□ -0.42
CCDC90B-213ENST00000529611 A0A1W2PRD5 423 aa12.4□□□□□ -0.42
CCDC90B-213ENST00000529611 A0A1W2PRF3 423 aa12.4□□□□□ -0.42
CCDC90B-213ENST00000529611 A0A1W2PRM7 423 aa12.4□□□□□ -0.42
CCDC90B-213ENST00000529611 HOXB4P17483 251 aaPredicted RBP12.4□□□□□ -0.42
CCDC90B-213ENST00000529611 CHRNA7P36544 502 aa12.4□□□□□ -0.42
CCDC90B-213ENST00000529611 PPT1P50897 306 aa12.4□□□□□ -0.42
CCDC90B-213ENST00000529611 WT1-ASQ06250 92 aa12.4□□□□□ -0.42
CCDC90B-213ENST00000529611 PRSS8Q16651 343 aa12.4□□□□□ -0.42
CCDC90B-213ENST00000529611 LCN15Q6UWW0 184 aa12.4□□□□□ -0.42
CCDC90B-213ENST00000529611 MGST2Q99735 147 aa12.4□□□□□ -0.42
CCDC90B-213ENST00000529611 RARRES2Q99969 163 aa12.4□□□□□ -0.42
CCDC90B-213ENST00000529611 NPVFQ9HCQ7 196 aa12.4□□□□□ -0.42
CCDC90B-213ENST00000529611 SIGLEC9Q9Y336 463 aa12.4□□□□□ -0.42
CCDC90B-213ENST00000529611 HILPDAQ9Y5L2 63 aa12.4□□□□□ -0.42
CCDC90B-213ENST00000529611 VENTXO95231 258 aa12.39□□□□□ -0.43
CCDC90B-213ENST00000529611 MBP02144 154 aa12.39□□□□□ -0.43
CCDC90B-213ENST00000529611 ERHP84090 104 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-213ENST00000529611 HABP2Q14520 560 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-213ENST00000529611 MMD2Q8IY49 270 aa12.39□□□□□ -0.43
CCDC90B-213ENST00000529611 CFHR4Q92496 578 aa12.39□□□□□ -0.43
CCDC90B-213ENST00000529611 CRYBG3Q68DQ2 2970 aa12.39□□□□□ -0.43
CCDC90B-213ENST00000529611 RBFOX3A6NFN3 312 aa12.39□□□□□ -0.43
CCDC90B-213ENST00000529611 FNDC10F2Z333 226 aa12.39□□□□□ -0.43
CCDC90B-213ENST00000529611 PAX6P26367 422 aa12.39□□□□□ -0.43
CCDC90B-213ENST00000529611 ZNF787Q6DD87 383 aa12.39□□□□□ -0.43
CCDC90B-213ENST00000529611 SVBPQ8N300 66 aa12.39□□□□□ -0.43
CCDC90B-213ENST00000529611 RNF5Q99942 180 aa12.39□□□□□ -0.43
CCDC90B-213ENST00000529611 GGTLC1Q9BX51 225 aa12.39□□□□□ -0.43
CCDC90B-213ENST00000529611 SVEP1Q4LDE5 3571 aa12.38□□□□□ -0.43
CCDC90B-213ENST00000529611 MAP1LC3B2A6NCE7 125 aa12.38□□□□□ -0.43
CCDC90B-213ENST00000529611 EIF3GO75821 320 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCDC90B-213ENST00000529611 M6PRP20645 277 aa12.38□□□□□ -0.43
CCDC90B-213ENST00000529611 FGF8P55075 233 aaPredicted RBP12.38□□□□□ -0.43
CCDC90B-213ENST00000529611 OR10G4Q8NGN3 311 aa12.38□□□□□ -0.43
CCDC90B-213ENST00000529611 OR10G9Q8NGN4 311 aa12.38□□□□□ -0.43
CCDC90B-213ENST00000529611 OR10G7Q8NGN6 311 aa12.38□□□□□ -0.43
CCDC90B-213ENST00000529611 FAM168AQ92567 244 aa12.38□□□□□ -0.43
CCDC90B-213ENST00000529611 MAP1LC3BQ9GZQ8 125 aa12.38□□□□□ -0.43
CCDC90B-213ENST00000529611 METTL1Q9UBP6 276 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-213ENST00000529611 FOXH1O75593 365 aa12.38□□□□□ -0.43
CCDC90B-213ENST00000529611 OPRK1P41145 380 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms