RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 LIPKQ5VXJ0 399 aa13.71□□□□□ -0.21
SSRP1-204ENST00000529002 SLC25A24Q6NUK1 477 aa13.71□□□□□ -0.21
SSRP1-204ENST00000529002 BSCL2Q96G97 398 aaPredicted RBP13.71□□□□□ -0.21
SSRP1-204ENST00000529002 HSD17B10Q99714 261 aaKnown RBP13.71□□□□□ -0.21
SSRP1-204ENST00000529002 BET1LQ9NYM9 111 aa13.71□□□□□ -0.21
SSRP1-204ENST00000529002 NACAE9PAV3 2078 aa13.71□□□□□ -0.21
SSRP1-204ENST00000529002 C15orf61A6NNL5 157 aa13.7□□□□□ -0.22
SSRP1-204ENST00000529002 MRPS14O60783 128 aaKnown RBP13.7□□□□□ -0.22
SSRP1-204ENST00000529002 HRASP01112 189 aa13.7□□□□□ -0.22
SSRP1-204ENST00000529002 TALDO1P37837 337 aa13.7□□□□□ -0.22
SSRP1-204ENST00000529002 Q6ZS49 121 aa13.7□□□□□ -0.22
SSRP1-204ENST00000529002 FAM24BQ8N5W8 94 aa13.7□□□□□ -0.22
SSRP1-204ENST00000529002 MAPKAPK5-AS1Q8N8E1 139 aa13.7□□□□□ -0.22
SSRP1-204ENST00000529002 TMEM116Q8NCL8 245 aa13.7□□□□□ -0.22
SSRP1-204ENST00000529002 SCARB1Q8WTV0 552 aa13.7□□□□□ -0.22
SSRP1-204ENST00000529002 GIMAP1Q8WWP7 306 aa13.7□□□□□ -0.22
SSRP1-204ENST00000529002 THYN1Q9P016 225 aa13.7□□□□□ -0.22
SSRP1-204ENST00000529002 LSM2Q9Y333 95 aaKnown RBP13.7□□□□□ -0.22
SSRP1-204ENST00000529002 P0DMU3 169 aa13.69□□□□□ -0.22
SSRP1-204ENST00000529002 FAM231AP0DMU4 169 aa13.69□□□□□ -0.22
SSRP1-204ENST00000529002 FAM231CP0DMU5 169 aa13.69□□□□□ -0.22
SSRP1-204ENST00000529002 DEFB131AP59861 70 aa13.69□□□□□ -0.22
SSRP1-204ENST00000529002 WT1-ASQ06250 92 aa13.69□□□□□ -0.22
SSRP1-204ENST00000529002 LGALS9BQ3B8N2 356 aa13.69□□□□□ -0.22
SSRP1-204ENST00000529002 FAM90A2PQ658T7 463 aa13.69□□□□□ -0.22
SSRP1-204ENST00000529002 FKBP14Q9NWM8 211 aa13.69□□□□□ -0.22
SSRP1-204ENST00000529002 C21orf62Q9NYP8 219 aa13.69□□□□□ -0.22
SSRP1-204ENST00000529002 DEFB131BA0A096LNP1 70 aa13.68□□□□□ -0.22
SSRP1-204ENST00000529002 C15orf62A8K5M9 175 aa13.68□□□□□ -0.22
SSRP1-204ENST00000529002 UPK2O00526 184 aa13.68□□□□□ -0.22
SSRP1-204ENST00000529002 AMBPP02760 352 aa13.68□□□□□ -0.22
SSRP1-204ENST00000529002 OR13C7P0DN81 318 aa13.68□□□□□ -0.22
SSRP1-204ENST00000529002 GADD45AP24522 165 aa13.68□□□□□ -0.22
SSRP1-204ENST00000529002 CMC4P56277 68 aaPredicted RBP13.68□□□□□ -0.22
SSRP1-204ENST00000529002 C12orf74Q32Q52 190 aa13.68□□□□□ -0.22
SSRP1-204ENST00000529002 Q56UQ5 140 aa13.68□□□□□ -0.22
SSRP1-204ENST00000529002 SPSB3Q6PJ21 355 aa13.68□□□□□ -0.22
SSRP1-204ENST00000529002 GDPD1Q8N9F7 314 aa13.68□□□□□ -0.22
SSRP1-204ENST00000529002 MND1Q9BWT6 205 aa13.68□□□□□ -0.22
SSRP1-204ENST00000529002 V9GY05 133 aa13.68□□□□□ -0.22
SSRP1-204ENST00000529002 X6R8D5 127 aa13.68□□□□□ -0.22
SSRP1-204ENST00000529002 CTSGP08311 255 aa13.67□□□□□ -0.22
SSRP1-204ENST00000529002 CALRP27797 417 aaKnown RBP13.67□□□□□ -0.22
SSRP1-204ENST00000529002 SPHARQ15513 63 aa13.67□□□□□ -0.22
SSRP1-204ENST00000529002 ZNF773Q6PK81 442 aa13.67□□□□□ -0.22
SSRP1-204ENST00000529002 Q6ZR54 194 aa13.67□□□□□ -0.22
SSRP1-204ENST00000529002 TCF24Q7RTU0 167 aa13.67□□□□□ -0.22
SSRP1-204ENST00000529002 LILRB2Q8N423 598 aa13.67□□□□□ -0.22
SSRP1-204ENST00000529002 DHRSXQ8N5I4 330 aa13.67□□□□□ -0.22
SSRP1-204ENST00000529002 COMMD5Q9GZQ3 224 aa13.67□□□□□ -0.22
SSRP1-204ENST00000529002 CCL28Q9NRJ3 127 aa13.67□□□□□ -0.22
SSRP1-204ENST00000529002 PLCXD1Q9NUJ7 323 aa13.67□□□□□ -0.22
SSRP1-204ENST00000529002 CLEC5AQ9NY25 188 aa13.67□□□□□ -0.22
SSRP1-204ENST00000529002 LRP1BQ9NZR2 4599 aa13.66□□□□□ -0.22
SSRP1-204ENST00000529002 K7EIM0 57 aa13.66□□□□□ -0.22
SSRP1-204ENST00000529002 NUPL2O15504 423 aaKnown RBP13.66□□□□□ -0.22
SSRP1-204ENST00000529002 SLC22A5O76082 557 aa13.66□□□□□ -0.22
SSRP1-204ENST00000529002 YIF1AO95070 293 aa13.66□□□□□ -0.22
SSRP1-204ENST00000529002 SERPINE2P07093 398 aa13.66□□□□□ -0.22
SSRP1-204ENST00000529002 C4BPBP20851 252 aa13.66□□□□□ -0.22
SSRP1-204ENST00000529002 OR10A3P58181 314 aa13.66□□□□□ -0.22
SSRP1-204ENST00000529002 SPAG16Q8N0X2 631 aa13.66□□□□□ -0.22
SSRP1-204ENST00000529002 QTRT1Q9BXR0 403 aaKnown RBP13.66□□□□□ -0.22
SSRP1-204ENST00000529002 APOHP02749 345 aaPredicted RBP13.65□□□□□ -0.22
SSRP1-204ENST00000529002 PTHLHP12272 177 aa13.65□□□□□ -0.22
SSRP1-204ENST00000529002 MIFP14174 115 aa13.65□□□□□ -0.22
SSRP1-204ENST00000529002 ZNF66Q6ZN08 573 aa13.65□□□□□ -0.22
SSRP1-204ENST00000529002 HERC1Q15751 4861 aa13.65□□□□□ -0.22
SSRP1-204ENST00000529002 IGHV3-66A0A0C4DH42 116 aa13.64□□□□□ -0.23
SSRP1-204ENST00000529002 TEX50A0A1B0GTY4 177 aa13.64□□□□□ -0.23
SSRP1-204ENST00000529002 SULT1C2O00338 296 aa13.64□□□□□ -0.23
SSRP1-204ENST00000529002 STHQ8IWL8 128 aa13.64□□□□□ -0.23
SSRP1-204ENST00000529002 C8orf59Q8N0T1 100 aaPredicted RBP13.64□□□□□ -0.23
SSRP1-204ENST00000529002 NUDCD2Q8WVJ2 157 aa13.64□□□□□ -0.23
SSRP1-204ENST00000529002 ST8SIA2Q92186 375 aa13.64□□□□□ -0.23
SSRP1-204ENST00000529002 UFD1Q92890 307 aa13.64□□□□□ -0.23
SSRP1-204ENST00000529002 CMTM3Q96MX0 182 aa13.64□□□□□ -0.23
SSRP1-204ENST00000529002 NDUFAF3Q9BU61 184 aa13.64□□□□□ -0.23
SSRP1-204ENST00000529002 HINT2Q9BX68 163 aa13.64□□□□□ -0.23
SSRP1-204ENST00000529002 MS4A6AQ9H2W1 248 aa13.64□□□□□ -0.23
SSRP1-204ENST00000529002 TMEM140Q9NV12 185 aa13.64□□□□□ -0.23
SSRP1-204ENST00000529002 F11RQ9Y624 299 aaKnown RBP13.64□□□□□ -0.23
SSRP1-204ENST00000529002 ZNF705EA8MWA4 302 aaPredicted RBP13.63□□□□□ -0.23
SSRP1-204ENST00000529002 C16orf90A8MZG2 172 aa13.63□□□□□ -0.23
SSRP1-204ENST00000529002 PTGES3LE9PB15 166 aa13.63□□□□□ -0.23
SSRP1-204ENST00000529002 IFNA10P01566 189 aa13.63□□□□□ -0.23
SSRP1-204ENST00000529002 HSMCR30P0CW71 290 aa13.63□□□□□ -0.23
SSRP1-204ENST00000529002 TRAPPC2P0DI81 140 aa13.63□□□□□ -0.23
SSRP1-204ENST00000529002 TRAPPC2BP0DI82 140 aa13.63□□□□□ -0.23
SSRP1-204ENST00000529002 DTYMKP23919 212 aa13.63□□□□□ -0.23
SSRP1-204ENST00000529002 FABP5Q01469 135 aa13.63□□□□□ -0.23
SSRP1-204ENST00000529002 CDNFQ49AH0 187 aa13.63□□□□□ -0.23
SSRP1-204ENST00000529002 Q6ZRM9 215 aa13.63□□□□□ -0.23
SSRP1-204ENST00000529002 SECTM1Q8WVN6 248 aa13.63□□□□□ -0.23
SSRP1-204ENST00000529002 SRSF8Q9BRL6 282 aaKnown RBP13.63□□□□□ -0.23
SSRP1-204ENST00000529002 TRAV14DV4A0A0A6YYC5 116 aa13.62□□□□□ -0.23
SSRP1-204ENST00000529002 KNCNA6PVL3 124 aa13.62□□□□□ -0.23
SSRP1-204ENST00000529002 DNASE2O00115 360 aaPredicted RBP13.62□□□□□ -0.23
SSRP1-204ENST00000529002 ARL6IP5O75915 188 aa13.62□□□□□ -0.23
SSRP1-204ENST00000529002 DFFBO76075 338 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms