RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 ROCK2O75116 1388 aaKnown RBP3.55□□□□□ -1.84
USP47-204ENST00000525078 ABCC12Q96J65 1359 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 IGSF9BQ9UPX0 1349 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 IGLV4-69A0A075B6H9 119 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 IGLV3-10A0A075B6K4 115 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 TRBV24-1A0A075B6N3 115 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 A0A0B4J2C4 111 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 DUXBA0A1W2PPF3 345 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 H3BMM0 161 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 PIAS1O75925 651 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 FAM107AO95990 144 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 IFNA10P01566 189 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 IL4P05112 153 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 NPPCP23582 126 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 GABRA2P47869 451 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 NOVP48745 357 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 TSPEAR-AS2P59090 65 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 ZNF616Q08AN1 781 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 SPCS2Q15005 226 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 C10orf91Q5T1B1 145 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 RPL22L1Q6P5R6 122 aaKnown RBP3.55□□□□□ -1.84
USP47-204ENST00000525078 ZFAND2AQ8N6M9 145 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 TMEM105Q8N8V8 129 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 OR4D11Q8NGI4 311 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 THEM6Q8WUY1 208 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 UBE2WQ96B02 151 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 C2orf50Q96LR7 162 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 FOPNLQ96NB1 174 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 LAMTOR3Q9UHA4 124 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 FUT9Q9Y231 359 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 LINC00588Q9Y4M8 146 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 DOCK8Q8NF50 2099 aa3.55□□□□□ -1.84
USP47-204ENST00000525078 TEX14Q8IWB6 1497 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 MBD5Q9P267 1494 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 TICRRQ7Z2Z1 1910 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 NAIPQ13075 1403 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 UHRF1BP1Q6BDS2 1440 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 SCAPERQ9BY12 1400 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 KIF1BO60333 1816 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 J3KT08 172 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 LHBP01229 141 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 COX4I1P13073 169 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 SLC25A16P16260 332 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 ZNF19P17023 458 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 CASP1P29466 404 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 RPL27AP46776 148 aaKnown RBP3.54□□□□□ -1.84
USP47-204ENST00000525078 NDPQ00604 133 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 HTR4Q13639 388 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 Q5W150 140 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
USP47-204ENST00000525078 RASL11AQ6T310 242 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 SAXO1Q8IYX7 474 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 TMEM86AQ8N2M4 240 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 ZNF433Q8N7K0 673 aaPredicted RBP3.54□□□□□ -1.84
USP47-204ENST00000525078 SPANXA2-OT1Q8N9U9 137 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 OR10D4PQ8NGN7 298 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 OR13C4Q8NGS5 318 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 H1FXQ92522 213 aaKnown RBP3.54□□□□□ -1.84
USP47-204ENST00000525078 DOHHQ9BU89 302 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 OR2J1Q9GZK6 312 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 RPS10P5Q9NQ39 176 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 PCTPQ9UKL6 214 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 LAMC1P11047 1609 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 CLASP1Q7Z460 1538 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 UGGT2Q9NYU1 1516 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 ARHGEF12Q9NZN5 1544 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 CFTRP13569 1480 aa3.54□□□□□ -1.84
USP47-204ENST00000525078 RPRD2Q5VT52 1461 aaKnown RBP3.54□□□□□ -1.84
USP47-204ENST00000525078 CRB1P82279 1406 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 NID2Q14112 1375 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 TRAV41A0A0B4J266 112 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 A8MWP6 167 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 NDUFA2O43678 99 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 PRM2P04554 102 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 BPGMP07738 259 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 CA5AP35218 305 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 TAS2R20P59543 309 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 AADACL3Q5VUY0 350 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 SPATA12Q7Z6I5 190 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 OR8J3Q8NGG0 315 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 FNDC9Q8TBE3 224 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 DNAJC9Q8WXX5 260 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 CGREF1Q99674 301 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 IL36BQ9NZH7 164 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 COPZ2Q9P299 210 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 MCTS1Q9ULC4 181 aaKnown RBP3.53□□□□□ -1.84
USP47-204ENST00000525078 KLK5Q9Y337 293 aaPredicted RBP3.53□□□□□ -1.84
USP47-204ENST00000525078 KDM5CP41229 1560 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 KIAA1671Q9BY89 1806 aa3.53□□□□□ -1.84
USP47-204ENST00000525078 NUP214P35658 2090 aaPredicted RBP3.53□□□□□ -1.84
USP47-204ENST00000525078 MYOM3Q5VTT5 1437 aa3.53□□□□□ -1.85
USP47-204ENST00000525078 ADGBQ8N7X0 1667 aa3.52□□□□□ -1.85
USP47-204ENST00000525078 A0A087WUU8 490 aa3.52□□□□□ -1.85
USP47-204ENST00000525078 C1orf196B1AJZ1 125 aa3.52□□□□□ -1.85
USP47-204ENST00000525078 LECT2O14960 151 aa3.52□□□□□ -1.85
USP47-204ENST00000525078 RPL7P18124 248 aaKnown RBP3.52□□□□□ -1.85
USP47-204ENST00000525078 OGNP20774 298 aaKnown RBP3.52□□□□□ -1.85
USP47-204ENST00000525078 S100A4P26447 101 aaKnown RBP3.52□□□□□ -1.85
USP47-204ENST00000525078 BLVRBP30043 206 aaPredicted RBP3.52□□□□□ -1.85
USP47-204ENST00000525078 CCL20P78556 96 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms