RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 G6PCP35575 357 aa15.72■□□□□ 0.11
VPS28-206ENST00000526734 LAX1Q8IWV1 398 aa15.72■□□□□ 0.11
VPS28-206ENST00000526734 Q8N402 240 aa15.72■□□□□ 0.11
VPS28-206ENST00000526734 GDPD1Q8N9F7 314 aa15.72■□□□□ 0.11
VPS28-206ENST00000526734 DYNC2LI1Q8TCX1 351 aa15.72■□□□□ 0.11
VPS28-206ENST00000526734 TEX50A0A1B0GTY4 177 aa15.71■□□□□ 0.11
VPS28-206ENST00000526734 LGALS9O00182 355 aa15.71■□□□□ 0.11
VPS28-206ENST00000526734 REG1AP05451 166 aa15.71■□□□□ 0.11
VPS28-206ENST00000526734 SERPINE2P07093 398 aa15.71■□□□□ 0.11
VPS28-206ENST00000526734 ARL3P36405 182 aa15.71■□□□□ 0.11
VPS28-206ENST00000526734 C11orf87Q6NUJ2 197 aa15.71■□□□□ 0.11
VPS28-206ENST00000526734 C19orf35Q6ZS72 473 aa15.71■□□□□ 0.11
VPS28-206ENST00000526734 OR1L6Q8NGR2 347 aa15.71■□□□□ 0.11
VPS28-206ENST00000526734 ZFAND1Q8TCF1 268 aa15.71■□□□□ 0.11
VPS28-206ENST00000526734 SMIM4Q8WVI0 70 aa15.71■□□□□ 0.11
VPS28-206ENST00000526734 CCDC140Q96MF4 163 aa15.71■□□□□ 0.11
VPS28-206ENST00000526734 TMEM56Q96MV1 263 aa15.71■□□□□ 0.11
VPS28-206ENST00000526734 NDUFA4L2Q9NRX3 87 aa15.71■□□□□ 0.11
VPS28-206ENST00000526734 OR51B2Q9Y5P1 312 aa15.71■□□□□ 0.11
VPS28-206ENST00000526734 C15orf61A6NNL5 157 aa15.7■□□□□ 0.1
VPS28-206ENST00000526734 CTDSP2O14595 271 aa15.7■□□□□ 0.1
VPS28-206ENST00000526734 CTDSPLO15194 276 aa15.7■□□□□ 0.1
VPS28-206ENST00000526734 ATG12O94817 140 aa15.7■□□□□ 0.1
VPS28-206ENST00000526734 RAB3DO95716 219 aa15.7■□□□□ 0.1
VPS28-206ENST00000526734 MEF2DQ14814 521 aa15.7■□□□□ 0.1
VPS28-206ENST00000526734 GPHB5Q86YW7 130 aa15.7■□□□□ 0.1
VPS28-206ENST00000526734 VN1R17PQ8TDU5 208 aa15.7■□□□□ 0.1
VPS28-206ENST00000526734 ATP6V0BQ99437 205 aa15.7■□□□□ 0.1
VPS28-206ENST00000526734 TMEM14BQ9NUH8 114 aa15.7■□□□□ 0.1
VPS28-206ENST00000526734 DMRT1Q9Y5R6 373 aa15.7■□□□□ 0.1
VPS28-206ENST00000526734 B3GALNT1O75752 331 aa15.69■□□□□ 0.1
VPS28-206ENST00000526734 OR13C7P0DN81 318 aa15.69■□□□□ 0.1
VPS28-206ENST00000526734 FAM106AQ4KMX7 169 aa15.69■□□□□ 0.1
VPS28-206ENST00000526734 STEAP1BQ6NZ63 245 aa15.69■□□□□ 0.1
VPS28-206ENST00000526734 CLEC19AQ6UXS0 136 aa15.69■□□□□ 0.1
VPS28-206ENST00000526734 H2BFWTQ7Z2G1 175 aa15.69■□□□□ 0.1
VPS28-206ENST00000526734 HAPLN4Q86UW8 402 aa15.69■□□□□ 0.1
VPS28-206ENST00000526734 SGPP2Q8IWX5 399 aa15.69■□□□□ 0.1
VPS28-206ENST00000526734 CCDC71LQ8N9Z2 235 aa15.69■□□□□ 0.1
VPS28-206ENST00000526734 TERB2Q8NHR7 220 aa15.69■□□□□ 0.1
VPS28-206ENST00000526734 DIRAS2Q96HU8 199 aa15.69■□□□□ 0.1
VPS28-206ENST00000526734 SEC22AQ96IW7 307 aa15.69■□□□□ 0.1
VPS28-206ENST00000526734 PPP5D1E7EU14 171 aa15.68■□□□□ 0.1
VPS28-206ENST00000526734 WT1-ASQ06250 92 aa15.68■□□□□ 0.1
VPS28-206ENST00000526734 OR10W1Q8NGF6 305 aa15.68■□□□□ 0.1
VPS28-206ENST00000526734 HINT2Q9BX68 163 aa15.68■□□□□ 0.1
VPS28-206ENST00000526734 F11RQ9Y624 299 aaKnown RBP15.68■□□□□ 0.1
VPS28-206ENST00000526734 A8MZ25 164 aa15.67■□□□□ 0.1
VPS28-206ENST00000526734 H3BMQ9 156 aa15.67■□□□□ 0.1
VPS28-206ENST00000526734 MECP2P51608 486 aaKnown RBP15.67■□□□□ 0.1
VPS28-206ENST00000526734 PIGPP57054 158 aa15.67■□□□□ 0.1
VPS28-206ENST00000526734 IL18Q14116 193 aa15.67■□□□□ 0.1
VPS28-206ENST00000526734 GTSCR1Q86UQ5 136 aa15.67■□□□□ 0.1
VPS28-206ENST00000526734 OR4A16Q8NH70 328 aa15.67■□□□□ 0.1
VPS28-206ENST00000526734 ZNF502Q8TBZ5 544 aa15.67■□□□□ 0.1
VPS28-206ENST00000526734 DYNLRB2Q8TF09 96 aa15.67■□□□□ 0.1
VPS28-206ENST00000526734 ISOC1Q96CN7 298 aa15.67■□□□□ 0.1
VPS28-206ENST00000526734 TECRQ9NZ01 308 aaKnown RBP15.67■□□□□ 0.1
VPS28-206ENST00000526734 COPZ2Q9P299 210 aa15.67■□□□□ 0.1
VPS28-206ENST00000526734 RSL24D1Q9UHA3 163 aaKnown RBP15.67■□□□□ 0.1
VPS28-206ENST00000526734 NSG2Q9Y328 171 aa15.67■□□□□ 0.1
VPS28-206ENST00000526734 U3KQK5 164 aa15.67■□□□□ 0.1
VPS28-206ENST00000526734 MFSD2BA6NFX1 497 aa15.66■□□□□ 0.1
VPS28-206ENST00000526734 A8MWP6 167 aa15.66■□□□□ 0.1
VPS28-206ENST00000526734 OR2C1O95371 312 aa15.66■□□□□ 0.1
VPS28-206ENST00000526734 PPP5CP53041 499 aa15.66■□□□□ 0.1
VPS28-206ENST00000526734 SURF2Q15527 256 aaPredicted RBP15.66■□□□□ 0.1
VPS28-206ENST00000526734 SCGB2B2Q4G0G5 96 aa15.66■□□□□ 0.1
VPS28-206ENST00000526734 MRGPRFQ96AM1 343 aa15.66■□□□□ 0.1
VPS28-206ENST00000526734 WWC2-AS2Q96NR7 200 aa15.66■□□□□ 0.1
VPS28-206ENST00000526734 C6orf62Q9GZU0 229 aaPredicted RBP15.66■□□□□ 0.1
VPS28-206ENST00000526734 C2orf70A6NJV1 201 aa15.65■□□□□ 0.1
VPS28-206ENST00000526734 DISC1C4P0D8 188 aa15.65■□□□□ 0.1
VPS28-206ENST00000526734 IGKV1-39P01597 117 aa15.65■□□□□ 0.1
VPS28-206ENST00000526734 IGHV3-23P01764 117 aa15.65■□□□□ 0.1
VPS28-206ENST00000526734 IGKV1D-39P04432 117 aa15.65■□□□□ 0.1
VPS28-206ENST00000526734 CLEC3BP05452 202 aa15.65■□□□□ 0.1
VPS28-206ENST00000526734 CTSDP07339 412 aaPredicted RBP15.65■□□□□ 0.1
VPS28-206ENST00000526734 FRMD6-AS1P0C7T7 363 aa15.65■□□□□ 0.1
VPS28-206ENST00000526734 SLC25A24Q6NUK1 477 aa15.65■□□□□ 0.1
VPS28-206ENST00000526734 Q8N1Y9 231 aa15.65■□□□□ 0.1
VPS28-206ENST00000526734 OR4D10Q8NGI6 311 aa15.65■□□□□ 0.1
VPS28-206ENST00000526734 SLIRPQ9GZT3 109 aaKnown RBP15.65■□□□□ 0.1
VPS28-206ENST00000526734 PALMDQ9NP74 551 aa15.65■□□□□ 0.1
VPS28-206ENST00000526734 C3orf85A0A1B0GTC6 90 aa15.64■□□□□ 0.09
VPS28-206ENST00000526734 GSTZ1O43708 216 aaPredicted RBP15.64■□□□□ 0.09
VPS28-206ENST00000526734 HLA-AP01891 365 aaKnown RBP15.64■□□□□ 0.09
VPS28-206ENST00000526734 AKAIN1P0CW23 69 aa15.64■□□□□ 0.09
VPS28-206ENST00000526734 FOLR2P14207 255 aa15.64■□□□□ 0.09
VPS28-206ENST00000526734 OR13C8Q8NGS7 320 aa15.64■□□□□ 0.09
VPS28-206ENST00000526734 OR1P1Q8NH06 330 aa15.64■□□□□ 0.09
VPS28-206ENST00000526734 MARC2Q969Z3 335 aa15.64■□□□□ 0.09
VPS28-206ENST00000526734 GAR1Q9NY12 217 aaKnown RBP15.64■□□□□ 0.09
VPS28-206ENST00000526734 C14orf166Q9Y224 244 aaKnown RBP15.64■□□□□ 0.09
VPS28-206ENST00000526734 S4R3C0 116 aa15.64■□□□□ 0.09
VPS28-206ENST00000526734 IGHV4-30-4P0DP06 118 aa15.63■□□□□ 0.09
VPS28-206ENST00000526734 PI3P19957 117 aa15.63■□□□□ 0.09
VPS28-206ENST00000526734 GPR183P32249 361 aa15.63■□□□□ 0.09
VPS28-206ENST00000526734 AKR1C2P52895 323 aa15.63■□□□□ 0.09
VPS28-206ENST00000526734 HSPE1P61604 102 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms