RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 COMMD5Q9GZQ3 224 aa13.58□□□□□ -0.24
SREK1-212ENST00000522912 COL12A1Q99715 3063 aa13.58□□□□□ -0.24
SREK1-212ENST00000522912 RBFOX3A6NFN3 312 aa13.57□□□□□ -0.24
SREK1-212ENST00000522912 CGB1A6NKQ9 187 aa13.57□□□□□ -0.24
SREK1-212ENST00000522912 EIF3GO75821 320 aaKnown RBP eCLIP13.57□□□□□ -0.24
SREK1-212ENST00000522912 PRTN3P24158 256 aa13.57□□□□□ -0.24
SREK1-212ENST00000522912 CNTFRP26992 372 aa13.57□□□□□ -0.24
SREK1-212ENST00000522912 LGALS7P47929 136 aa13.57□□□□□ -0.24
SREK1-212ENST00000522912 ARSJQ5FYB0 599 aaPredicted RBP13.57□□□□□ -0.24
SREK1-212ENST00000522912 FFAR4Q5NUL3 377 aa13.57□□□□□ -0.24
SREK1-212ENST00000522912 C10orf55Q5SWW7 151 aa13.57□□□□□ -0.24
SREK1-212ENST00000522912 LCN15Q6UWW0 184 aa13.57□□□□□ -0.24
SREK1-212ENST00000522912 ZNF843Q8N446 348 aa13.57□□□□□ -0.24
SREK1-212ENST00000522912 C1orf159Q96HA4 380 aa13.57□□□□□ -0.24
SREK1-212ENST00000522912 GOSR1O95249 250 aa13.57□□□□□ -0.24
SREK1-212ENST00000522912 IGHV4-39P01824 125 aa13.57□□□□□ -0.24
SREK1-212ENST00000522912 BSXQ3C1V8 233 aa13.57□□□□□ -0.24
SREK1-212ENST00000522912 SVBPQ8N300 66 aa13.57□□□□□ -0.24
SREK1-212ENST00000522912 ZNF709Q8N972 641 aa13.57□□□□□ -0.24
SREK1-212ENST00000522912 BPESC1Q9GZL8 116 aa13.57□□□□□ -0.24
SREK1-212ENST00000522912 A0A1W2PPI3 338 aa13.56□□□□□ -0.24
SREK1-212ENST00000522912 RNASE2P10153 161 aaKnown RBP13.56□□□□□ -0.24
SREK1-212ENST00000522912 FGF8P55075 233 aaPredicted RBP13.56□□□□□ -0.24
SREK1-212ENST00000522912 HAGHQ16775 308 aa13.56□□□□□ -0.24
SREK1-212ENST00000522912 TPTE2P1Q5T6R2 138 aa13.56□□□□□ -0.24
SREK1-212ENST00000522912 NKX6-2Q9C056 277 aaPredicted RBP13.56□□□□□ -0.24
SREK1-212ENST00000522912 ODF3BA8MYP8 253 aa13.56□□□□□ -0.24
SREK1-212ENST00000522912 CRYGBP07316 175 aa13.56□□□□□ -0.24
SREK1-212ENST00000522912 LMO4P61968 165 aa13.56□□□□□ -0.24
SREK1-212ENST00000522912 PAX2Q02962 417 aa13.56□□□□□ -0.24
SREK1-212ENST00000522912 C2orf83Q53S99 150 aa13.56□□□□□ -0.24
SREK1-212ENST00000522912 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.56□□□□□ -0.24
SREK1-212ENST00000522912 CLDND2Q8NHS1 167 aa13.56□□□□□ -0.24
SREK1-212ENST00000522912 SUN5Q8TC36 379 aa13.56□□□□□ -0.24
SREK1-212ENST00000522912 MGST2Q99735 147 aa13.56□□□□□ -0.24
SREK1-212ENST00000522912 MED13LQ71F56 2210 aa13.55□□□□□ -0.24
SREK1-212ENST00000522912 C17orf112F2Z3M2 114 aa13.55□□□□□ -0.24
SREK1-212ENST00000522912 M6PRP20645 277 aa13.55□□□□□ -0.24
SREK1-212ENST00000522912 HTR1DP28221 377 aa13.55□□□□□ -0.24
SREK1-212ENST00000522912 LCN2P80188 198 aa13.55□□□□□ -0.24
SREK1-212ENST00000522912 ZNF787Q6DD87 383 aa13.55□□□□□ -0.24
SREK1-212ENST00000522912 C1orf122Q6ZSJ8 110 aa13.55□□□□□ -0.24
SREK1-212ENST00000522912 KIR3DL3Q8N743 410 aa13.55□□□□□ -0.24
SREK1-212ENST00000522912 TEX45Q8NA69 505 aa13.55□□□□□ -0.24
SREK1-212ENST00000522912 NPVFQ9HCQ7 196 aa13.55□□□□□ -0.24
SREK1-212ENST00000522912 DPM3Q9P2X0 92 aa13.55□□□□□ -0.24
SREK1-212ENST00000522912 LSM4Q9Y4Z0 139 aaKnown RBP13.55□□□□□ -0.24
SREK1-212ENST00000522912 MAP1LC3B2A6NCE7 125 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 INS-IGF2F8WCM5 200 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 MPDU1O75352 247 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 MBP02144 154 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 ICAM4Q14773 271 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 PSG5Q15238 335 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 VMO1Q7Z5L0 202 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 LHFPL4Q7Z7J7 247 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 OR10G4Q8NGN3 311 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 OR10G9Q8NGN4 311 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 OR10G7Q8NGN6 311 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 MAP1LC3BQ9GZQ8 125 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 SLC35B3Q9H1N7 401 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 ASH1LQ9NR48 2969 aaKnown RBP13.54□□□□□ -0.24
SREK1-212ENST00000522912 SLC39A9Q9NUM3 307 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 KLF2Q9Y5W3 355 aaPredicted RBP13.54□□□□□ -0.24
SREK1-212ENST00000522912 WNK2Q9Y3S1 2297 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 TIMM23O14925 209 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 NPBWR1P48145 328 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 WT1-ASQ06250 92 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 ZNF506Q5JVG8 444 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 SPOCK3Q9BQ16 436 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 GGTLC1Q9BX51 225 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 SMDT1Q9H4I9 107 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 SLC25A22Q9H936 323 aa13.54□□□□□ -0.24
SREK1-212ENST00000522912 ZNF462Q96JM2 2506 aa13.53□□□□□ -0.24
SREK1-212ENST00000522912 NAV3Q8IVL0 2385 aa13.53□□□□□ -0.24
SREK1-212ENST00000522912 MYO18BQ8IUG5 2567 aa13.53□□□□□ -0.24
SREK1-212ENST00000522912 A0A1W2PRD5 423 aa13.53□□□□□ -0.24
SREK1-212ENST00000522912 A0A1W2PRF3 423 aa13.53□□□□□ -0.24
SREK1-212ENST00000522912 A0A1W2PRM7 423 aa13.53□□□□□ -0.24
SREK1-212ENST00000522912 PAX6P26367 422 aa13.53□□□□□ -0.24
SREK1-212ENST00000522912 ATP5IP56385 69 aaPredicted RBP13.53□□□□□ -0.24
SREK1-212ENST00000522912 ERHP84090 104 aaKnown RBP13.53□□□□□ -0.24
SREK1-212ENST00000522912 PRSS8Q16651 343 aa13.53□□□□□ -0.24
SREK1-212ENST00000522912 CCL19Q99731 98 aa13.53□□□□□ -0.24
SREK1-212ENST00000522912 UNKLQ9H9P5 680 aaKnown RBP13.53□□□□□ -0.24
SREK1-212ENST00000522912 SIGLEC9Q9Y336 463 aa13.53□□□□□ -0.24
SREK1-212ENST00000522912 HILPDAQ9Y5L2 63 aa13.53□□□□□ -0.24
SREK1-212ENST00000522912 KPTNQ9Y664 436 aa13.53□□□□□ -0.24
SREK1-212ENST00000522912 A0A1W2PN81 502 aa13.52□□□□□ -0.24
SREK1-212ENST00000522912 DNASE2O00115 360 aaPredicted RBP13.52□□□□□ -0.24
SREK1-212ENST00000522912 HMGB3O15347 200 aaKnown RBP13.52□□□□□ -0.24
SREK1-212ENST00000522912 YIF1AO95070 293 aa13.52□□□□□ -0.24
SREK1-212ENST00000522912 OR13C7P0DN81 318 aa13.52□□□□□ -0.24
SREK1-212ENST00000522912 DEFA4P12838 97 aa13.52□□□□□ -0.24
SREK1-212ENST00000522912 CHRNA7P36544 502 aa13.52□□□□□ -0.24
SREK1-212ENST00000522912 OPRK1P41145 380 aa13.52□□□□□ -0.24
SREK1-212ENST00000522912 GCSAMLQ5JQS6 135 aa13.52□□□□□ -0.24
SREK1-212ENST00000522912 FAM122CQ6P4D5 195 aa13.52□□□□□ -0.24
SREK1-212ENST00000522912 SIRPDQ9H106 197 aa13.52□□□□□ -0.24
SREK1-212ENST00000522912 GNG13Q9P2W3 67 aa13.52□□□□□ -0.24
SREK1-212ENST00000522912 IGHV2-70DA0A0C4DH43 119 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms