RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 TRAV27A0A087WT01 109 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 A0A1B0GW64 132 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 TMEM30CPA0ZSE6 113 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 IZUMO1RA6ND01 250 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 A8MTW9 85 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 PRSS46E5RG02 174 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 E5RGE8 158 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 G3V318 75 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 ZNF593O00488 134 aaPredicted RBP0.96□□□□□ -2.26
CD44-212ENST00000524922 FFAR1O14842 300 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 UBDO15205 165 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 SNNO75324 88 aaPredicted RBP0.96□□□□□ -2.26
CD44-212ENST00000524922 ADAP1O75689 374 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 PIAS1O75925 651 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 SLC22A5O76082 557 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 GYPBP06028 91 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 CRYGBP07316 175 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 CHRNGP07510 517 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 OR9G9P0C7N8 305 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 H2AFXP16104 143 aaPredicted RBP0.96□□□□□ -2.26
CD44-212ENST00000524922 HIST1H1CP16403 213 aaKnown RBP0.96□□□□□ -2.26
CD44-212ENST00000524922 ZNF3P17036 446 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 SPI1P17947 270 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 GABRR1P24046 479 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 CALRP27797 417 aaKnown RBP0.96□□□□□ -2.26
CD44-212ENST00000524922 ALDH3A1P30838 453 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 ETV6P41212 452 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 OR3A3P47888 321 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 TFPI2P48307 235 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 SERPINB10P48595 397 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 MNAT1P51948 309 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 AP2S1P53680 142 aaPredicted RBP0.96□□□□□ -2.26
CD44-212ENST00000524922 UBE2KP61086 200 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 STX1BP61266 288 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 PAFAH1B2P68402 229 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 TSPAN31Q12999 210 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 GPR176Q14439 515 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 CDK5R1Q15078 307 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 MSMO1Q15800 293 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 LRRC36Q1X8D7 754 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 MICAQ29983 383 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 TNFAIP8L3Q5GJ75 292 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 RBM48Q5RL73 367 aaKnown RBP0.96□□□□□ -2.26
CD44-212ENST00000524922 AADACL4Q5VUY2 407 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 PLCXD3Q63HM9 321 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 OR10K2Q6IF99 312 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 UNQ5815/PRO19632Q6UWF5 114 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 CLEC19AQ6UXS0 136 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 ZNF730Q6ZMV8 503 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 RASSF6Q6ZTQ3 369 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 MOB3BQ86TA1 216 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 TPRA1Q86W33 373 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 UBE2DNLQ8IWF7 75 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 CEND1Q8N111 149 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 CLEC4FQ8N1N0 589 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 MREGQ8N565 214 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 Q8N9L7 120 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 PROKR2Q8NFJ6 384 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 OR4D11Q8NGI4 311 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 OR13C2Q8NGS9 318 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 OR51A7Q8NH64 312 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 KCNG3Q8TAE7 436 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 CNIH3Q8TBE1 160 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 FANK1Q8TC84 345 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 CD300LFQ8TDQ1 290 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 DNAJC9Q8WXX5 260 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 PIGCQ92535 297 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 FAM46BQ96A09 425 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 EEF1AKMT3Q96AZ1 226 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 DGCR14Q96DF8 476 aaKnown RBP0.96□□□□□ -2.26
CD44-212ENST00000524922 BORCS8Q96FH0 119 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 VSIG2Q96IQ7 327 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 ADTRPQ96IZ2 230 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 C16orf45Q96MC5 204 aaPredicted RBP0.96□□□□□ -2.26
CD44-212ENST00000524922 NMNAT3Q96T66 252 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 CNN2Q99439 309 aaKnown RBP0.96□□□□□ -2.26
CD44-212ENST00000524922 SORT1Q99523 831 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 CGREF1Q99674 301 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 TXN2Q99757 166 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 AGMATQ9BSE5 352 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 TM2D1Q9BX74 207 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 PARD6BQ9BYG5 372 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 PRRG3Q9BZD7 231 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 SH3BGRL3Q9H299 93 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 IFI27L2Q9H2X8 130 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 OR52D1Q9H346 318 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 TMEM231Q9H6L2 316 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 VSIRQ9H7M9 311 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 WDR76Q9H967 626 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 PARP11Q9NR21 331 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 ADA2Q9NZK5 511 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 VAPAQ9P0L0 249 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 ZNF319Q9P2F9 582 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 MLXQ9UH92 298 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 LINC00527Q9UJ94 153 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 TBC1D24Q9ULP9 559 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 NSG2Q9Y328 171 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 WASHC3Q9Y3C0 194 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 IER3IP1Q9Y5U9 82 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 RFNGQ9Y644 331 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms