RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 PMP2P02689 132 aa11.57□□□□□ -0.56
CLNS1A-210ENST00000528364 TRAPPC2P0DI81 140 aa11.57□□□□□ -0.56
CLNS1A-210ENST00000528364 TRAPPC2BP0DI82 140 aa11.57□□□□□ -0.56
CLNS1A-210ENST00000528364 LPAR6P43657 344 aa11.57□□□□□ -0.56
CLNS1A-210ENST00000528364 RBPMS2Q6ZRY4 209 aaKnown RBP11.57□□□□□ -0.56
CLNS1A-210ENST00000528364 HINT2Q9BX68 163 aa11.57□□□□□ -0.56
CLNS1A-210ENST00000528364 QTRT1Q9BXR0 403 aaKnown RBP11.57□□□□□ -0.56
CLNS1A-210ENST00000528364 ZNF436Q9C0F3 470 aaPredicted RBP11.57□□□□□ -0.56
CLNS1A-210ENST00000528364 Q9H521 79 aa11.57□□□□□ -0.56
CLNS1A-210ENST00000528364 EHFQ9NZC4 300 aa11.57□□□□□ -0.56
CLNS1A-210ENST00000528364 MRPL27Q9P0M9 148 aaKnown RBP11.57□□□□□ -0.56
CLNS1A-210ENST00000528364 TRAV25A0A0B4J276 109 aa11.56□□□□□ -0.56
CLNS1A-210ENST00000528364 TGOLN2O43493 480 aa11.56□□□□□ -0.56
CLNS1A-210ENST00000528364 XRCC3O43542 346 aa11.56□□□□□ -0.56
CLNS1A-210ENST00000528364 SERPINE2P07093 398 aa11.56□□□□□ -0.56
CLNS1A-210ENST00000528364 CBX5P45973 191 aa11.56□□□□□ -0.56
CLNS1A-210ENST00000528364 HERV-K104P61576 105 aa11.56□□□□□ -0.56
CLNS1A-210ENST00000528364 EWSR1Q01844 656 aaKnown RBP eCLIP11.56□□□□□ -0.56
CLNS1A-210ENST00000528364 ANKRD55Q3KP44 614 aa11.56□□□□□ -0.56
CLNS1A-210ENST00000528364 DHRS11Q6UWP2 260 aa11.56□□□□□ -0.56
CLNS1A-210ENST00000528364 OR1L6Q8NGR2 347 aa11.56□□□□□ -0.56
CLNS1A-210ENST00000528364 ZNF2Q9BSG1 426 aaPredicted RBP11.56□□□□□ -0.56
CLNS1A-210ENST00000528364 CHRDL1Q9BU40 450 aa11.56□□□□□ -0.56
CLNS1A-210ENST00000528364 IFT46Q9NQC8 304 aa11.56□□□□□ -0.56
CLNS1A-210ENST00000528364 UFC1Q9Y3C8 167 aa11.56□□□□□ -0.56
CLNS1A-210ENST00000528364 ALMS1Q8TCU4 4167 aa11.56□□□□□ -0.56
CLNS1A-210ENST00000528364 ZNF207O43670 478 aaKnown RBP11.55□□□□□ -0.56
CLNS1A-210ENST00000528364 KRASP01116 189 aa11.55□□□□□ -0.56
CLNS1A-210ENST00000528364 RLN1P04808 185 aa11.55□□□□□ -0.56
CLNS1A-210ENST00000528364 RPS19P39019 145 aaKnown RBP11.55□□□□□ -0.56
CLNS1A-210ENST00000528364 ELLP55199 621 aaPredicted RBP11.55□□□□□ -0.56
CLNS1A-210ENST00000528364 OR2C3Q8N628 320 aa11.55□□□□□ -0.56
CLNS1A-210ENST00000528364 GDPD1Q8N9F7 314 aa11.55□□□□□ -0.56
CLNS1A-210ENST00000528364 OR1L8Q8NGR8 309 aa11.55□□□□□ -0.56
CLNS1A-210ENST00000528364 CD300LFQ8TDQ1 290 aa11.55□□□□□ -0.56
CLNS1A-210ENST00000528364 VN1R17PQ8TDU5 208 aa11.55□□□□□ -0.56
CLNS1A-210ENST00000528364 FCAMRQ8WWV6 532 aa11.55□□□□□ -0.56
CLNS1A-210ENST00000528364 MARC2Q969Z3 335 aa11.55□□□□□ -0.56
CLNS1A-210ENST00000528364 S100A16Q96FQ6 103 aaKnown RBP11.55□□□□□ -0.56
CLNS1A-210ENST00000528364 SRSF8Q9BRL6 282 aaKnown RBP11.55□□□□□ -0.56
CLNS1A-210ENST00000528364 NDUFA4L2Q9NRX3 87 aa11.55□□□□□ -0.56
CLNS1A-210ENST00000528364 THYN1Q9P016 225 aa11.55□□□□□ -0.56
CLNS1A-210ENST00000528364 DBX1A6NMT0 343 aa11.54□□□□□ -0.56
CLNS1A-210ENST00000528364 F8W735 103 aaPredicted RBP11.54□□□□□ -0.56
CLNS1A-210ENST00000528364 F2RP25116 425 aa11.54□□□□□ -0.56
CLNS1A-210ENST00000528364 ADMP35318 185 aa11.54□□□□□ -0.56
CLNS1A-210ENST00000528364 G6PCP35575 357 aa11.54□□□□□ -0.56
CLNS1A-210ENST00000528364 LSM3P62310 102 aaKnown RBP11.54□□□□□ -0.56
CLNS1A-210ENST00000528364 LYSMD2Q8IV50 215 aa11.54□□□□□ -0.56
CLNS1A-210ENST00000528364 SCARB1Q8WTV0 552 aa11.54□□□□□ -0.56
CLNS1A-210ENST00000528364 TMEM190Q8WZ59 177 aa11.54□□□□□ -0.56
CLNS1A-210ENST00000528364 MOB3AQ96BX8 217 aa11.54□□□□□ -0.56
CLNS1A-210ENST00000528364 C20orf24Q9BUV8 137 aa11.54□□□□□ -0.56
CLNS1A-210ENST00000528364 C5orf66Q9H5L9 145 aa11.54□□□□□ -0.56
CLNS1A-210ENST00000528364 COMMD9Q9P000 198 aa11.54□□□□□ -0.56
CLNS1A-210ENST00000528364 ANAPC10Q9UM13 185 aa11.54□□□□□ -0.56
CLNS1A-210ENST00000528364 OR51B2Q9Y5P1 312 aa11.54□□□□□ -0.56
CLNS1A-210ENST00000528364 A0A0J9YWU9 116 aa11.53□□□□□ -0.56
CLNS1A-210ENST00000528364 MARCH11A6NNE9 402 aa11.53□□□□□ -0.56
CLNS1A-210ENST00000528364 TAS2R20P59543 309 aa11.53□□□□□ -0.56
CLNS1A-210ENST00000528364 ERVK-16P61578 105 aa11.53□□□□□ -0.56
CLNS1A-210ENST00000528364 PMS2P11Q13670 270 aa11.53□□□□□ -0.56
CLNS1A-210ENST00000528364 SLC38A6Q8IZM9 456 aa11.53□□□□□ -0.56
CLNS1A-210ENST00000528364 SAMD12Q8N8I0 201 aa11.53□□□□□ -0.56
CLNS1A-210ENST00000528364 DGCR14Q96DF8 476 aaKnown RBP11.53□□□□□ -0.56
CLNS1A-210ENST00000528364 ZNF414Q96IQ9 312 aa11.53□□□□□ -0.56
CLNS1A-210ENST00000528364 FXYD6Q9H0Q3 95 aa11.53□□□□□ -0.56
CLNS1A-210ENST00000528364 F11RQ9Y624 299 aaKnown RBP11.53□□□□□ -0.56
CLNS1A-210ENST00000528364 K7EIM0 57 aa11.52□□□□□ -0.57
CLNS1A-210ENST00000528364 TSPAN4O14817 238 aa11.52□□□□□ -0.57
CLNS1A-210ENST00000528364 NAT1P18440 290 aa11.52□□□□□ -0.57
CLNS1A-210ENST00000528364 ODF3L2Q3SX64 289 aa11.52□□□□□ -0.57
CLNS1A-210ENST00000528364 UBE2NLQ5JXB2 153 aa11.52□□□□□ -0.57
CLNS1A-210ENST00000528364 UBAC2Q8NBM4 344 aa11.52□□□□□ -0.57
CLNS1A-210ENST00000528364 OR5H2Q8NGV7 314 aa11.52□□□□□ -0.57
CLNS1A-210ENST00000528364 C21orf62Q9NYP8 219 aa11.52□□□□□ -0.57
CLNS1A-210ENST00000528364 SPRY2O43597 315 aa11.51□□□□□ -0.57
CLNS1A-210ENST00000528364 FGF2P09038 288 aa11.51□□□□□ -0.57
CLNS1A-210ENST00000528364 RPL35AP18077 110 aaKnown RBP11.51□□□□□ -0.57
CLNS1A-210ENST00000528364 HLA-DMAP28067 261 aa11.51□□□□□ -0.57
CLNS1A-210ENST00000528364 DEFB135Q30KP9 77 aa11.51□□□□□ -0.57
CLNS1A-210ENST00000528364 PHLDA2Q53GA4 152 aa11.51□□□□□ -0.57
CLNS1A-210ENST00000528364 TMEM69Q5SWH9 247 aa11.51□□□□□ -0.57
CLNS1A-210ENST00000528364 LSM10Q969L4 123 aaKnown RBP11.51□□□□□ -0.57
CLNS1A-210ENST00000528364 BSCL2Q96G97 398 aaPredicted RBP11.51□□□□□ -0.57
CLNS1A-210ENST00000528364 SPAG8Q99932 426 aaPredicted RBP11.51□□□□□ -0.57
CLNS1A-210ENST00000528364 DAZ1Q9NQZ3 744 aaKnown RBP11.51□□□□□ -0.57
CLNS1A-210ENST00000528364 IGHV3-49A0A0A0MS15 119 aa11.5□□□□□ -0.57
CLNS1A-210ENST00000528364 CXorf65A6NEN9 183 aa11.5□□□□□ -0.57
CLNS1A-210ENST00000528364 GPR31O00270 319 aa11.5□□□□□ -0.57
CLNS1A-210ENST00000528364 NDUFA4O00483 81 aa11.5□□□□□ -0.57
CLNS1A-210ENST00000528364 CYB5BO43169 146 aa11.5□□□□□ -0.57
CLNS1A-210ENST00000528364 SNAPC5O75971 98 aa11.5□□□□□ -0.57
CLNS1A-210ENST00000528364 CTSDP07339 412 aaPredicted RBP11.5□□□□□ -0.57
CLNS1A-210ENST00000528364 CTSGP08311 255 aa11.5□□□□□ -0.57
CLNS1A-210ENST00000528364 PRSS3P35030 304 aa11.5□□□□□ -0.57
CLNS1A-210ENST00000528364 HRH1P35367 487 aa11.5□□□□□ -0.57
CLNS1A-210ENST00000528364 KCTD21Q4G0X4 260 aa11.5□□□□□ -0.57
CLNS1A-210ENST00000528364 Q56UQ5 140 aa11.5□□□□□ -0.57
CLNS1A-210ENST00000528364 THOC7Q6I9Y2 204 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms