RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	CCL13	Q99616	98 aa		11.96	□□□□□ -0.5
NR1H3-231	ENST00000529540	SLC25A10	Q9UBX3	287 aa	Predicted RBP	11.96	□□□□□ -0.5
NR1H3-231	ENST00000529540	HSPB7	Q9UBY9	170 aa		11.96	□□□□□ -0.5
NR1H3-231	ENST00000529540	PTPN13	Q12923	2485 aa		11.95	□□□□□ -0.5
NR1H3-231	ENST00000529540	TMEM30CP	A0ZSE6	113 aa		11.95	□□□□□ -0.5
NR1H3-231	ENST00000529540	PSPN	O60542	156 aa		11.95	□□□□□ -0.5
NR1H3-231	ENST00000529540		P0C879	139 aa		11.95	□□□□□ -0.5
NR1H3-231	ENST00000529540	MDK	P21741	143 aa	Predicted RBP	11.95	□□□□□ -0.5
NR1H3-231	ENST00000529540	OR3A1	P47881	315 aa		11.95	□□□□□ -0.5
NR1H3-231	ENST00000529540	CEBPD	P49716	269 aa	Predicted RBP	11.95	□□□□□ -0.5
NR1H3-231	ENST00000529540	HOXA4	Q00056	320 aa	Predicted RBP	11.95	□□□□□ -0.5
NR1H3-231	ENST00000529540	CLEC12B	Q2HXU8	276 aa		11.95	□□□□□ -0.5
NR1H3-231	ENST00000529540	SLC35E4	Q6ICL7	350 aa		11.95	□□□□□ -0.5
NR1H3-231	ENST00000529540	ACSM6	Q6P461	480 aa		11.95	□□□□□ -0.5
NR1H3-231	ENST00000529540	ZNF497	Q6ZNH5	498 aa		11.95	□□□□□ -0.5
NR1H3-231	ENST00000529540	ZBTB34	Q8NCN2	500 aa		11.95	□□□□□ -0.5
NR1H3-231	ENST00000529540	ZNRF1	Q8ND25	227 aa		11.95	□□□□□ -0.5
NR1H3-231	ENST00000529540	BPESC1	Q9GZL8	116 aa		11.95	□□□□□ -0.5
NR1H3-231	ENST00000529540	PARL	Q9H300	379 aa		11.95	□□□□□ -0.5
NR1H3-231	ENST00000529540	PATZ1	Q9HBE1	687 aa	Known RBP	11.95	□□□□□ -0.5
NR1H3-231	ENST00000529540	RAB9B	Q9NP90	201 aa		11.95	□□□□□ -0.5
NR1H3-231	ENST00000529540	TNFRSF9	Q07011	255 aa		11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	MSMO1	Q15800	293 aa		11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	TRAT1	Q6PIZ9	186 aa		11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	BTF3L4	Q96K17	158 aa		11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	MBNL3	Q9NUK0	354 aa	Known RBP	11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	LRBA	P50851	2863 aa		11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	USF3	Q68DE3	2245 aa		11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	VWC2L	B2RUY7	222 aa		11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	NDUFB7	P17568	137 aa		11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	LCN2	P80188	198 aa		11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	VWC2	Q2TAL6	325 aa		11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	ZNF66	Q6ZN08	573 aa		11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	ZNF664	Q8N3J9	261 aa		11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	DRAM1	Q8N682	238 aa		11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	FAM216B	Q8N7L0	139 aa		11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	OR2T10	Q8NGZ9	312 aa		11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	RPUSD4	Q96CM3	377 aa	Known RBP	11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	OR6C3	Q9NZP0	311 aa		11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	CLN8	Q9UBY8	286 aa		11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	KCNS2	Q9ULS6	477 aa		11.94	□□□□□ -0.5
NR1H3-231	ENST00000529540	PMS2P5	A8MQ11	134 aa		11.93	□□□□□ -0.5
NR1H3-231	ENST00000529540	SELL	P14151	372 aa		11.93	□□□□□ -0.5
NR1H3-231	ENST00000529540	CD99	P14209	185 aa		11.93	□□□□□ -0.5
NR1H3-231	ENST00000529540	SPCS3	P61009	180 aa		11.93	□□□□□ -0.5
NR1H3-231	ENST00000529540	MEF2C	Q06413	473 aa	Predicted RBP	11.93	□□□□□ -0.5
NR1H3-231	ENST00000529540	FGFRL1	Q8N441	504 aa		11.93	□□□□□ -0.5
NR1H3-231	ENST00000529540	IL1F10	Q8WWZ1	152 aa		11.93	□□□□□ -0.5
NR1H3-231	ENST00000529540	TMEM18	Q96B42	140 aa		11.93	□□□□□ -0.5
NR1H3-231	ENST00000529540	FOXC2	Q99958	501 aa		11.93	□□□□□ -0.5
NR1H3-231	ENST00000529540	PCGF1	Q9BSM1	259 aa		11.93	□□□□□ -0.5
NR1H3-231	ENST00000529540	METRN	Q9UJH8	293 aa		11.93	□□□□□ -0.5
NR1H3-231	ENST00000529540	GNB2	P62879	340 aa		11.92	□□□□□ -0.5
NR1H3-231	ENST00000529540	SSX2	Q16385	188 aa		11.92	□□□□□ -0.5
NR1H3-231	ENST00000529540	TMEM249	Q2WGJ8	235 aa		11.92	□□□□□ -0.5
NR1H3-231	ENST00000529540		Q5PR19	223 aa		11.92	□□□□□ -0.5
NR1H3-231	ENST00000529540	CRYBG3	Q68DQ2	2970 aa		11.92	□□□□□ -0.5
NR1H3-231	ENST00000529540	KCNIP4	Q6PIL6	250 aa		11.92	□□□□□ -0.5
NR1H3-231	ENST00000529540	NECAP1	Q8NC96	275 aa		11.92	□□□□□ -0.5
NR1H3-231	ENST00000529540	OR10G9	Q8NGN4	311 aa		11.92	□□□□□ -0.5
NR1H3-231	ENST00000529540	OR10G7	Q8NGN6	311 aa		11.92	□□□□□ -0.5
NR1H3-231	ENST00000529540	IMMP2L	Q96T52	175 aa		11.92	□□□□□ -0.5
NR1H3-231	ENST00000529540	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.92	□□□□□ -0.5
NR1H3-231	ENST00000529540	SLC25A22	Q9H936	323 aa		11.92	□□□□□ -0.5
NR1H3-231	ENST00000529540	KCNIP1	Q9NZI2	227 aa		11.92	□□□□□ -0.5
NR1H3-231	ENST00000529540	TRAPPC2L	Q9UL33	140 aa		11.92	□□□□□ -0.5
NR1H3-231	ENST00000529540	hADV38S2	A0JD32	116 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	EDDM3B	P56851	147 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	AES	Q08117	197 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	EDDM3A	Q14507	147 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	OR8G2P	Q6IF36	304 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	LYPD2	Q6UXB3	125 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	OR4F5	Q8NH21	305 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	MISP3	Q96FF7	219 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	OR4F4	Q96R69	305 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	ELOVL1	Q9BW60	279 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	CTSZ	Q9UBR2	303 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	RBM7	Q9Y580	266 aa	Known RBP	11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	TRGV10	A0A0A0MS01	117 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	ODAM	A1E959	279 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	SOX15	O60248	233 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	ZNF16	P17020	682 aa	Predicted RBP	11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	FFAR4	Q5NUL3	377 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	ZNF645	Q8N7E2	425 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	TCTEX1D1	Q8N7M0	179 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	COQ2	Q96H96	371 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	CIB3	Q96Q77	187 aa	Predicted RBP	11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	LINC00312	Q9Y6C7	94 aa		11.91	□□□□□ -0.5
NR1H3-231	ENST00000529540	FBN2	P35556	2912 aa		11.9	□□□□□ -0.5
NR1H3-231	ENST00000529540	AKAP6	Q13023	2319 aa		11.9	□□□□□ -0.5
NR1H3-231	ENST00000529540	IGHV4-30-2	A0A087WSY4	118 aa		11.9	□□□□□ -0.5
NR1H3-231	ENST00000529540		A0A1W2PPQ1	181 aa		11.9	□□□□□ -0.5
NR1H3-231	ENST00000529540	RAB29	O14966	203 aa		11.9	□□□□□ -0.5
NR1H3-231	ENST00000529540	FOXH1	O75593	365 aa		11.9	□□□□□ -0.5
NR1H3-231	ENST00000529540	TFF1	P04155	84 aa		11.9	□□□□□ -0.5
NR1H3-231	ENST00000529540	USF1	P22415	310 aa	Predicted RBP	11.9	□□□□□ -0.5
NR1H3-231	ENST00000529540	RPL31	P62899	125 aa	Known RBP	11.9	□□□□□ -0.5
NR1H3-231	ENST00000529540	IQCJ	Q1A5X6	159 aa		11.9	□□□□□ -0.5
NR1H3-231	ENST00000529540	TMEM30B	Q3MIR4	351 aa		11.9	□□□□□ -0.5

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