RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 CRIP2P52943 208 aaPredicted RBP12.79□□□□□ -0.36
LSM1-204ENST00000522515 H2BFSP57053 126 aa12.79□□□□□ -0.36
LSM1-204ENST00000522515 ECSCRQ19T08 205 aa12.79□□□□□ -0.36
LSM1-204ENST00000522515 KRTAP24-1Q3LI83 254 aa12.79□□□□□ -0.36
LSM1-204ENST00000522515 ASPHD1Q5U4P2 390 aa12.79□□□□□ -0.36
LSM1-204ENST00000522515 STPG2Q8N412 459 aa12.79□□□□□ -0.36
LSM1-204ENST00000522515 OR11H7Q8NGC8 314 aa12.79□□□□□ -0.36
LSM1-204ENST00000522515 OR4D5Q8NGN0 318 aa12.79□□□□□ -0.36
LSM1-204ENST00000522515 OR52E5Q8NH55 327 aa12.79□□□□□ -0.36
LSM1-204ENST00000522515 C2orf50Q96LR7 162 aa12.79□□□□□ -0.36
LSM1-204ENST00000522515 HSPB7Q9UBY9 170 aa12.79□□□□□ -0.36
LSM1-204ENST00000522515 TRAV41A0A0B4J266 112 aa12.78□□□□□ -0.36
LSM1-204ENST00000522515 SPCS3P61009 180 aa12.78□□□□□ -0.36
LSM1-204ENST00000522515 PRCDQ00LT1 54 aa12.78□□□□□ -0.36
LSM1-204ENST00000522515 TNFRSF9Q07011 255 aa12.78□□□□□ -0.36
LSM1-204ENST00000522515 AKIRIN2Q53H80 203 aa12.78□□□□□ -0.36
LSM1-204ENST00000522515 UNQ5815/PRO19632Q6UWF5 114 aa12.78□□□□□ -0.36
LSM1-204ENST00000522515 OR4F5Q8NH21 305 aa12.78□□□□□ -0.36
LSM1-204ENST00000522515 WDR89Q96FK6 387 aaPredicted RBP12.78□□□□□ -0.36
LSM1-204ENST00000522515 A0A1B0GVG6 124 aa12.77□□□□□ -0.36
LSM1-204ENST00000522515 IGLC7A0M8Q6 106 aa12.77□□□□□ -0.36
LSM1-204ENST00000522515 AREGP15514 252 aa12.77□□□□□ -0.36
LSM1-204ENST00000522515 MDKP21741 143 aaPredicted RBP12.77□□□□□ -0.36
LSM1-204ENST00000522515 ID3Q02535 119 aa12.77□□□□□ -0.36
LSM1-204ENST00000522515 WT1-ASQ06250 92 aa12.77□□□□□ -0.36
LSM1-204ENST00000522515 TMEM267Q0VDI3 215 aaPredicted RBP12.77□□□□□ -0.36
LSM1-204ENST00000522515 PDLIM3Q53GG5 364 aaPredicted RBP12.77□□□□□ -0.36
LSM1-204ENST00000522515 C19orf54Q5BKX5 351 aa12.77□□□□□ -0.36
LSM1-204ENST00000522515 ZNF580Q9UK33 172 aa12.77□□□□□ -0.36
LSM1-204ENST00000522515 FAM90A26D6RGX4 464 aa12.77□□□□□ -0.37
LSM1-204ENST00000522515 NKX2-1P43699 371 aaPredicted RBP12.77□□□□□ -0.37
LSM1-204ENST00000522515 IL15RAQ13261 267 aa12.77□□□□□ -0.37
LSM1-204ENST00000522515 C11orf87Q6NUJ2 197 aa12.77□□□□□ -0.37
LSM1-204ENST00000522515 WNT10AQ9GZT5 417 aa12.77□□□□□ -0.37
LSM1-204ENST00000522515 MAGT1Q9H0U3 335 aa12.77□□□□□ -0.37
LSM1-204ENST00000522515 RBKSQ9H477 322 aa12.77□□□□□ -0.37
LSM1-204ENST00000522515 PLEKHA3Q9HB20 300 aa12.77□□□□□ -0.37
LSM1-204ENST00000522515 hCG_2014768A0A024R1R8 64 aa12.76□□□□□ -0.37
LSM1-204ENST00000522515 CEBPZOSA8MTT3 80 aa12.76□□□□□ -0.37
LSM1-204ENST00000522515 SCGB1D2O95969 90 aa12.76□□□□□ -0.37
LSM1-204ENST00000522515 REG1AP05451 166 aa12.76□□□□□ -0.37
LSM1-204ENST00000522515 OR13C7P0DN81 318 aa12.76□□□□□ -0.37
LSM1-204ENST00000522515 PPIFP30405 207 aaKnown RBP12.76□□□□□ -0.37
LSM1-204ENST00000522515 HOXA1P49639 335 aaPredicted RBP12.76□□□□□ -0.37
LSM1-204ENST00000522515 CFHR3Q02985 330 aa12.76□□□□□ -0.37
LSM1-204ENST00000522515 C10orf99Q6UWK7 81 aa12.76□□□□□ -0.37
LSM1-204ENST00000522515 ZNF329Q86UD4 541 aa12.76□□□□□ -0.37
LSM1-204ENST00000522515 OR5T1Q8NG75 326 aa12.76□□□□□ -0.37
LSM1-204ENST00000522515 SRSF8Q9BRL6 282 aaKnown RBP12.76□□□□□ -0.37
LSM1-204ENST00000522515 CACFD1Q9UGQ2 172 aa12.76□□□□□ -0.37
LSM1-204ENST00000522515 RNF114Q9Y508 228 aa12.76□□□□□ -0.37
LSM1-204ENST00000522515 A0A1W2PN81 502 aa12.75□□□□□ -0.37
LSM1-204ENST00000522515 CLPSL1A2RUU4 121 aa12.75□□□□□ -0.37
LSM1-204ENST00000522515 SOX15O60248 233 aa12.75□□□□□ -0.37
LSM1-204ENST00000522515 MBPP02686 304 aaPredicted RBP12.75□□□□□ -0.37
LSM1-204ENST00000522515 CHRNA7P36544 502 aa12.75□□□□□ -0.37
LSM1-204ENST00000522515 POLR2GP62487 172 aaKnown RBP eCLIP12.75□□□□□ -0.37
LSM1-204ENST00000522515 C19orf35Q6ZS72 473 aa12.75□□□□□ -0.37
LSM1-204ENST00000522515 DTD1Q8TEA8 209 aa12.75□□□□□ -0.37
LSM1-204ENST00000522515 TMEM68Q96MH6 324 aa12.75□□□□□ -0.37
LSM1-204ENST00000522515 NMES1Q9C002 83 aa12.75□□□□□ -0.37
LSM1-204ENST00000522515 SYNGR2O43760 224 aa12.74□□□□□ -0.37
LSM1-204ENST00000522515 HSD17B13Q7Z5P4 300 aaPredicted RBP12.74□□□□□ -0.37
LSM1-204ENST00000522515 CENPVQ7Z7K6 275 aaPredicted RBP12.74□□□□□ -0.37
LSM1-204ENST00000522515 TTC9CQ8N5M4 171 aa12.74□□□□□ -0.37
LSM1-204ENST00000522515 KLHDC1Q8N7A1 406 aa12.74□□□□□ -0.37
LSM1-204ENST00000522515 GON7Q9BXV9 100 aa12.74□□□□□ -0.37
LSM1-204ENST00000522515 HEYLQ9NQ87 328 aaPredicted RBP12.74□□□□□ -0.37
LSM1-204ENST00000522515 ATRQ13535 2644 aa12.74□□□□□ -0.37
LSM1-204ENST00000522515 TMEM89A2RUT3 159 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 PSMB11A5LHX3 300 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 NPIPB5A8MRT5 1133 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 INS-IGF2F8WCM5 200 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 HAX1O00165 279 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 CTRB1P17538 263 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 PSMB6P28072 239 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 PROK1P58294 105 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 CYCSP99999 105 aaKnown RBP12.73□□□□□ -0.37
LSM1-204ENST00000522515 SRSF4Q08170 494 aaKnown RBP12.73□□□□□ -0.37
LSM1-204ENST00000522515 FOXL1Q12952 345 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 RAB32Q13637 225 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 CTRB2Q6GPI1 263 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 OR2C3Q8N628 320 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 FAM110DQ8TAY7 271 aaPredicted RBP12.73□□□□□ -0.37
LSM1-204ENST00000522515 CHAC2Q8WUX2 184 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 ZNF436Q9C0F3 470 aaPredicted RBP12.73□□□□□ -0.37
LSM1-204ENST00000522515 ENY2Q9NPA8 101 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 FBN1P35555 2871 aaKnown RBP12.73□□□□□ -0.37
LSM1-204ENST00000522515 A0A1B0GUS0 222 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 K7EPK0 472 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 WRBO00258 174 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 FBXO24O75426 580 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 MED6O75586 246 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 CRYGCP07315 174 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 IAPPP10997 89 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 ERHP84090 104 aaKnown RBP12.73□□□□□ -0.37
LSM1-204ENST00000522515 WIPF2Q8TF74 440 aaPredicted RBP12.73□□□□□ -0.37
LSM1-204ENST00000522515 C19orf24Q9BVV8 132 aa12.73□□□□□ -0.37
LSM1-204ENST00000522515 RCL1Q9Y2P8 373 aaKnown RBP12.73□□□□□ -0.37
LSM1-204ENST00000522515 LSM5Q9Y4Y9 91 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms