RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 TM2D3Q9BRN9 247 aa3.22□□□□□ -1.89
SKP1-211ENST00000523359 ZNF436Q9C0F3 470 aaPredicted RBP3.22□□□□□ -1.89
SKP1-211ENST00000523359 OR8D2Q9GZM6 311 aa3.22□□□□□ -1.89
SKP1-211ENST00000523359 LPAR5Q9H1C0 372 aa3.22□□□□□ -1.89
SKP1-211ENST00000523359 OR2D2Q9H210 308 aa3.22□□□□□ -1.89
SKP1-211ENST00000523359 MED11Q9P086 117 aa3.22□□□□□ -1.89
SKP1-211ENST00000523359 TRAPPC2LQ9UL33 140 aa3.22□□□□□ -1.89
SKP1-211ENST00000523359 AMMECR1Q9Y4X0 333 aaPredicted RBP3.22□□□□□ -1.89
SKP1-211ENST00000523359 PLXND1Q9Y4D7 1925 aa3.22□□□□□ -1.89
SKP1-211ENST00000523359 MAPKBP1O60336 1514 aa3.22□□□□□ -1.89
SKP1-211ENST00000523359 PRDM15P57071 1507 aaPredicted RBP3.22□□□□□ -1.89
SKP1-211ENST00000523359 NUP210Q8TEM1 1887 aaPredicted RBP3.22□□□□□ -1.89
SKP1-211ENST00000523359 CEP170Q5SW79 1584 aa3.21□□□□□ -1.89
SKP1-211ENST00000523359 DISP2A7MBM2 1401 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 RTEL1-TNFRSF6BF6WH68 1400 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 H3BQF6 201 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 GNG7O60262 68 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 PGLYRP1O75594 196 aaPredicted RBP3.21□□□□□ -1.9
SKP1-211ENST00000523359 CXorf1O96002 111 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 BCL2P10415 239 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 GABRA3P34903 492 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 RPL35P42766 123 aaKnown RBP3.21□□□□□ -1.9
SKP1-211ENST00000523359 BIKQ13323 160 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 RHEBQ15382 184 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 NEDD8Q15843 81 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 ORMDL2Q53FV1 153 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 LYPD2Q6UXB3 125 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 Q6ZS49 121 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 MARCH3Q86UD3 253 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 IFT20Q8IY31 132 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 NPBQ8NG41 125 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 OR52R1Q8NGF1 315 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 ZNF418Q8TF45 676 aaPredicted RBP3.21□□□□□ -1.9
SKP1-211ENST00000523359 ERMAPQ96PL5 475 aaPredicted RBP3.21□□□□□ -1.9
SKP1-211ENST00000523359 NMNAT3Q96T66 252 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 CCL13Q99616 98 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 COMMD5Q9GZQ3 224 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 MED28Q9H204 178 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 KCNIP2Q9NS61 270 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 NUFIP1Q9UHK0 495 aaKnown RBP3.21□□□□□ -1.9
SKP1-211ENST00000523359 RPUSD1Q9UJJ7 312 aaKnown RBP3.21□□□□□ -1.9
SKP1-211ENST00000523359 RPL26L1Q9UNX3 145 aaKnown RBP3.21□□□□□ -1.9
SKP1-211ENST00000523359 CYSLTR1Q9Y271 337 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 ZFP30Q9Y2G7 519 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 TMEM2Q9UHN6 1383 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 CAMSAP2Q08AD1 1489 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 MBD5Q9P267 1494 aa3.21□□□□□ -1.9
SKP1-211ENST00000523359 DICER1Q9UPY3 1922 aaKnown RBP3.21□□□□□ -1.9
SKP1-211ENST00000523359 CPSF1Q10570 1443 aaKnown RBP3.2□□□□□ -1.9
SKP1-211ENST00000523359 NLRC5Q86WI3 1866 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 TRAV5A0A0B4J249 113 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 TRAV38-1A0A0B4J264 116 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 SMIM31A0A1B0GVY4 71 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 TRDV1A0A1B0GX56 115 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 TMEM72A0PK05 275 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 C20orf202A1L168 122 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 A6NDX4 124 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 A8MUN3 132 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 LST1O00453 97 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 DEDDO75618 318 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 LTAP01374 205 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 IFNA17P01571 189 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 OPN1SWP03999 348 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 FABP3P05413 133 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 CMPK1P30085 196 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 RPS10P46783 165 aaKnown RBP3.2□□□□□ -1.9
SKP1-211ENST00000523359 DEFA1P59665 94 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 RPS25P62851 125 aaKnown RBP3.2□□□□□ -1.9
SKP1-211ENST00000523359 PPP3R1P63098 170 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 SLC38A11Q08AI6 406 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 MRPL2Q5T653 305 aaKnown RBP3.2□□□□□ -1.9
SKP1-211ENST00000523359 HRCT1Q6UXD1 115 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 PRR15Q8IV56 129 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 TCTE3Q8IZS6 198 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 OR8I2Q8N0Y5 310 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 ACBD7Q8N6N7 88 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 Q8N9W7 124 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 OR4E2Q8NGC2 313 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 OR10D4PQ8NGN7 298 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 TP53RKQ96S44 253 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 HSD17B10Q99714 261 aaKnown RBP3.2□□□□□ -1.9
SKP1-211ENST00000523359 PRADC1Q9BSG0 188 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 SMIM3Q9BZL3 60 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 IMUPQ9GZP8 106 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 FBXL12Q9NXK8 326 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 TVP23BQ9NYZ1 205 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 ZNF492Q9P255 531 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 DNAJC12Q9UKB3 198 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 MYH7P12883 1935 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 ATG2AQ2TAZ0 1938 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 PKD1L2Q7Z442 2459 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 MED14O60244 1454 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 GRIN2AQ12879 1464 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 ABCC10Q5T3U5 1492 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 FYCO1Q9BQS8 1478 aa3.2□□□□□ -1.9
SKP1-211ENST00000523359 LRP4O75096 1905 aa3.19□□□□□ -1.9
SKP1-211ENST00000523359 DENND4CQ5VZ89 1909 aa3.19□□□□□ -1.9
SKP1-211ENST00000523359 TET2Q6N021 2002 aaPredicted RBP3.19□□□□□ -1.9
SKP1-211ENST00000523359 IGHV3-74A0A0B4J1X5 117 aa3.19□□□□□ -1.9
SKP1-211ENST00000523359 IGKV6-21A0A0C4DH24 114 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms