RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 NSG2Q9Y328 171 aa16.21■□□□□ 0.19
CD44-222ENST00000526025 A0A0G2JRQ6 117 aa16.2■□□□□ 0.18
CD44-222ENST00000526025 CRYGCP07315 174 aa16.2■□□□□ 0.18
CD44-222ENST00000526025 TRAPPC2P0DI81 140 aa16.2■□□□□ 0.18
CD44-222ENST00000526025 TRAPPC2BP0DI82 140 aa16.2■□□□□ 0.18
CD44-222ENST00000526025 RPL23AP62750 156 aaKnown RBP16.2■□□□□ 0.18
CD44-222ENST00000526025 KLK9Q2XQG4 91 aa16.2■□□□□ 0.18
CD44-222ENST00000526025 C4orf46Q504U0 113 aa16.2■□□□□ 0.18
CD44-222ENST00000526025 NMSQ5H8A3 153 aa16.2■□□□□ 0.18
CD44-222ENST00000526025 TMEM65Q6PI78 240 aa16.2■□□□□ 0.18
CD44-222ENST00000526025 NRARPQ7Z6K4 114 aa16.2■□□□□ 0.18
CD44-222ENST00000526025 MRPL41Q8IXM3 137 aaKnown RBP16.2■□□□□ 0.18
CD44-222ENST00000526025 C11orf44Q8N8P7 122 aa16.2■□□□□ 0.18
CD44-222ENST00000526025 FYTTD1Q96QD9 318 aaKnown RBP16.2■□□□□ 0.18
CD44-222ENST00000526025 KLK9Q9UKQ9 250 aa16.2■□□□□ 0.18
CD44-222ENST00000526025 TRAV6A0A075B6T7 132 aa16.19■□□□□ 0.18
CD44-222ENST00000526025 IGLC7A0M8Q6 106 aa16.19■□□□□ 0.18
CD44-222ENST00000526025 DBX1A6NMT0 343 aa16.19■□□□□ 0.18
CD44-222ENST00000526025 ADARB2-AS1A8MUL3 147 aa16.19■□□□□ 0.18
CD44-222ENST00000526025 MYOD1P15172 320 aa16.19■□□□□ 0.18
CD44-222ENST00000526025 RAB9AP51151 201 aa16.19■□□□□ 0.18
CD44-222ENST00000526025 HSPE1P61604 102 aaKnown RBP16.19■□□□□ 0.18
CD44-222ENST00000526025 C2orf68Q2NKX9 166 aa16.19■□□□□ 0.18
CD44-222ENST00000526025 COQ8AQ8NI60 647 aa16.19■□□□□ 0.18
CD44-222ENST00000526025 CASTOR1Q8WTX7 329 aa16.19■□□□□ 0.18
CD44-222ENST00000526025 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.19■□□□□ 0.18
CD44-222ENST00000526025 PRR13Q9NZ81 148 aa16.19■□□□□ 0.18
CD44-222ENST00000526025 TMED3Q9Y3Q3 217 aa16.19■□□□□ 0.18
CD44-222ENST00000526025 HMX3A6NHT5 357 aa16.18■□□□□ 0.18
CD44-222ENST00000526025 INS-IGF2F8WCM5 200 aa16.18■□□□□ 0.18
CD44-222ENST00000526025 M0QZ24 198 aa16.18■□□□□ 0.18
CD44-222ENST00000526025 RBMXL2O75526 392 aaKnown RBP16.18■□□□□ 0.18
CD44-222ENST00000526025 RPLP1P05386 114 aaKnown RBP16.18■□□□□ 0.18
CD44-222ENST00000526025 PF4V1P10720 104 aa16.18■□□□□ 0.18
CD44-222ENST00000526025 SLC25A6P12236 298 aa16.18■□□□□ 0.18
CD44-222ENST00000526025 PSMB6P28072 239 aa16.18■□□□□ 0.18
CD44-222ENST00000526025 CDX1P47902 265 aaPredicted RBP16.18■□□□□ 0.18
CD44-222ENST00000526025 PRCDQ00LT1 54 aa16.18■□□□□ 0.18
CD44-222ENST00000526025 PDLIM3Q53GG5 364 aaPredicted RBP16.18■□□□□ 0.18
CD44-222ENST00000526025 LYZL2Q7Z4W2 148 aa16.18■□□□□ 0.18
CD44-222ENST00000526025 OR5T1Q8NG75 326 aa16.18■□□□□ 0.18
CD44-222ENST00000526025 OR52E5Q8NH55 327 aa16.18■□□□□ 0.18
CD44-222ENST00000526025 MITD1Q8WV92 249 aa16.18■□□□□ 0.18
CD44-222ENST00000526025 GPR146Q96CH1 333 aa16.18■□□□□ 0.18
CD44-222ENST00000526025 UBE2E2Q96LR5 201 aa16.18■□□□□ 0.18
CD44-222ENST00000526025 A0A1B0GU03 582 aa16.17■□□□□ 0.18
CD44-222ENST00000526025 DHFRP00374 187 aa16.17■□□□□ 0.18
CD44-222ENST00000526025 IL5P05113 134 aa16.17■□□□□ 0.18
CD44-222ENST00000526025 SULT1A3P0DMM9 295 aa16.17■□□□□ 0.18
CD44-222ENST00000526025 SULT1A4P0DMN0 295 aa16.17■□□□□ 0.18
CD44-222ENST00000526025 CTRB1P17538 263 aa16.17■□□□□ 0.18
CD44-222ENST00000526025 KIAA0141Q14154 515 aaPredicted RBP16.17■□□□□ 0.18
CD44-222ENST00000526025 IZUMO4Q1ZYL8 232 aa16.17■□□□□ 0.18
CD44-222ENST00000526025 CTRB2Q6GPI1 263 aa16.17■□□□□ 0.18
CD44-222ENST00000526025 PLET1Q6UQ28 207 aa16.17■□□□□ 0.18
CD44-222ENST00000526025 Q6ZRM9 215 aa16.17■□□□□ 0.18
CD44-222ENST00000526025 KLK15Q9H2R5 256 aa16.17■□□□□ 0.18
CD44-222ENST00000526025 CACNG5Q9UF02 275 aa16.17■□□□□ 0.18
CD44-222ENST00000526025 ST8SIA3O43173 380 aa16.16■□□□□ 0.18
CD44-222ENST00000526025 PTTG1O95997 202 aa16.16■□□□□ 0.18
CD44-222ENST00000526025 AREGP15514 252 aa16.16■□□□□ 0.18
CD44-222ENST00000526025 SMCO1Q147U7 214 aa16.16■□□□□ 0.18
CD44-222ENST00000526025 ZNF491Q8N8L2 437 aa16.16■□□□□ 0.18
CD44-222ENST00000526025 MARVELD1Q9BSK0 173 aa16.16■□□□□ 0.18
CD44-222ENST00000526025 PDCD10Q9BUL8 212 aa16.16■□□□□ 0.18
CD44-222ENST00000526025 WNK1Q9H4A3 2382 aa16.16■□□□□ 0.18
CD44-222ENST00000526025 TRBV9A0A0B4J1U6 114 aa16.15■□□□□ 0.18
CD44-222ENST00000526025 APELAP0DMC3 54 aa16.15■□□□□ 0.18
CD44-222ENST00000526025 SPCS3P61009 180 aa16.15■□□□□ 0.18
CD44-222ENST00000526025 RUNX1Q01196 453 aa16.15■□□□□ 0.18
CD44-222ENST00000526025 WT1-ASQ06250 92 aa16.15■□□□□ 0.18
CD44-222ENST00000526025 DCTN2Q13561 401 aaKnown RBP16.15■□□□□ 0.18
CD44-222ENST00000526025 KHDC1LQ5JSQ8 128 aa16.15■□□□□ 0.18
CD44-222ENST00000526025 ZNF431Q8TF32 576 aaPredicted RBP16.15■□□□□ 0.18
CD44-222ENST00000526025 A0A0G2JLM5 398 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 FAM223BA6NKX1 122 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 CYB5BO43169 146 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 PRAF2O60831 178 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 TRGV3P03979 118 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 OR13C7P0DN81 318 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 HIST1H1BP16401 226 aaKnown RBP16.14■□□□□ 0.17
CD44-222ENST00000526025 TPPP2P59282 170 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 NSUN5P1Q3KNT7 163 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 LCNL1Q6ZST4 164 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 FAM223AQ8IWN6 122 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 ZNF114Q8NC26 417 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 OR4F17Q8NGA8 305 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 OR10W1Q8NGF6 305 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 OR1L6Q8NGR2 347 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 C4orf3Q8WVX3 66 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 USMG5Q96IX5 58 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 OR4F4Q96R69 305 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 PLEKHA3Q9HB20 300 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 ZNF355PQ9NSJ1 428 aa16.14■□□□□ 0.17
CD44-222ENST00000526025 TRRAPQ9Y4A5 3859 aa16.13■□□□□ 0.17
CD44-222ENST00000526025 PITX3O75364 302 aa16.13■□□□□ 0.17
CD44-222ENST00000526025 IFNA17P01571 189 aa16.13■□□□□ 0.17
CD44-222ENST00000526025 OR2C3Q8N628 320 aa16.13■□□□□ 0.17
CD44-222ENST00000526025 NECAP1Q8NC96 275 aa16.13■□□□□ 0.17
CD44-222ENST00000526025 OR52B4Q8NGK2 314 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms